RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 MALP21145 153 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 OR5A1Q8NGJ0 315 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 IGF2BP2-AS1Q96M15 143 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 CITED2Q99967 270 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-218ENST00000610726 C10orf99Q6UWK7 81 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 ZNRF2Q8NHG8 242 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 MRPL53Q96EL3 112 aaKnown RBP5.6□□□□□ -1.51
CSDE1-218ENST00000610726 SZT2Q5T011 3432 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 A0A087X0K7 114 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 DNAJC9-AS1A6NH13 148 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 LINC01549A6NIU2 74 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 H3BUT2 72 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 RHODO00212 210 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 KRTAP10-9P60411 292 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 GPHB5Q86YW7 130 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 PYGO2Q9BRQ0 406 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 LENEPQ9Y5L5 61 aa5.6□□□□□ -1.51
CSDE1-218ENST00000610726 IGHV1-24A0A0C4DH33 117 aa5.59□□□□□ -1.51
CSDE1-218ENST00000610726 RBAKDNA6NC62 111 aa5.59□□□□□ -1.51
CSDE1-218ENST00000610726 A8MWV9 139 aa5.59□□□□□ -1.51
CSDE1-218ENST00000610726 CIDEAO60543 219 aa5.59□□□□□ -1.51
CSDE1-218ENST00000610726 EBI3Q14213 229 aa5.59□□□□□ -1.51
CSDE1-218ENST00000610726 HIST2H2BDQ6DRA6 164 aa5.59□□□□□ -1.51
CSDE1-218ENST00000610726 CFAP161Q6P656 301 aa5.59□□□□□ -1.51
CSDE1-218ENST00000610726 TMEM61Q8N0U2 210 aa5.59□□□□□ -1.51
CSDE1-218ENST00000610726 SPAG8Q99932 426 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-218ENST00000610726 C11orf68Q9H3H3 251 aaKnown RBP5.59□□□□□ -1.51
CSDE1-218ENST00000610726 CPAMD8Q8IZJ3 1885 aa5.59□□□□□ -1.51
CSDE1-218ENST00000610726 F5H768 121 aa5.59□□□□□ -1.51
CSDE1-218ENST00000610726 Q8N8P6 123 aa5.59□□□□□ -1.51
CSDE1-218ENST00000610726 GTSF1Q8WW33 167 aa5.59□□□□□ -1.51
CSDE1-218ENST00000610726 NAA38Q9BRA0 125 aaKnown RBP5.59□□□□□ -1.51
CSDE1-218ENST00000610726 SPXQ9BT56 116 aa5.59□□□□□ -1.51
CSDE1-218ENST00000610726 BPTFQ12830 3046 aa5.59□□□□□ -1.51
CSDE1-218ENST00000610726 NDUFS6O75380 124 aaKnown RBP5.59□□□□□ -1.52
CSDE1-218ENST00000610726 KLF12Q9Y4X4 402 aa5.59□□□□□ -1.52
CSDE1-218ENST00000610726 NPC2P61916 151 aa5.58□□□□□ -1.52
CSDE1-218ENST00000610726 LINC01559Q495D7 138 aa5.58□□□□□ -1.52
CSDE1-218ENST00000610726 LRRC75A-AS1Q8N1F1 130 aa5.58□□□□□ -1.52
CSDE1-218ENST00000610726 SMIM2Q9BVW6 85 aa5.58□□□□□ -1.52
CSDE1-218ENST00000610726 POLR3KQ9Y2Y1 108 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-218ENST00000610726 K7EMT4 169 aa5.58□□□□□ -1.52
CSDE1-218ENST00000610726 K7ERU9 68 aa5.58□□□□□ -1.52
CSDE1-218ENST00000610726 CRPP02741 224 aa5.58□□□□□ -1.52
CSDE1-218ENST00000610726 DAD1P61803 113 aa5.58□□□□□ -1.52
CSDE1-218ENST00000610726 MPV17L2Q567V2 206 aa5.58□□□□□ -1.52
CSDE1-218ENST00000610726 COPS9Q8WXC6 57 aa5.58□□□□□ -1.52
CSDE1-218ENST00000610726 ZNF48Q96MX3 618 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-218ENST00000610726 AVPP01185 164 aa5.58□□□□□ -1.52
