RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 SUMO2P61956 95 aaKnown RBP10.67□□□□□ -0.7
COL6A1-207ENST00000612273 OR11H1Q8NG94 326 aa10.67□□□□□ -0.7
COL6A1-207ENST00000612273 OR11H2Q8NH07 326 aa10.67□□□□□ -0.7
COL6A1-207ENST00000612273 ZNF479Q96JC4 524 aa10.67□□□□□ -0.7
COL6A1-207ENST00000612273 SIVA1O15304 175 aa10.66□□□□□ -0.7
COL6A1-207ENST00000612273 ETDBQ3ZM63 59 aa10.66□□□□□ -0.7
COL6A1-207ENST00000612273 CHTOPQ9Y3Y2 248 aaKnown RBP10.66□□□□□ -0.7
COL6A1-207ENST00000612273 ASIPP42127 132 aa10.66□□□□□ -0.7
COL6A1-207ENST00000612273 RASL10AQ92737 203 aa10.66□□□□□ -0.7
COL6A1-207ENST00000612273 A0A087WX48 190 aa10.66□□□□□ -0.7
COL6A1-207ENST00000612273 C2orf66Q6UXQ4 117 aa10.66□□□□□ -0.7
COL6A1-207ENST00000612273 PSMG3-AS1Q96PY0 264 aa10.66□□□□□ -0.7
COL6A1-207ENST00000612273 GTSF1LQ9H1H1 148 aa10.66□□□□□ -0.7
COL6A1-207ENST00000612273 IGHV4-61A0A0C4DH41 118 aa10.65□□□□□ -0.7
COL6A1-207ENST00000612273 C9orf47Q6ZRZ4 202 aa10.65□□□□□ -0.7
COL6A1-207ENST00000612273 GPHB5Q86YW7 130 aa10.65□□□□□ -0.7
COL6A1-207ENST00000612273 ZFAND2AQ8N6M9 145 aa10.65□□□□□ -0.7
COL6A1-207ENST00000612273 TRAV12-2A0A075B6T6 113 aa10.65□□□□□ -0.7
COL6A1-207ENST00000612273 RHPN1-AS1Q9BWJ2 59 aa10.65□□□□□ -0.7
COL6A1-207ENST00000612273 ZMAT4Q9H898 229 aa10.65□□□□□ -0.7
COL6A1-207ENST00000612273 TRAV12-3A0A0B4J271 114 aa10.64□□□□□ -0.71
COL6A1-207ENST00000612273 RBAKDNA6NC62 111 aa10.64□□□□□ -0.71
COL6A1-207ENST00000612273 RPL39P62891 51 aaKnown RBP10.64□□□□□ -0.71
COL6A1-207ENST00000612273 MOB4Q9Y3A3 225 aa10.64□□□□□ -0.71
COL6A1-207ENST00000612273 DUSP14O95147 198 aaKnown RBP10.64□□□□□ -0.71
COL6A1-207ENST00000612273 APOMO95445 188 aa10.64□□□□□ -0.71
COL6A1-207ENST00000612273 IGHV4-39P01824 125 aa10.64□□□□□ -0.71
COL6A1-207ENST00000612273 GNLYP22749 145 aa10.64□□□□□ -0.71
COL6A1-207ENST00000612273 SRSF9Q13242 221 aaKnown RBP eCLIP10.64□□□□□ -0.71
COL6A1-207ENST00000612273 C10orf99Q6UWK7 81 aa10.64□□□□□ -0.71
COL6A1-207ENST00000612273 DUX5Q96PT3 197 aa10.64□□□□□ -0.71
COL6A1-207ENST00000612273 SPOCK3Q9BQ16 436 aa10.64□□□□□ -0.71
COL6A1-207ENST00000612273 ZNF256Q9Y2P7 627 aaPredicted RBP10.64□□□□□ -0.71
COL6A1-207ENST00000612273 C12orf74Q32Q52 190 aa10.64□□□□□ -0.71
COL6A1-207ENST00000612273 MAPK1IP1LQ8NDC0 245 aa10.64□□□□□ -0.71
COL6A1-207ENST00000612273 NRGNQ92686 78 aa10.64□□□□□ -0.71
COL6A1-207ENST00000612273 TRAV21A0A0B4J279 112 aa10.63□□□□□ -0.71
COL6A1-207ENST00000612273 G3V4G9 280 aa10.63□□□□□ -0.71
COL6A1-207ENST00000612273 LINC00477Q96M19 166 aa10.63□□□□□ -0.71
COL6A1-207ENST00000612273 NAV2Q8IVL1 2488 aa10.63□□□□□ -0.71
COL6A1-207ENST00000612273 IGHV3-64A0A075B6Q5 118 aa10.63□□□□□ -0.71
COL6A1-207ENST00000612273 LOC107984156A0A0G2JMH3 177 aa10.63□□□□□ -0.71
COL6A1-207ENST00000612273 PRSS29PA6NIE9 313 aa10.63□□□□□ -0.71
COL6A1-207ENST00000612273 ZNF688P0C7X2 276 aa10.63□□□□□ -0.71
COL6A1-207ENST00000612273 SLC25A16P16260 332 aa10.63□□□□□ -0.71
COL6A1-207ENST00000612273 ARL17AQ8IVW1 177 aa10.63□□□□□ -0.71
COL6A1-207ENST00000612273 ZNF815PA8K554 130 aa10.62□□□□□ -0.71
COL6A1-207ENST00000612273 IGLL5B9A064 214 aa10.62□□□□□ -0.71
COL6A1-207ENST00000612273 F8VRH5 84 aa10.62□□□□□ -0.71
COL6A1-207ENST00000612273 H7C1H1 209 aa10.62□□□□□ -0.71
COL6A1-207ENST00000612273 CD7P09564 240 aa10.62□□□□□ -0.71
COL6A1-207ENST00000612273 C9orf139Q6ZV77 190 aa10.62□□□□□ -0.71
COL6A1-207ENST00000612273 PRADC1Q9BSG0 188 aa10.62□□□□□ -0.71
COL6A1-207ENST00000612273 EPG5Q9HCE0 2579 aa10.62□□□□□ -0.71
COL6A1-207ENST00000612273 MUC4Q99102 2169 aa10.62□□□□□ -0.71
COL6A1-207ENST00000612273 HLA-DRB4P13762 266 aa10.62□□□□□ -0.71
COL6A1-207ENST00000612273 SMAGPQ0VAQ4 97 aa10.62□□□□□ -0.71
COL6A1-207ENST00000612273 OR5A1Q8NGJ0 315 aa10.62□□□□□ -0.71
COL6A1-207ENST00000612273 PIFOQ8TCI5 191 aa10.62□□□□□ -0.71
COL6A1-207ENST00000612273 HLA-DRB4X5D2U9 266 aa10.62□□□□□ -0.71
COL6A1-207ENST00000612273 DPH3P1Q9H4G8 78 aa10.62□□□□□ -0.71
COL6A1-207ENST00000612273 ARL6IP6Q8N6S5 226 aa10.61□□□□□ -0.71
COL6A1-207ENST00000612273 PLEKHB2Q96CS7 222 aa10.61□□□□□ -0.71
COL6A1-207ENST00000612273 SMPXQ9UHP9 88 aa10.61□□□□□ -0.71
COL6A1-207ENST00000612273 INSL3P51460 131 aa10.61□□□□□ -0.71
COL6A1-207ENST00000612273 HIST2H2BDQ6DRA6 164 aa10.61□□□□□ -0.71
COL6A1-207ENST00000612273 OPRPNQ99935 248 aaPredicted RBP10.61□□□□□ -0.71
COL6A1-207ENST00000612273 IGHV1-69DA0A0B4J2H0 117 aa10.6□□□□□ -0.71
COL6A1-207ENST00000612273 IGHV1-69P01742 117 aa10.6□□□□□ -0.71
COL6A1-207ENST00000612273 PHLDA1Q8WV24 401 aaPredicted RBP10.6□□□□□ -0.71
COL6A1-207ENST00000612273 TMEM190Q8WZ59 177 aa10.6□□□□□ -0.71
COL6A1-207ENST00000612273 JMJD1CQ15652 2540 aa10.6□□□□□ -0.71
COL6A1-207ENST00000612273 SRSF2Q01130 221 aaKnown RBP10.6□□□□□ -0.71
COL6A1-207ENST00000612273 TMEM170BQ5T4T1 132 aa10.6□□□□□ -0.71
COL6A1-207ENST00000612273 BAALCQ8WXS3 180 aa10.6□□□□□ -0.71
COL6A1-207ENST00000612273 TP53TG1Q9Y2A0 90 aa10.6□□□□□ -0.71
COL6A1-207ENST00000612273 PLNP26678 52 aa10.6□□□□□ -0.71
COL6A1-207ENST00000612273 FAM159AQ6UWV7 190 aa10.6□□□□□ -0.71
COL6A1-207ENST00000612273 MRPL16Q9NX20 251 aaKnown RBP10.6□□□□□ -0.71
COL6A1-207ENST00000612273 PGPEP1Q9NXJ5 209 aa10.6□□□□□ -0.71
COL6A1-207ENST00000612273 KLK9Q9UKQ9 250 aa10.6□□□□□ -0.71
COL6A1-207ENST00000612273 U3KQE9 123 aa10.6□□□□□ -0.71
COL6A1-207ENST00000612273 RNASE3P12724 160 aaKnown RBP10.59□□□□□ -0.71
COL6A1-207ENST00000612273 MYMXA0A1B0GTQ4 84 aa10.59□□□□□ -0.71
COL6A1-207ENST00000612273 ZNF418Q8TF45 676 aaPredicted RBP10.59□□□□□ -0.71
COL6A1-207ENST00000612273 ITLN2Q8WWU7 325 aaPredicted RBP10.59□□□□□ -0.71
COL6A1-207ENST00000612273 HIGD1BQ9P298 99 aa10.59□□□□□ -0.71
COL6A1-207ENST00000612273 TSSC4Q9Y5U2 329 aaPredicted RBP10.59□□□□□ -0.71
COL6A1-207ENST00000612273 ORMDL2Q53FV1 153 aa10.59□□□□□ -0.71
COL6A1-207ENST00000612273 MXRA5Q9NR99 2828 aa10.58□□□□□ -0.72
COL6A1-207ENST00000612273 FBN2P35556 2912 aa10.58□□□□□ -0.72
COL6A1-207ENST00000612273 ANKRD17O75179 2603 aaKnown RBP10.58□□□□□ -0.72
COL6A1-207ENST00000612273 IGHV3-73A0A0B4J1V6 119 aa10.58□□□□□ -0.72
COL6A1-207ENST00000612273 H7C2G1 150 aa10.58□□□□□ -0.72
COL6A1-207ENST00000612273 ATP5J2P56134 94 aa10.58□□□□□ -0.72
COL6A1-207ENST00000612273 PSMG4Q5JS54 123 aa10.58□□□□□ -0.72
COL6A1-207ENST00000612273 MRAP2Q96G30 205 aa10.58□□□□□ -0.72
COL6A1-207ENST00000612273 TM2D2Q9BX73 214 aa10.58□□□□□ -0.72
COL6A1-207ENST00000612273 LINC01549A6NIU2 74 aa10.58□□□□□ -0.72
COL6A1-207ENST00000612273 PRM2P04554 102 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms