RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 SPRY2O43597 315 aa7.42□□□□□ -1.22
AL353770.3-201ENST00000616253 FAM159AQ6UWV7 190 aa7.42□□□□□ -1.22
AL353770.3-201ENST00000616253 Q6ZWC4 215 aa7.42□□□□□ -1.22
AL353770.3-201ENST00000616253 NIT1Q86X76 327 aa7.42□□□□□ -1.22
AL353770.3-201ENST00000616253 FAM19A2Q8N3H0 131 aa7.42□□□□□ -1.22
AL353770.3-201ENST00000616253 U3KQK5 164 aa7.42□□□□□ -1.22
AL353770.3-201ENST00000616253 SMKR1H3BMG3 65 aa7.41□□□□□ -1.22
AL353770.3-201ENST00000616253 H3BMM0 161 aa7.41□□□□□ -1.22
AL353770.3-201ENST00000616253 SAP30O75446 220 aa7.41□□□□□ -1.22
AL353770.3-201ENST00000616253 HSBP1O75506 76 aa7.41□□□□□ -1.22
AL353770.3-201ENST00000616253 MED14OSP0DP75 135 aa7.41□□□□□ -1.22
AL353770.3-201ENST00000616253 FXYD7P58549 80 aa7.41□□□□□ -1.22
AL353770.3-201ENST00000616253 PKIAP61925 76 aa7.41□□□□□ -1.22
AL353770.3-201ENST00000616253 JOSD1Q15040 202 aaPredicted RBP7.41□□□□□ -1.22
AL353770.3-201ENST00000616253 ORMDL3Q8N138 153 aa7.41□□□□□ -1.22
AL353770.3-201ENST00000616253 RNF185Q96GF1 192 aa7.41□□□□□ -1.22
AL353770.3-201ENST00000616253 PRELID3AQ96N28 172 aa7.41□□□□□ -1.22
AL353770.3-201ENST00000616253 RBMY1BA6NDE4 496 aaKnown RBP7.4□□□□□ -1.22
AL353770.3-201ENST00000616253 RBMY1EA6NEQ0 496 aaKnown RBP7.4□□□□□ -1.22
AL353770.3-201ENST00000616253 A8MTW9 85 aa7.4□□□□□ -1.22
AL353770.3-201ENST00000616253 M0R381 172 aa7.4□□□□□ -1.22
AL353770.3-201ENST00000616253 NCR2O95944 276 aa7.4□□□□□ -1.22
AL353770.3-201ENST00000616253 RBMY1DP0C7P1 496 aaKnown RBP7.4□□□□□ -1.22
AL353770.3-201ENST00000616253 RNASE3P12724 160 aaKnown RBP7.4□□□□□ -1.22
AL353770.3-201ENST00000616253 EVI2AP22794 236 aa7.4□□□□□ -1.22
AL353770.3-201ENST00000616253 CKS2P33552 79 aa7.4□□□□□ -1.22
AL353770.3-201ENST00000616253 ODF3L2Q3SX64 289 aa7.4□□□□□ -1.22
AL353770.3-201ENST00000616253 C14orf144Q96I85 54 aa7.4□□□□□ -1.22
AL353770.3-201ENST00000616253 C2orf88Q9BSF0 95 aa7.4□□□□□ -1.22
AL353770.3-201ENST00000616253 SCRT2Q9NQ03 307 aa7.4□□□□□ -1.22
AL353770.3-201ENST00000616253 PHLDA3Q9Y5J5 127 aa7.4□□□□□ -1.22
AL353770.3-201ENST00000616253 NIPBLQ6KC79 2804 aaeCLIP7.4□□□□□ -1.22
AL353770.3-201ENST00000616253 MUC4Q99102 2169 aa7.4□□□□□ -1.23
AL353770.3-201ENST00000616253 CD7P09564 240 aa7.4□□□□□ -1.23
AL353770.3-201ENST00000616253 TDRG1Q3Y452 100 aa7.4□□□□□ -1.23
AL353770.3-201ENST00000616253 SMIM15Q7Z3B0 74 aa7.4□□□□□ -1.23
AL353770.3-201ENST00000616253 CHCHD1Q96BP2 118 aaKnown RBP7.4□□□□□ -1.23
AL353770.3-201ENST00000616253 A0A1B0GV90 55 aa7.39□□□□□ -1.23
AL353770.3-201ENST00000616253 LINC00614P0C842 121 aa7.39□□□□□ -1.23
AL353770.3-201ENST00000616253 IGHV1OR15-1A0A075B7D0 117 aa7.39□□□□□ -1.23
AL353770.3-201ENST00000616253 NPYP01303 97 aa7.39□□□□□ -1.23
AL353770.3-201ENST00000616253 PF4P02776 101 aa7.39□□□□□ -1.23
AL353770.3-201ENST00000616253 PMCHL1Q16048 86 aa7.39□□□□□ -1.23
AL353770.3-201ENST00000616253 PRIMA1Q86XR5 153 aa7.39□□□□□ -1.23
AL353770.3-201ENST00000616253 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.39□□□□□ -1.23
AL353770.3-201ENST00000616253 IGHV1-24A0A0C4DH33 117 aa7.38□□□□□ -1.23
AL353770.3-201ENST00000616253 LOC389332A0A1B0GUA5 103 aa7.38□□□□□ -1.23
AL353770.3-201ENST00000616253 OR11H12B2RN74 326 aa7.38□□□□□ -1.23
AL353770.3-201ENST00000616253 CRXO43186 299 aaPredicted RBP7.38□□□□□ -1.23
AL353770.3-201ENST00000616253 GAS8-AS1O95177 125 aa7.38□□□□□ -1.23
AL353770.3-201ENST00000616253 SCGB1D1O95968 90 aa7.38□□□□□ -1.23
AL353770.3-201ENST00000616253 IGLV1-51P01701 117 aa7.38□□□□□ -1.23
AL353770.3-201ENST00000616253 PPBPP02775 128 aa7.38□□□□□ -1.23
AL353770.3-201ENST00000616253 RBMY1A1P0DJD3 496 aaKnown RBP7.38□□□□□ -1.23
AL353770.3-201ENST00000616253 RBMY1CP0DJD4 496 aa7.38□□□□□ -1.23
AL353770.3-201ENST00000616253 DDTP30046 118 aa7.38□□□□□ -1.23
AL353770.3-201ENST00000616253 RBMY1FQ15415 496 aaKnown RBP7.38□□□□□ -1.23
AL353770.3-201ENST00000616253 MDFIQ99750 246 aa7.38□□□□□ -1.23
AL353770.3-201ENST00000616253 IGHV3-16A0A0C4DH30 117 aa7.37□□□□□ -1.23
AL353770.3-201ENST00000616253 NXPH4O95158 308 aa7.37□□□□□ -1.23
AL353770.3-201ENST00000616253 IFI27P40305 119 aaPredicted RBP7.37□□□□□ -1.23
AL353770.3-201ENST00000616253 KRTDAPP60985 99 aa7.37□□□□□ -1.23
AL353770.3-201ENST00000616253 FA2HQ7L5A8 372 aa7.37□□□□□ -1.23
AL353770.3-201ENST00000616253 Q8N1Y9 231 aa7.37□□□□□ -1.23
AL353770.3-201ENST00000616253 PRSS3P2Q8NHM4 247 aa7.37□□□□□ -1.23
AL353770.3-201ENST00000616253 TRAV26-2A0A0B4J265 109 aa7.37□□□□□ -1.23
AL353770.3-201ENST00000616253 GATA1P15976 413 aaPredicted RBP7.37□□□□□ -1.23
AL353770.3-201ENST00000616253 ANKRD39Q53RE8 183 aa7.37□□□□□ -1.23
AL353770.3-201ENST00000616253 LINC00482Q8N8I6 264 aa7.37□□□□□ -1.23
AL353770.3-201ENST00000616253 C9orf85Q96MD7 179 aa7.37□□□□□ -1.23
AL353770.3-201ENST00000616253 AP1S3Q96PC3 154 aa7.37□□□□□ -1.23
AL353770.3-201ENST00000616253 AP5S1Q9NUS5 200 aa7.37□□□□□ -1.23
AL353770.3-201ENST00000616253 MDFICQ9P1T7 246 aa7.37□□□□□ -1.23
AL353770.3-201ENST00000616253 JMJD1CQ15652 2540 aa7.36□□□□□ -1.23
AL353770.3-201ENST00000616253 TCAPO15273 167 aa7.36□□□□□ -1.23
AL353770.3-201ENST00000616253 TNFRSF6BO95407 300 aa7.36□□□□□ -1.23
AL353770.3-201ENST00000616253 STHQ8IWL8 128 aa7.36□□□□□ -1.23
AL353770.3-201ENST00000616253 C14orf178Q8N769 122 aaPredicted RBP7.36□□□□□ -1.23
AL353770.3-201ENST00000616253 OR2K2Q8NGT1 345 aa7.36□□□□□ -1.23
AL353770.3-201ENST00000616253 DPH3P1Q9H4G8 78 aa7.36□□□□□ -1.23
AL353770.3-201ENST00000616253 LAMTOR2Q9Y2Q5 125 aa7.36□□□□□ -1.23
AL353770.3-201ENST00000616253 TRGV11A0A075B6L2 103 aa7.35□□□□□ -1.23
AL353770.3-201ENST00000616253 CBY3A6NI87 242 aa7.35□□□□□ -1.23
AL353770.3-201ENST00000616253 C3orf79P0CE67 100 aa7.35□□□□□ -1.23
AL353770.3-201ENST00000616253 MAP1LC3AQ9H492 121 aa7.35□□□□□ -1.23
AL353770.3-201ENST00000616253 TENM1Q9UKZ4 2725 aa7.35□□□□□ -1.23
AL353770.3-201ENST00000616253 INSP01308 110 aa7.35□□□□□ -1.23
AL353770.3-201ENST00000616253 MGPP08493 103 aa7.35□□□□□ -1.23
AL353770.3-201ENST00000616253 TRPT1Q86TN4 253 aaKnown RBP7.35□□□□□ -1.23
AL353770.3-201ENST00000616253 MRAP2Q96G30 205 aa7.35□□□□□ -1.23
AL353770.3-201ENST00000616253 CLUHP3Q96NS8 147 aa7.35□□□□□ -1.23
AL353770.3-201ENST00000616253 HTN1P15515 57 aa7.34□□□□□ -1.23
AL353770.3-201ENST00000616253 BEAN1Q3B7T3 259 aa7.34□□□□□ -1.23
AL353770.3-201ENST00000616253 NRACQ8N912 160 aa7.34□□□□□ -1.23
AL353770.3-201ENST00000616253 JPT2Q9H910 190 aa7.34□□□□□ -1.23
AL353770.3-201ENST00000616253 ATRQ13535 2644 aa7.34□□□□□ -1.23
AL353770.3-201ENST00000616253 LEPROTL1O95214 131 aa7.33□□□□□ -1.24
AL353770.3-201ENST00000616253 CMC4P56277 68 aaPredicted RBP7.33□□□□□ -1.24
AL353770.3-201ENST00000616253 LINC00173Q6ZV60 143 aa7.33□□□□□ -1.24
AL353770.3-201ENST00000616253 Q8N976 141 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms