RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 Q6ZQT7 251 aa8.28□□□□□ -1.08
LINC00539-204ENST00000608957 TRAV12-3A0A0B4J271 114 aa8.27□□□□□ -1.09
LINC00539-204ENST00000608957 LY6G6CO95867 125 aa8.27□□□□□ -1.09
LINC00539-204ENST00000608957 AMBPP02760 352 aa8.27□□□□□ -1.09
LINC00539-204ENST00000608957 TYMSP04818 313 aa8.27□□□□□ -1.09
LINC00539-204ENST00000608957 ZNF705AQ6ZN79 300 aaPredicted RBP8.27□□□□□ -1.09
LINC00539-204ENST00000608957 KLK5Q9Y337 293 aaPredicted RBP8.27□□□□□ -1.09
LINC00539-204ENST00000608957 DNAH6Q9C0G6 4158 aa8.26□□□□□ -1.09
LINC00539-204ENST00000608957 CRXO43186 299 aaPredicted RBP8.26□□□□□ -1.09
LINC00539-204ENST00000608957 SPINK4O60575 86 aa8.26□□□□□ -1.09
LINC00539-204ENST00000608957 ZNF324O75467 553 aaPredicted RBP8.26□□□□□ -1.09
LINC00539-204ENST00000608957 IGLC6P0CF74 106 aa8.26□□□□□ -1.09
LINC00539-204ENST00000608957 CTRLP40313 264 aa8.26□□□□□ -1.09
LINC00539-204ENST00000608957 FOXA3P55318 350 aaPredicted RBP8.26□□□□□ -1.09
LINC00539-204ENST00000608957 ANXA2RQ3ZCQ2 193 aa8.26□□□□□ -1.09
LINC00539-204ENST00000608957 MUC21Q5SSG8 566 aa8.26□□□□□ -1.09
LINC00539-204ENST00000608957 MRPL54Q6P161 138 aaKnown RBP8.26□□□□□ -1.09
LINC00539-204ENST00000608957 Q6ZTC4 211 aa8.26□□□□□ -1.09
LINC00539-204ENST00000608957 ATP5L2Q7Z4Y8 100 aa8.26□□□□□ -1.09
LINC00539-204ENST00000608957 FER1L6-AS1Q8NA97 138 aa8.26□□□□□ -1.09
LINC00539-204ENST00000608957 PGLYRP4Q96LB8 373 aa8.26□□□□□ -1.09
LINC00539-204ENST00000608957 EPPK1P58107 5090 aaKnown RBP8.25□□□□□ -1.09
LINC00539-204ENST00000608957 GRIFINA4D1Z8 144 aa8.25□□□□□ -1.09
LINC00539-204ENST00000608957 INSP01308 110 aa8.25□□□□□ -1.09
LINC00539-204ENST00000608957 RPS10P46783 165 aaKnown RBP8.25□□□□□ -1.09
LINC00539-204ENST00000608957 NUTF2P61970 127 aaKnown RBP8.25□□□□□ -1.09
LINC00539-204ENST00000608957 FAM159AQ6UWV7 190 aa8.25□□□□□ -1.09
LINC00539-204ENST00000608957 ZNF575Q86XF7 245 aa8.25□□□□□ -1.09
LINC00539-204ENST00000608957 C1orf158Q8N1D5 194 aa8.25□□□□□ -1.09
LINC00539-204ENST00000608957 BORCS7Q96B45 105 aa8.25□□□□□ -1.09
LINC00539-204ENST00000608957 KCNS1Q96KK3 526 aa8.25□□□□□ -1.09
LINC00539-204ENST00000608957 C20orf144Q9BQM9 153 aa8.25□□□□□ -1.09
LINC00539-204ENST00000608957 TPPP3Q9BW30 176 aa8.25□□□□□ -1.09
LINC00539-204ENST00000608957 C1QTNF4Q9BXJ3 329 aa8.25□□□□□ -1.09
LINC00539-204ENST00000608957 VPS13DQ5THJ4 4388 aa8.24□□□□□ -1.09
LINC00539-204ENST00000608957 A0A1B0GXF2 115 aa8.24□□□□□ -1.09
LINC00539-204ENST00000608957 ASIPP42127 132 aa8.24□□□□□ -1.09
LINC00539-204ENST00000608957 C12orf74Q32Q52 190 aa8.24□□□□□ -1.09
LINC00539-204ENST00000608957 TDRG1Q3Y452 100 aa8.24□□□□□ -1.09
LINC00539-204ENST00000608957 COX19Q49B96 90 aa8.24□□□□□ -1.09
LINC00539-204ENST00000608957 RASL11AQ6T310 242 aa8.24□□□□□ -1.09
LINC00539-204ENST00000608957 LYZL1Q6UWQ5 148 aa8.24□□□□□ -1.09
LINC00539-204ENST00000608957 APLNQ9ULZ1 77 aa8.24□□□□□ -1.09
LINC00539-204ENST00000608957 IGHV3OR16-12A0A075B7B8 117 aa8.23□□□□□ -1.09
LINC00539-204ENST00000608957 IGHV1OR15-1A0A075B7D0 117 aa8.23□□□□□ -1.09
LINC00539-204ENST00000608957 A0A1B0GUT8 65 aa8.23□□□□□ -1.09
LINC00539-204ENST00000608957 H3BVH4 76 aa8.23□□□□□ -1.09
LINC00539-204ENST00000608957 ARMS2P0C7Q2 107 aa8.23□□□□□ -1.09
LINC00539-204ENST00000608957 MED14OSP0DP75 135 aa8.23□□□□□ -1.09
LINC00539-204ENST00000608957 HBBP68871 147 aa8.23□□□□□ -1.09
LINC00539-204ENST00000608957 RIGQ13278 110 aa8.23□□□□□ -1.09
LINC00539-204ENST00000608957 DNLZQ5SXM8 178 aa8.23□□□□□ -1.09
LINC00539-204ENST00000608957 WDR73Q6P4I2 378 aa8.23□□□□□ -1.09
LINC00539-204ENST00000608957 FRAS1Q86XX4 4008 aa8.22□□□□□ -1.09
LINC00539-204ENST00000608957 SNURFLB1AK76 121 aa8.22□□□□□ -1.09
LINC00539-204ENST00000608957 F2Z2F3 143 aa8.22□□□□□ -1.09
LINC00539-204ENST00000608957 SNAI2O43623 268 aa8.22□□□□□ -1.09
LINC00539-204ENST00000608957 PRM2P04554 102 aa8.22□□□□□ -1.09
LINC00539-204ENST00000608957 OR5AL1P0C617 328 aa8.22□□□□□ -1.09
LINC00539-204ENST00000608957 S100A4P26447 101 aaKnown RBP8.22□□□□□ -1.09
LINC00539-204ENST00000608957 LGALS9CQ6DKI2 356 aa8.22□□□□□ -1.09
LINC00539-204ENST00000608957 GNB1LQ9BYB4 327 aa8.22□□□□□ -1.09
LINC00539-204ENST00000608957 CNFNQ9BYD5 112 aa8.22□□□□□ -1.09
LINC00539-204ENST00000608957 TMA7Q9Y2S6 64 aaKnown RBP8.22□□□□□ -1.09
LINC00539-204ENST00000608957 TRGV11A0A075B6L2 103 aa8.21□□□□□ -1.1
LINC00539-204ENST00000608957 TRAV10A0A0B4J240 114 aa8.21□□□□□ -1.1
LINC00539-204ENST00000608957 A0A1B0GW15 77 aa8.21□□□□□ -1.1
LINC00539-204ENST00000608957 C1orf196B1AJZ1 125 aa8.21□□□□□ -1.1
LINC00539-204ENST00000608957 IGLL5B9A064 214 aa8.21□□□□□ -1.1
LINC00539-204ENST00000608957 GNRH2O43555 120 aa8.21□□□□□ -1.1
LINC00539-204ENST00000608957 HLA-DQA1P01909 254 aa8.21□□□□□ -1.1
LINC00539-204ENST00000608957 MT-ND6P03923 174 aa8.21□□□□□ -1.1
LINC00539-204ENST00000608957 TRGC2P03986 189 aa8.21□□□□□ -1.1
LINC00539-204ENST00000608957 S100A8P05109 93 aa8.21□□□□□ -1.1
LINC00539-204ENST00000608957 RNASE3P12724 160 aaKnown RBP8.21□□□□□ -1.1
LINC00539-204ENST00000608957 CAMPP49913 170 aa8.21□□□□□ -1.1
LINC00539-204ENST00000608957 RAB4BP61018 213 aa8.21□□□□□ -1.1
LINC00539-204ENST00000608957 TMEM136Q6ZRR5 245 aa8.21□□□□□ -1.1
LINC00539-204ENST00000608957 TMEM256Q8N2U0 113 aa8.21□□□□□ -1.1
LINC00539-204ENST00000608957 LINC00467Q9BRT7 94 aa8.21□□□□□ -1.1
LINC00539-204ENST00000608957 SSBP4Q9BWG4 385 aaPredicted RBP8.21□□□□□ -1.1
LINC00539-204ENST00000608957 TIMM8BQ9Y5J9 83 aaPredicted RBP8.21□□□□□ -1.1
LINC00539-204ENST00000608957 TRAPPC1Q9Y5R8 145 aa8.21□□□□□ -1.1
LINC00539-204ENST00000608957 IGHV3-16A0A0C4DH30 117 aa8.2□□□□□ -1.1
LINC00539-204ENST00000608957 MUC21A0A0G2JKD1 596 aa8.2□□□□□ -1.1
LINC00539-204ENST00000608957 MUC21A0A140T8X8 626 aa8.2□□□□□ -1.1
LINC00539-204ENST00000608957 SMIM9A6NGZ8 99 aa8.2□□□□□ -1.1
LINC00539-204ENST00000608957 CBY3A6NI87 242 aa8.2□□□□□ -1.1
LINC00539-204ENST00000608957 CACNG7P62955 275 aa8.2□□□□□ -1.1
LINC00539-204ENST00000608957 GATD1Q8NB37 220 aa8.2□□□□□ -1.1
LINC00539-204ENST00000608957 FRZBQ92765 325 aa8.2□□□□□ -1.1
LINC00539-204ENST00000608957 LINC01587Q99440 93 aa8.2□□□□□ -1.1
LINC00539-204ENST00000608957 SCRT2Q9NQ03 307 aa8.2□□□□□ -1.1
LINC00539-204ENST00000608957 TP53TG3Q9ULZ0 132 aa8.2□□□□□ -1.1
LINC00539-204ENST00000608957 GOLT1BQ9Y3E0 138 aa8.2□□□□□ -1.1
LINC00539-204ENST00000608957 NACAE9PAV3 2078 aa8.19□□□□□ -1.1
LINC00539-204ENST00000608957 IGHV4-4A0A075B6R2 117 aa8.19□□□□□ -1.1
LINC00539-204ENST00000608957 EMP1P54849 157 aa8.19□□□□□ -1.1
LINC00539-204ENST00000608957 RAB5BP61020 215 aa8.19□□□□□ -1.1
LINC00539-204ENST00000608957 FABP9Q0Z7S8 132 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms