RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 COX7B2Q8TF08 81 aa10.3□□□□□ -0.76
USP6NL-205ENST00000609104 CEP192Q8TEP8 1941 aa10.3□□□□□ -0.76
USP6NL-205ENST00000609104 NBASA2RRP1 2371 aa10.29□□□□□ -0.76
USP6NL-205ENST00000609104 NCOR1P1Q9H4R4 102 aa10.29□□□□□ -0.76
USP6NL-205ENST00000609104 IGFBPL1Q8WX77 278 aa10.29□□□□□ -0.76
USP6NL-205ENST00000609104 K7ENP7 123 aa10.29□□□□□ -0.76
USP6NL-205ENST00000609104 HERV-K104P63124 156 aa10.29□□□□□ -0.76
USP6NL-205ENST00000609104 CACNA1HO95180 2353 aa10.29□□□□□ -0.76
USP6NL-205ENST00000609104 PROK2Q9HC23 129 aa10.29□□□□□ -0.76
USP6NL-205ENST00000609104 TRAV4A0A0B4J268 109 aa10.28□□□□□ -0.76
USP6NL-205ENST00000609104 WFDC9Q8NEX5 89 aa10.28□□□□□ -0.76
USP6NL-205ENST00000609104 FOXI2Q6ZQN5 318 aa10.28□□□□□ -0.76
USP6NL-205ENST00000609104 APRG1Q8IVJ8 170 aa10.28□□□□□ -0.76
USP6NL-205ENST00000609104 ARHGAP32A7KAX9 2087 aa10.28□□□□□ -0.76
USP6NL-205ENST00000609104 CCL24O00175 119 aa10.28□□□□□ -0.76
USP6NL-205ENST00000609104 DEFB136Q30KP8 78 aa10.28□□□□□ -0.76
USP6NL-205ENST00000609104 HOXB4P17483 251 aaPredicted RBP10.28□□□□□ -0.76
USP6NL-205ENST00000609104 C1orf147Q96MC9 270 aaPredicted RBP10.28□□□□□ -0.76
USP6NL-205ENST00000609104 FUSP35637 526 aaKnown RBP eCLIP10.27□□□□□ -0.76
USP6NL-205ENST00000609104 ALPK3Q96L96 1907 aa10.27□□□□□ -0.77
USP6NL-205ENST00000609104 TANC1Q9C0D5 1861 aa10.27□□□□□ -0.77
USP6NL-205ENST00000609104 C11orf52Q96A22 123 aa10.27□□□□□ -0.77
USP6NL-205ENST00000609104 IGLV10-54A0A075B6I4 117 aa10.27□□□□□ -0.77
USP6NL-205ENST00000609104 TEX48A0A1B0GUV7 120 aa10.27□□□□□ -0.77
USP6NL-205ENST00000609104 ETDCA0A1B0GVM5 59 aa10.27□□□□□ -0.77
USP6NL-205ENST00000609104 ZNF524Q96C55 264 aa10.27□□□□□ -0.77
USP6NL-205ENST00000609104 MUSTN1Q8IVN3 82 aa10.26□□□□□ -0.77
USP6NL-205ENST00000609104 ICOSQ9Y6W8 199 aa10.26□□□□□ -0.77
USP6NL-205ENST00000609104 A0A0B4J2C4 111 aa10.26□□□□□ -0.77
USP6NL-205ENST00000609104 J3QLI3 93 aa10.26□□□□□ -0.77
USP6NL-205ENST00000609104 A0A1B0GX51 115 aa10.26□□□□□ -0.77
USP6NL-205ENST00000609104 PRSS47A8MTI9 375 aa10.26□□□□□ -0.77
USP6NL-205ENST00000609104 ACYP1P07311 99 aa10.25□□□□□ -0.77
USP6NL-205ENST00000609104 RSPO1Q2MKA7 263 aaPredicted RBP10.25□□□□□ -0.77
USP6NL-205ENST00000609104 TIMM17AQ99595 171 aa10.25□□□□□ -0.77
USP6NL-205ENST00000609104 ZFP2Q6ZN57 461 aa10.25□□□□□ -0.77
USP6NL-205ENST00000609104 ZNF503Q96F45 646 aa10.25□□□□□ -0.77
USP6NL-205ENST00000609104 AGPAT4-IT1Q9H0P7 198 aa10.25□□□□□ -0.77
USP6NL-205ENST00000609104 C14orf132Q9NPU4 83 aa10.25□□□□□ -0.77
USP6NL-205ENST00000609104 SND1-IT1Q9HBX3 110 aa10.25□□□□□ -0.77
USP6NL-205ENST00000609104 HIST2H2BCQ6DN03 193 aa10.25□□□□□ -0.77
USP6NL-205ENST00000609104 SPANXCQ9NY87 97 aa10.24□□□□□ -0.77
USP6NL-205ENST00000609104 RBAKDNA6NC62 111 aa10.24□□□□□ -0.77
USP6NL-205ENST00000609104 IGLV1-44P01699 117 aa10.24□□□□□ -0.77
USP6NL-205ENST00000609104 THSD7BQ9C0I4 1608 aa10.24□□□□□ -0.77
USP6NL-205ENST00000609104 TDRG1Q3Y452 100 aa10.24□□□□□ -0.77
USP6NL-205ENST00000609104 DEFB125Q8N687 156 aa10.24□□□□□ -0.77
USP6NL-205ENST00000609104 PRR20EP86478 221 aa10.24□□□□□ -0.77
USP6NL-205ENST00000609104 PRR20CP86479 221 aa10.24□□□□□ -0.77
USP6NL-205ENST00000609104 PRR20DP86480 221 aa10.24□□□□□ -0.77
USP6NL-205ENST00000609104 PRR20BP86481 221 aa10.24□□□□□ -0.77
USP6NL-205ENST00000609104 PRR20AP86496 221 aa10.24□□□□□ -0.77
USP6NL-205ENST00000609104 GYPEP15421 78 aa10.23□□□□□ -0.77
USP6NL-205ENST00000609104 LINC00173Q6ZV60 143 aa10.23□□□□□ -0.77
USP6NL-205ENST00000609104 FAM236AA0A1B0GUQ0 79 aa10.23□□□□□ -0.77
USP6NL-205ENST00000609104 FAM236BA0A1B0GV22 79 aa10.23□□□□□ -0.77
USP6NL-205ENST00000609104 PSMB8P28062 276 aa10.23□□□□□ -0.77
USP6NL-205ENST00000609104 DAND5Q8N907 189 aa10.23□□□□□ -0.77
USP6NL-205ENST00000609104 IGHV4-59P01825 116 aa10.23□□□□□ -0.77
USP6NL-205ENST00000609104 SLURP1P55000 103 aa10.23□□□□□ -0.77
USP6NL-205ENST00000609104 WNK1Q9H4A3 2382 aa10.23□□□□□ -0.77
USP6NL-205ENST00000609104 NDUFC2O95298 119 aa10.23□□□□□ -0.77
USP6NL-205ENST00000609104 PRR14LQ5THK1 2151 aa10.23□□□□□ -0.77
USP6NL-205ENST00000609104 IGLL5B9A064 214 aa10.23□□□□□ -0.77
USP6NL-205ENST00000609104 VSIG2Q96IQ7 327 aa10.23□□□□□ -0.77
USP6NL-205ENST00000609104 A4D1N5 150 aa10.22□□□□□ -0.77
USP6NL-205ENST00000609104 DAZ2Q13117 558 aaKnown RBP10.22□□□□□ -0.77
USP6NL-205ENST00000609104 DAZ4Q86SG3 579 aaKnown RBP10.22□□□□□ -0.77
USP6NL-205ENST00000609104 DAZ3Q9NR90 486 aaKnown RBP10.22□□□□□ -0.77
USP6NL-205ENST00000609104 WFDC2Q14508 124 aa10.22□□□□□ -0.77
USP6NL-205ENST00000609104 DEFB112Q30KQ8 113 aa10.22□□□□□ -0.77
USP6NL-205ENST00000609104 CAMK2N2Q96S95 79 aa10.22□□□□□ -0.77
USP6NL-205ENST00000609104 COX7A2LO14548 114 aa10.22□□□□□ -0.77
USP6NL-205ENST00000609104 BAALCQ8WXS3 180 aa10.22□□□□□ -0.77
USP6NL-205ENST00000609104 ELANEP08246 267 aa10.22□□□□□ -0.77
USP6NL-205ENST00000609104 RITA1Q96K30 269 aa10.22□□□□□ -0.77
USP6NL-205ENST00000609104 IGHV3-30P01768 117 aa10.22□□□□□ -0.77
USP6NL-205ENST00000609104 IGHV3-33P01772 117 aa10.22□□□□□ -0.77
USP6NL-205ENST00000609104 IGHV3-30-3P0DP02 117 aa10.22□□□□□ -0.77
USP6NL-205ENST00000609104 IGHV3-30-5P0DP03 117 aa10.22□□□□□ -0.77
USP6NL-205ENST00000609104 C8orf31Q8N9H6 132 aa10.22□□□□□ -0.77
USP6NL-205ENST00000609104 NCR3O14931 201 aa10.21□□□□□ -0.77
USP6NL-205ENST00000609104 SEM1Q6ZVN7 128 aa10.21□□□□□ -0.77
USP6NL-205ENST00000609104 SMIM20Q8N5G0 67 aa10.21□□□□□ -0.77
USP6NL-205ENST00000609104 TMEM61Q8N0U2 210 aa10.21□□□□□ -0.78
USP6NL-205ENST00000609104 LINC01545Q5VT33 79 aa10.21□□□□□ -0.78
USP6NL-205ENST00000609104 K7EQD1 137 aa10.21□□□□□ -0.78
USP6NL-205ENST00000609104 ATOX1O00244 68 aa10.21□□□□□ -0.78
USP6NL-205ENST00000609104 NREPQ16612 68 aa10.21□□□□□ -0.78
USP6NL-205ENST00000609104 H3BUA1 57 aa10.2□□□□□ -0.78
USP6NL-205ENST00000609104 SPATA25Q9BR10 227 aa10.2□□□□□ -0.78
USP6NL-205ENST00000609104 NUPR1O60356 82 aa10.2□□□□□ -0.78
USP6NL-205ENST00000609104 ESM1Q9NQ30 184 aa10.2□□□□□ -0.78
USP6NL-205ENST00000609104 TIRAPP58753 221 aa10.2□□□□□ -0.78
USP6NL-205ENST00000609104 KIR2DL5BA0A0G2JN68 375 aa10.2□□□□□ -0.78
USP6NL-205ENST00000609104 KIR2DL5BA0A0G2JPC4 375 aa10.2□□□□□ -0.78
USP6NL-205ENST00000609104 KIR2DL5AQ8N109 375 aa10.2□□□□□ -0.78
USP6NL-205ENST00000609104 DSCAMO60469 2012 aa10.2□□□□□ -0.78
USP6NL-205ENST00000609104 RIF1Q5UIP0 2472 aaKnown RBP10.2□□□□□ -0.78
USP6NL-205ENST00000609104 ANKRD39Q53RE8 183 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms