RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 LEPP41159 167 aa12.62□□□□□ -0.39
TRAPPC3-209ENST00000616395 ATP5L2Q7Z4Y8 100 aa12.62□□□□□ -0.39
TRAPPC3-209ENST00000616395 Q8TAT8 98 aa12.62□□□□□ -0.39
TRAPPC3-209ENST00000616395 DEFB131BA0A096LNP1 70 aa12.61□□□□□ -0.39
TRAPPC3-209ENST00000616395 SH2D1AO60880 128 aa12.61□□□□□ -0.39
TRAPPC3-209ENST00000616395 C20orf173Q96LM9 149 aa12.61□□□□□ -0.39
TRAPPC3-209ENST00000616395 C8orf49Q96NF6 230 aa12.61□□□□□ -0.39
TRAPPC3-209ENST00000616395 ODF3Q96PU9 254 aa12.61□□□□□ -0.39
TRAPPC3-209ENST00000616395 LRP1BQ9NZR2 4599 aa12.6□□□□□ -0.39
TRAPPC3-209ENST00000616395 A0A1B0GW15 77 aa12.6□□□□□ -0.39
TRAPPC3-209ENST00000616395 DEFB131AP59861 70 aa12.6□□□□□ -0.39
TRAPPC3-209ENST00000616395 FOXI2Q6ZQN5 318 aa12.6□□□□□ -0.39
TRAPPC3-209ENST00000616395 NDUFAF3Q9BU61 184 aa12.6□□□□□ -0.39
TRAPPC3-209ENST00000616395 TRAPPC1Q9Y5R8 145 aa12.6□□□□□ -0.39
TRAPPC3-209ENST00000616395 TRAV21A0A0B4J279 112 aa12.59□□□□□ -0.39
TRAPPC3-209ENST00000616395 HIGD1CA8MV81 97 aa12.59□□□□□ -0.39
TRAPPC3-209ENST00000616395 ORM1P02763 201 aa12.59□□□□□ -0.39
TRAPPC3-209ENST00000616395 GPX1P07203 203 aa12.59□□□□□ -0.39
TRAPPC3-209ENST00000616395 TCL1AP56279 114 aa12.59□□□□□ -0.39
TRAPPC3-209ENST00000616395 NEU1Q99519 415 aa12.59□□□□□ -0.39
TRAPPC3-209ENST00000616395 APOBP04114 4563 aaKnown RBP12.58□□□□□ -0.4
TRAPPC3-209ENST00000616395 HLA-DQA1P01909 254 aa12.58□□□□□ -0.4
TRAPPC3-209ENST00000616395 MIFP14174 115 aa12.58□□□□□ -0.4
TRAPPC3-209ENST00000616395 RIGQ13278 110 aa12.58□□□□□ -0.4
TRAPPC3-209ENST00000616395 C1orf134Q5TEV5 83 aa12.58□□□□□ -0.4
TRAPPC3-209ENST00000616395 FRZBQ92765 325 aa12.58□□□□□ -0.4
TRAPPC3-209ENST00000616395 GNB1LQ9BYB4 327 aa12.58□□□□□ -0.4
TRAPPC3-209ENST00000616395 AGRNO00468 2067 aa12.57□□□□□ -0.4
TRAPPC3-209ENST00000616395 RAB4BP61018 213 aa12.57□□□□□ -0.4
TRAPPC3-209ENST00000616395 C12orf74Q32Q52 190 aa12.57□□□□□ -0.4
TRAPPC3-209ENST00000616395 CELA1Q9UNI1 258 aa12.57□□□□□ -0.4
TRAPPC3-209ENST00000616395 A0A0J9YX75 114 aa12.56□□□□□ -0.4
TRAPPC3-209ENST00000616395 CRISP2P16562 243 aa12.56□□□□□ -0.4
TRAPPC3-209ENST00000616395 FOXA3P55318 350 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC3-209ENST00000616395 TNP2Q05952 138 aa12.56□□□□□ -0.4
TRAPPC3-209ENST00000616395 UBE2DNLQ8IWF7 75 aa12.56□□□□□ -0.4
TRAPPC3-209ENST00000616395 NUP35Q8NFH5 326 aa12.56□□□□□ -0.4
TRAPPC3-209ENST00000616395 X6R8D5 127 aa12.56□□□□□ -0.4
TRAPPC3-209ENST00000616395 KNCNA6PVL3 124 aa12.55□□□□□ -0.4
TRAPPC3-209ENST00000616395 F2Z2F3 143 aa12.55□□□□□ -0.4
TRAPPC3-209ENST00000616395 TRGC2P03986 189 aa12.55□□□□□ -0.4
TRAPPC3-209ENST00000616395 GIG44P09565 113 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC3-209ENST00000616395 HBBP68871 147 aa12.55□□□□□ -0.4
TRAPPC3-209ENST00000616395 A0A1B0GUT8 65 aa12.54□□□□□ -0.4
TRAPPC3-209ENST00000616395 SNURFLB1AK76 121 aa12.54□□□□□ -0.4
TRAPPC3-209ENST00000616395 CRIP1P50238 77 aa12.54□□□□□ -0.4
TRAPPC3-209ENST00000616395 LINC01559Q495D7 138 aa12.54□□□□□ -0.4
TRAPPC3-209ENST00000616395 MRPL54Q6P161 138 aaKnown RBP12.54□□□□□ -0.4
TRAPPC3-209ENST00000616395 KCNS1Q96KK3 526 aa12.54□□□□□ -0.4
TRAPPC3-209ENST00000616395 PGLYRP4Q96LB8 373 aa12.54□□□□□ -0.4
TRAPPC3-209ENST00000616395 ZNF705DP0CH99 300 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC3-209ENST00000616395 ZNF705BP0CI00 300 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC3-209ENST00000616395 DEFB1P60022 68 aa12.53□□□□□ -0.4
TRAPPC3-209ENST00000616395 ACTL10Q5JWF8 245 aa12.53□□□□□ -0.4
TRAPPC3-209ENST00000616395 FER1L6-AS1Q8NA97 138 aa12.53□□□□□ -0.4
TRAPPC3-209ENST00000616395 F6UB75 175 aa12.52□□□□□ -0.41
TRAPPC3-209ENST00000616395 SPINK4O60575 86 aa12.52□□□□□ -0.41
TRAPPC3-209ENST00000616395 PRB4P10163 310 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC3-209ENST00000616395 FABP9Q0Z7S8 132 aa12.52□□□□□ -0.41
TRAPPC3-209ENST00000616395 SMIM15Q7Z3B0 74 aa12.52□□□□□ -0.41
TRAPPC3-209ENST00000616395 FAM19A4Q96LR4 140 aa12.52□□□□□ -0.41
TRAPPC3-209ENST00000616395 TPPP3Q9BW30 176 aa12.52□□□□□ -0.41
TRAPPC3-209ENST00000616395 DMBT1Q9UGM3 2413 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC3-209ENST00000616395 TMSB15BA0A087X1C1 80 aa12.51□□□□□ -0.41
TRAPPC3-209ENST00000616395 HLA-DRB4P13762 266 aa12.51□□□□□ -0.41
TRAPPC3-209ENST00000616395 RNASE4P34096 147 aaKnown RBP12.51□□□□□ -0.41
TRAPPC3-209ENST00000616395 CDKN1BP46527 198 aa12.51□□□□□ -0.41
TRAPPC3-209ENST00000616395 NUTF2P61970 127 aaKnown RBP12.51□□□□□ -0.41
TRAPPC3-209ENST00000616395 FAM159AQ6UWV7 190 aa12.51□□□□□ -0.41
TRAPPC3-209ENST00000616395 STHQ8IWL8 128 aa12.51□□□□□ -0.41
TRAPPC3-209ENST00000616395 ZFP82Q8N141 532 aa12.51□□□□□ -0.41
TRAPPC3-209ENST00000616395 MRPL18Q9H0U6 180 aaKnown RBP12.51□□□□□ -0.41
TRAPPC3-209ENST00000616395 HLA-DRB4X5D2U9 266 aa12.51□□□□□ -0.41
TRAPPC3-209ENST00000616395 C7orf71A4D174 169 aa12.5□□□□□ -0.41
TRAPPC3-209ENST00000616395 APCSP02743 223 aa12.5□□□□□ -0.41
TRAPPC3-209ENST00000616395 S100A4P26447 101 aaKnown RBP12.5□□□□□ -0.41
TRAPPC3-209ENST00000616395 ZNF80P51504 273 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC3-209ENST00000616395 ZFAND2AQ8N6M9 145 aa12.5□□□□□ -0.41
TRAPPC3-209ENST00000616395 J3KRW8 73 aa12.49□□□□□ -0.41
TRAPPC3-209ENST00000616395 TRGC1P0CF51 173 aa12.49□□□□□ -0.41
TRAPPC3-209ENST00000616395 ASIPP42127 132 aa12.49□□□□□ -0.41
TRAPPC3-209ENST00000616395 CAMPP49913 170 aa12.49□□□□□ -0.41
TRAPPC3-209ENST00000616395 TRPT1Q86TN4 253 aaKnown RBP12.49□□□□□ -0.41
TRAPPC3-209ENST00000616395 GTSF1Q8WW33 167 aa12.49□□□□□ -0.41
TRAPPC3-209ENST00000616395 CLUHP3Q96NS8 147 aa12.49□□□□□ -0.41
TRAPPC3-209ENST00000616395 NAGKQ9UJ70 344 aa12.49□□□□□ -0.41
TRAPPC3-209ENST00000616395 KLLNB2CW77 178 aa12.48□□□□□ -0.41
TRAPPC3-209ENST00000616395 CACNG7P62955 275 aa12.48□□□□□ -0.41
TRAPPC3-209ENST00000616395 DNAH5Q8TE73 4624 aa12.48□□□□□ -0.41
TRAPPC3-209ENST00000616395 IGKV3-20P01619 116 aa12.47□□□□□ -0.41
TRAPPC3-209ENST00000616395 GZMBP10144 247 aa12.47□□□□□ -0.41
TRAPPC3-209ENST00000616395 CTRLP40313 264 aa12.47□□□□□ -0.41
TRAPPC3-209ENST00000616395 GDF5OSQ5U4N7 250 aa12.47□□□□□ -0.41
TRAPPC3-209ENST00000616395 MORN3Q6PF18 240 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC3-209ENST00000616395 LYZL1Q6UWQ5 148 aa12.47□□□□□ -0.41
TRAPPC3-209ENST00000616395 TMEM136Q6ZRR5 245 aa12.47□□□□□ -0.41
TRAPPC3-209ENST00000616395 A0A1B0GXF2 115 aa12.46□□□□□ -0.41
TRAPPC3-209ENST00000616395 H3BMM0 161 aa12.46□□□□□ -0.41
TRAPPC3-209ENST00000616395 NDUFA6P56556 154 aa12.46□□□□□ -0.41
TRAPPC3-209ENST00000616395 CSNK1G2-AS1Q8NCQ2 148 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 225.1 ms