CSDE1-218ENST00000610726 IGHG4P01861 327 aa5.58□□□□□ -1.52
CSDE1-218ENST00000610726 IGF1P05019 195 aa5.58□□□□□ -1.52
CSDE1-218ENST00000610726 PLNP26678 52 aa5.58□□□□□ -1.52
CSDE1-218ENST00000610726 NOP10Q9NPE3 64 aaKnown RBP5.58□□□□□ -1.52
CSDE1-218ENST00000610726 ZNF292O60281 2723 aa5.58□□□□□ -1.52
CSDE1-218ENST00000610726 A0A096LPF7 62 aa5.57□□□□□ -1.52
CSDE1-218ENST00000610726 NUPR1O60356 82 aa5.57□□□□□ -1.52
CSDE1-218ENST00000610726 DLX4Q92988 240 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-218ENST00000610726 VPS13AQ96RL7 3174 aa5.57□□□□□ -1.52
CSDE1-218ENST00000610726 Q6YL49 198 aa5.57□□□□□ -1.52
CSDE1-218ENST00000610726 ORAOV1Q8WV07 137 aa5.57□□□□□ -1.52
CSDE1-218ENST00000610726 U3KQE9 123 aa5.57□□□□□ -1.52
CSDE1-218ENST00000610726 LINC00322Q6ZN03 302 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-218ENST00000610726 Q6ZS46 218 aa5.57□□□□□ -1.52
CSDE1-218ENST00000610726 BBC3Q96PG8 261 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-218ENST00000610726 SPCS1Q9Y6A9 102 aa5.57□□□□□ -1.52
CSDE1-218ENST00000610726 I3L3M4 83 aa5.57□□□□□ -1.52
CSDE1-218ENST00000610726 ZNF625Q96I27 306 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-218ENST00000610726 SRSF2Q01130 221 aaKnown RBP5.56□□□□□ -1.52
CSDE1-218ENST00000610726 CBY1Q9Y3M2 126 aa5.56□□□□□ -1.52
CSDE1-218ENST00000610726 TRBV7-9A0A0J9YWB2 115 aa5.56□□□□□ -1.52
CSDE1-218ENST00000610726 CLPSL1A2RUU4 121 aa5.56□□□□□ -1.52
CSDE1-218ENST00000610726 LINC00158P58513 81 aa5.56□□□□□ -1.52
CSDE1-218ENST00000610726 ADAMTS20P59510 1910 aa5.56□□□□□ -1.52
CSDE1-218ENST00000610726 M0R2P5 195 aa5.56□□□□□ -1.52
CSDE1-218ENST00000610726 DNAL4O96015 105 aa5.56□□□□□ -1.52
CSDE1-218ENST00000610726 HSD52Q0P140 79 aa5.56□□□□□ -1.52
CSDE1-218ENST00000610726 RNASE13Q5GAN3 156 aaKnown RBP5.56□□□□□ -1.52
CSDE1-218ENST00000610726 C9orf47Q6ZRZ4 202 aa5.56□□□□□ -1.52
CSDE1-218ENST00000610726 Q8N1Y9 231 aa5.56□□□□□ -1.52
CSDE1-218ENST00000610726 RPL39LQ96EH5 51 aaKnown RBP5.56□□□□□ -1.52
CSDE1-218ENST00000610726 CHAC1Q9BUX1 264 aa5.56□□□□□ -1.52
CSDE1-218ENST00000610726 MRPL35Q9NZE8 188 aaKnown RBP5.56□□□□□ -1.52
CSDE1-218ENST00000610726 INAFM1C9JVW0 142 aa5.55□□□□□ -1.52
CSDE1-218ENST00000610726 ZNF80P51504 273 aaPredicted RBP5.55□□□□□ -1.52
CSDE1-218ENST00000610726 TMEM89A2RUT3 159 aa5.55□□□□□ -1.52
CSDE1-218ENST00000610726 IGLL1P15814 213 aa5.55□□□□□ -1.52
CSDE1-218ENST00000610726 APOC4P55056 127 aa5.55□□□□□ -1.52
CSDE1-218ENST00000610726 CDPF1Q6NVV7 123 aa5.55□□□□□ -1.52
CSDE1-218ENST00000610726 ADAMTSL5Q6ZMM2 481 aa5.55□□□□□ -1.52
CSDE1-218ENST00000610726 Q8N6K4 173 aa5.55□□□□□ -1.52
CSDE1-218ENST00000610726 IGLV2-8P01709 118 aa5.55□□□□□ -1.52
CSDE1-218ENST00000610726 C6orf226Q5I0X4 101 aa5.55□□□□□ -1.52
CSDE1-218ENST00000610726 MRAPQ8TCY5 172 aa5.55□□□□□ -1.52
CSDE1-218ENST00000610726 HLA-DRB4P13762 266 aa5.55□□□□□ -1.52
CSDE1-218ENST00000610726 SEC11AP67812 179 aa5.55□□□□□ -1.52
CSDE1-218ENST00000610726 GAGE6Q13070 117 aa5.55□□□□□ -1.52
CSDE1-218ENST00000610726 TIMM21Q9BVV7 248 aa5.55□□□□□ -1.52
CSDE1-218ENST00000610726 HLA-DRB4X5D2U9 266 aa5.55□□□□□ -1.52
CSDE1-218ENST00000610726 TRBV25-1A0A075B6N4 114 aa5.54□□□□□ -1.52
CSDE1-218ENST00000610726 A0A1B0GWB2 263 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms