RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 PGPEP1Q9NXJ5 209 aa11.78□□□□□ -0.52
PRKN-209ENST00000612485 TRBV6-4A0A1B0GX49 114 aa11.77□□□□□ -0.53
PRKN-209ENST00000612485 RHOHQ15669 191 aa11.77□□□□□ -0.53
PRKN-209ENST00000612485 TCTE3Q8IZS6 198 aa11.77□□□□□ -0.53
PRKN-209ENST00000612485 SLC25A29Q8N8R3 303 aa11.77□□□□□ -0.53
PRKN-209ENST00000612485 BOLA1Q9Y3E2 137 aa11.77□□□□□ -0.53
PRKN-209ENST00000612485 TRAV34A0A0B4J273 112 aa11.76□□□□□ -0.53
PRKN-209ENST00000612485 KANTRA0A1W2PQU2 76 aa11.76□□□□□ -0.53
PRKN-209ENST00000612485 BCL2L11O43521 198 aa11.76□□□□□ -0.53
PRKN-209ENST00000612485 CRYGDP07320 174 aa11.76□□□□□ -0.53
PRKN-209ENST00000612485 UBE2G2P60604 165 aa11.76□□□□□ -0.53
PRKN-209ENST00000612485 ZNF506Q5JVG8 444 aa11.76□□□□□ -0.53
PRKN-209ENST00000612485 CDPF1Q6NVV7 123 aa11.76□□□□□ -0.53
PRKN-209ENST00000612485 DPPA3Q6W0C5 159 aa11.76□□□□□ -0.53
PRKN-209ENST00000612485 TMUB2Q71RG4 321 aa11.76□□□□□ -0.53
PRKN-209ENST00000612485 LINC00479Q96M42 142 aa11.76□□□□□ -0.53
PRKN-209ENST00000612485 ARL2-SNX15V9GYD0 113 aa11.76□□□□□ -0.53
PRKN-209ENST00000612485 IGHV3-73A0A0B4J1V6 119 aa11.75□□□□□ -0.53
PRKN-209ENST00000612485 PGPEP1LA6NFU8 196 aa11.75□□□□□ -0.53
PRKN-209ENST00000612485 FABP5P3A8MUU1 101 aa11.75□□□□□ -0.53
PRKN-209ENST00000612485 PEX7O00628 323 aa11.75□□□□□ -0.53
PRKN-209ENST00000612485 RNASE3P12724 160 aaKnown RBP11.75□□□□□ -0.53
PRKN-209ENST00000612485 S100A4P26447 101 aaKnown RBP11.75□□□□□ -0.53
PRKN-209ENST00000612485 HIST1H2BAQ96A08 127 aa11.75□□□□□ -0.53
PRKN-209ENST00000612485 ZNF471Q9BX82 626 aaPredicted RBP11.75□□□□□ -0.53
PRKN-209ENST00000612485 A0A087WTM6 91 aa11.74□□□□□ -0.53
PRKN-209ENST00000612485 TRAV8-6A0A0B4J262 113 aa11.74□□□□□ -0.53
PRKN-209ENST00000612485 IGHV3-38A0A0C4DH36 116 aa11.74□□□□□ -0.53
PRKN-209ENST00000612485 FAM74A7A6NL05 159 aa11.74□□□□□ -0.53
PRKN-209ENST00000612485 PFDN1O60925 122 aa11.74□□□□□ -0.53
PRKN-209ENST00000612485 MGST1P10620 155 aaKnown RBP11.74□□□□□ -0.53
PRKN-209ENST00000612485 FGF8P55075 233 aaPredicted RBP11.74□□□□□ -0.53
PRKN-209ENST00000612485 AKAP14Q86UN6 197 aa11.74□□□□□ -0.53
PRKN-209ENST00000612485 Q8N1X5 172 aa11.74□□□□□ -0.53
PRKN-209ENST00000612485 IGKV3D-20A0A0C4DH25 116 aa11.73□□□□□ -0.53
PRKN-209ENST00000612485 A0A1B0GVG6 124 aa11.73□□□□□ -0.53
PRKN-209ENST00000612485 MAP1LC3B2A6NCE7 125 aa11.73□□□□□ -0.53
PRKN-209ENST00000612485 ASIPP42127 132 aa11.73□□□□□ -0.53
PRKN-209ENST00000612485 LINC01556Q5JQF7 62 aa11.73□□□□□ -0.53
PRKN-209ENST00000612485 OR10J3Q5JRS4 329 aa11.73□□□□□ -0.53
PRKN-209ENST00000612485 PIK3CD-AS1Q5SR53 167 aa11.73□□□□□ -0.53
PRKN-209ENST00000612485 Q86TA4 180 aa11.73□□□□□ -0.53
PRKN-209ENST00000612485 MAP1LC3BQ9GZQ8 125 aa11.73□□□□□ -0.53
PRKN-209ENST00000612485 A8MWV9 139 aa11.72□□□□□ -0.53
PRKN-209ENST00000612485 C1QBP02746 253 aa11.72□□□□□ -0.53
PRKN-209ENST00000612485 LGALSLQ3ZCW2 172 aaPredicted RBP11.72□□□□□ -0.53
PRKN-209ENST00000612485 LELP1Q5T871 98 aa11.71□□□□□ -0.53
PRKN-209ENST00000612485 ZFP2Q6ZN57 461 aa11.71□□□□□ -0.53
PRKN-209ENST00000612485 STOML3Q8TAV4 291 aa11.71□□□□□ -0.53
PRKN-209ENST00000612485 PARLQ9H300 379 aa11.71□□□□□ -0.53
PRKN-209ENST00000612485 SCRT2Q9NQ03 307 aa11.71□□□□□ -0.53
PRKN-209ENST00000612485 ZFP30Q9Y2G7 519 aa11.71□□□□□ -0.53
PRKN-209ENST00000612485 B4DEV8 164 aa11.7□□□□□ -0.54
PRKN-209ENST00000612485 SEC11BP0C7V7 166 aa11.7□□□□□ -0.54
PRKN-209ENST00000612485 FHITP49789 147 aa11.7□□□□□ -0.54
PRKN-209ENST00000612485 UBE2G1P62253 170 aa11.7□□□□□ -0.54
PRKN-209ENST00000612485 EIF5AP63241 154 aaKnown RBP11.7□□□□□ -0.54
PRKN-209ENST00000612485 ATP6V0E2Q8NHE4 81 aa11.7□□□□□ -0.54
PRKN-209ENST00000612485 FMC1Q96HJ9 113 aa11.7□□□□□ -0.54
PRKN-209ENST00000612485 TCEAL7Q9BRU2 100 aa11.7□□□□□ -0.54
PRKN-209ENST00000612485 GTSF1LQ9H1H1 148 aa11.7□□□□□ -0.54
PRKN-209ENST00000612485 IL36BQ9NZH7 164 aa11.7□□□□□ -0.54
PRKN-209ENST00000612485 PSCAO43653 123 aa11.69□□□□□ -0.54
PRKN-209ENST00000612485 TPT1P13693 172 aaKnown RBP11.69□□□□□ -0.54
PRKN-209ENST00000612485 FUSP35637 526 aaKnown RBP eCLIP11.69□□□□□ -0.54
PRKN-209ENST00000612485 COX8CQ7Z4L0 72 aa11.69□□□□□ -0.54
PRKN-209ENST00000612485 ZC2HC1AQ96GY0 325 aa11.69□□□□□ -0.54
PRKN-209ENST00000612485 IBA57-AS1B1ANH7 110 aa11.68□□□□□ -0.54
PRKN-209ENST00000612485 H3BVH4 76 aa11.68□□□□□ -0.54
PRKN-209ENST00000612485 DNLZQ5SXM8 178 aa11.68□□□□□ -0.54
PRKN-209ENST00000612485 FAM162BQ5T6X4 162 aa11.68□□□□□ -0.54
PRKN-209ENST00000612485 CST9LP1Q5W188 147 aa11.68□□□□□ -0.54
PRKN-209ENST00000612485 SYT8Q8NBV8 401 aa11.68□□□□□ -0.54
PRKN-209ENST00000612485 TRBV6-1A0A0K0K1D8 114 aa11.67□□□□□ -0.54
PRKN-209ENST00000612485 KRBOX1C9JBD0 128 aa11.67□□□□□ -0.54
PRKN-209ENST00000612485 SH2D1AO60880 128 aa11.67□□□□□ -0.54
PRKN-209ENST00000612485 CRIP1P50238 77 aa11.67□□□□□ -0.54
PRKN-209ENST00000612485 FAM213BQ8TBF2 198 aa11.67□□□□□ -0.54
PRKN-209ENST00000612485 GAGE12JA6NER3 117 aa11.66□□□□□ -0.54
PRKN-209ENST00000612485 UMAD1C9J7I0 102 aa11.66□□□□□ -0.54
PRKN-209ENST00000612485 M0R036 132 aa11.66□□□□□ -0.54
PRKN-209ENST00000612485 RHODO00212 210 aa11.66□□□□□ -0.54
PRKN-209ENST00000612485 IGHV3-30P01768 117 aa11.66□□□□□ -0.54
PRKN-209ENST00000612485 IGHV3-33P01772 117 aa11.66□□□□□ -0.54
PRKN-209ENST00000612485 ARMS2P0C7Q2 107 aa11.66□□□□□ -0.54
PRKN-209ENST00000612485 IGHV3-30-3P0DP02 117 aa11.66□□□□□ -0.54
PRKN-209ENST00000612485 IGHV3-30-5P0DP03 117 aa11.66□□□□□ -0.54
PRKN-209ENST00000612485 GAGE1Q13065 139 aa11.66□□□□□ -0.54
PRKN-209ENST00000612485 GAGE4Q13068 117 aa11.66□□□□□ -0.54
PRKN-209ENST00000612485 GAGE5Q13069 117 aa11.66□□□□□ -0.54
PRKN-209ENST00000612485 GAGE13Q4V321 117 aa11.66□□□□□ -0.54
PRKN-209ENST00000612485 Q6ZSN1 163 aa11.66□□□□□ -0.54
PRKN-209ENST00000612485 LTAP01374 205 aa11.65□□□□□ -0.54
PRKN-209ENST00000612485 AKR1C3P42330 323 aa11.65□□□□□ -0.54
PRKN-209ENST00000612485 ZNF674Q2M3X9 581 aa11.65□□□□□ -0.54
PRKN-209ENST00000612485 DMRTA1Q5VZB9 504 aa11.65□□□□□ -0.54
PRKN-209ENST00000612485 UFSP1Q6NVU6 142 aa11.65□□□□□ -0.54
PRKN-209ENST00000612485 SFT2D1Q8WV19 159 aa11.65□□□□□ -0.54
PRKN-209ENST00000612485 JPT2Q9H910 190 aa11.65□□□□□ -0.54
PRKN-209ENST00000612485 Q9HAA7 133 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms