RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 C11orf44Q8N8P7 122 aa4.88□□□□□ -1.63
SNX13-213ENST00000611725 SMAD5-AS1Q9Y6J3 95 aa4.88□□□□□ -1.63
SNX13-213ENST00000611725 ANKRD17O75179 2603 aaKnown RBP4.88□□□□□ -1.63
SNX13-213ENST00000611725 A6NDX4 124 aa4.88□□□□□ -1.63
SNX13-213ENST00000611725 DEFB131AP59861 70 aa4.88□□□□□ -1.63
SNX13-213ENST00000611725 SPINK13Q1W4C9 94 aa4.88□□□□□ -1.63
SNX13-213ENST00000611725 J3QLI3 93 aa4.88□□□□□ -1.63
SNX13-213ENST00000611725 CCL25O15444 150 aa4.88□□□□□ -1.63
SNX13-213ENST00000611725 RNASE8Q8TDE3 154 aaKnown RBP4.87□□□□□ -1.63
SNX13-213ENST00000611725 GNRH2O43555 120 aa4.87□□□□□ -1.63
SNX13-213ENST00000611725 CDKN1BP46527 198 aa4.87□□□□□ -1.63
SNX13-213ENST00000611725 BOD1L2Q8IYS8 172 aa4.87□□□□□ -1.63
SNX13-213ENST00000611725 Q5PR19 223 aa4.87□□□□□ -1.63
SNX13-213ENST00000611725 NEGR1Q7Z3B1 354 aa4.87□□□□□ -1.63
SNX13-213ENST00000611725 PRRC2AP48634 2157 aaKnown RBP4.87□□□□□ -1.63
SNX13-213ENST00000611725 IGHV1OR15-1A0A075B7D0 117 aa4.87□□□□□ -1.63
SNX13-213ENST00000611725 LINC01587Q99440 93 aa4.87□□□□□ -1.63
SNX13-213ENST00000611725 VCX2Q9H322 139 aa4.87□□□□□ -1.63
SNX13-213ENST00000611725 C11orf21Q9P2W6 132 aa4.87□□□□□ -1.63
SNX13-213ENST00000611725 TRBV7-9A0A0J9YWB2 115 aa4.87□□□□□ -1.63
SNX13-213ENST00000611725 K7EMT4 169 aa4.87□□□□□ -1.63
SNX13-213ENST00000611725 PRORYQ9H606 182 aa4.87□□□□□ -1.63
SNX13-213ENST00000611725 VPREB3Q9UKI3 123 aa4.87□□□□□ -1.63
SNX13-213ENST00000611725 EMP1P54849 157 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 MEGF9Q9H1U4 602 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 TP53TG1Q9Y2A0 90 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 TRAV12-2A0A075B6T6 113 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 CHD6Q8TD26 2715 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 GAGE12BA1L429 117 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 APOMO95445 188 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 TCTEX1D4Q5JR98 221 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 ZFAND2AQ8N6M9 145 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 TRAV8-2A0A0B4J237 113 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 HOXD3P31249 432 aaPredicted RBP4.86□□□□□ -1.63
SNX13-213ENST00000611725 GPHB5Q86YW7 130 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 OR5A1Q8NGJ0 315 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 KLK9Q9UKQ9 250 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 TRBV25-1A0A075B6N4 114 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 CLPSL1A2RUU4 121 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 K7EP13 123 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 LGALS1P09382 135 aaKnown RBP4.86□□□□□ -1.63
SNX13-213ENST00000611725 RBX1P62877 108 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 SRSF2Q01130 221 aaKnown RBP4.86□□□□□ -1.63
SNX13-213ENST00000611725 SAMD5Q5TGI4 173 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 CNFNQ9BYD5 112 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 SCRT2Q9NQ03 307 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 MRPL16Q9NX20 251 aaKnown RBP4.86□□□□□ -1.63
SNX13-213ENST00000611725 PSMB2P49721 201 aa4.86□□□□□ -1.63
SNX13-213ENST00000611725 SIVA1O15304 175 aa4.85□□□□□ -1.63
SNX13-213ENST00000611725 SFTA2Q6UW10 78 aa4.85□□□□□ -1.63
SNX13-213ENST00000611725 COX8CQ7Z4L0 72 aa4.85□□□□□ -1.63
SNX13-213ENST00000611725 GEMIN7Q9H840 131 aaKnown RBP4.85□□□□□ -1.63
SNX13-213ENST00000611725 FLNAP21333 2647 aaKnown RBP4.85□□□□□ -1.63
SNX13-213ENST00000611725 USP24Q9UPU5 2620 aa4.85□□□□□ -1.63
SNX13-213ENST00000611725 HLA-DRB4P13762 266 aa4.85□□□□□ -1.63
SNX13-213ENST00000611725 U3KQE9 123 aa4.85□□□□□ -1.63
SNX13-213ENST00000611725 HLA-DRB4X5D2U9 266 aa4.85□□□□□ -1.63
SNX13-213ENST00000611725 KNCNA6PVL3 124 aa4.85□□□□□ -1.63
SNX13-213ENST00000611725 ODF1Q14990 250 aa4.85□□□□□ -1.63
SNX13-213ENST00000611725 A0A087WX48 190 aa4.85□□□□□ -1.63
SNX13-213ENST00000611725 PRSS29PA6NIE9 313 aa4.85□□□□□ -1.63
SNX13-213ENST00000611725 K7EMI3 77 aa4.85□□□□□ -1.63
SNX13-213ENST00000611725 PRADC1Q9BSG0 188 aa4.85□□□□□ -1.63
SNX13-213ENST00000611725 FRYQ5TBA9 3013 aa4.85□□□□□ -1.63
SNX13-213ENST00000611725 IGSF10Q6WRI0 2623 aa4.85□□□□□ -1.63
SNX13-213ENST00000611725 A0A1W2PRX2 142 aa4.85□□□□□ -1.63
SNX13-213ENST00000611725 UNC79Q9P2D8 2635 aa4.84□□□□□ -1.63
SNX13-213ENST00000611725 A0A1B0GWB2 263 aa4.84□□□□□ -1.63
SNX13-213ENST00000611725 TAX1BP3O14907 124 aa4.84□□□□□ -1.63
SNX13-213ENST00000611725 IGHG4P01861 327 aa4.84□□□□□ -1.63
SNX13-213ENST00000611725 ZNF418Q8TF45 676 aaPredicted RBP4.84□□□□□ -1.63
SNX13-213ENST00000611725 RPL39LQ96EH5 51 aaKnown RBP4.84□□□□□ -1.63
SNX13-213ENST00000611725 H3BRM9 83 aa4.84□□□□□ -1.63
SNX13-213ENST00000611725 PRB1P04280 392 aa4.84□□□□□ -1.63
SNX13-213ENST00000611725 KLHL30-AS1Q8NEE0 82 aa4.84□□□□□ -1.63
SNX13-213ENST00000611725 KMT2EQ8IZD2 1858 aa4.84□□□□□ -1.63
SNX13-213ENST00000611725 H7C2G1 150 aa4.84□□□□□ -1.63
SNX13-213ENST00000611725 U3KQK5 164 aa4.84□□□□□ -1.63
SNX13-213ENST00000611725 YAE1D1Q9NRH1 226 aa4.84□□□□□ -1.64
SNX13-213ENST00000611725 IGHV3-73A0A0B4J1V6 119 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 TMEM89A2RUT3 159 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 GAS8-AS1O95177 125 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 CD28P10747 220 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 PMVKQ15126 192 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 OCIAD2Q56VL3 154 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 PIFOQ8TCI5 191 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 UBE2E2Q96LR5 201 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 ATMQ13315 3056 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 C9orf118A6NHY6 69 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 AVPP01185 164 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 TRPT1Q86TN4 253 aaKnown RBP4.83□□□□□ -1.64
SNX13-213ENST00000611725 A0A096LNJ9 63 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 A0A0J9YX75 114 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 HOXA3O43365 443 aaPredicted RBP4.83□□□□□ -1.64
SNX13-213ENST00000611725 FOXI2Q6ZQN5 318 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 GATD1Q8NB37 220 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 RNF185Q96GF1 192 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 RHODO00212 210 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 MED14OSP0DP75 135 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 DEFB136Q30KP8 78 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms