RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 CDPF1Q6NVV7 123 aa13.24□□□□□ -0.29
SGMS1-208ENST00000608287 AKAP14Q86UN6 197 aa13.24□□□□□ -0.29
SGMS1-208ENST00000608287 TRAV4A0A0B4J268 109 aa13.23□□□□□ -0.29
SGMS1-208ENST00000608287 FABP5P3A8MUU1 101 aa13.23□□□□□ -0.29
SGMS1-208ENST00000608287 EREGO14944 169 aa13.23□□□□□ -0.29
SGMS1-208ENST00000608287 AKR1C3P42330 323 aa13.23□□□□□ -0.29
SGMS1-208ENST00000608287 ESRGQ1W209 222 aa13.23□□□□□ -0.29
SGMS1-208ENST00000608287 OR4C5Q8NGB2 326 aa13.23□□□□□ -0.29
SGMS1-208ENST00000608287 Q9H8V8 135 aa13.23□□□□□ -0.29
SGMS1-208ENST00000608287 PGPEP1Q9NXJ5 209 aa13.23□□□□□ -0.29
SGMS1-208ENST00000608287 ZFP30Q9Y2G7 519 aa13.23□□□□□ -0.29
SGMS1-208ENST00000608287 ICOSQ9Y6W8 199 aa13.23□□□□□ -0.29
SGMS1-208ENST00000608287 C9JCJ5 164 aa13.22□□□□□ -0.29
SGMS1-208ENST00000608287 J3QL48 77 aa13.22□□□□□ -0.29
SGMS1-208ENST00000608287 ZC2HC1AQ96GY0 325 aa13.22□□□□□ -0.29
SGMS1-208ENST00000608287 RAB5CP51148 216 aa13.21□□□□□ -0.29
SGMS1-208ENST00000608287 ZNF876PQ49A33 203 aa13.21□□□□□ -0.29
SGMS1-208ENST00000608287 IGKV3D-20A0A0C4DH25 116 aa13.2□□□□□ -0.3
SGMS1-208ENST00000608287 ORM1P02763 201 aa13.2□□□□□ -0.3
SGMS1-208ENST00000608287 S100A4P26447 101 aaKnown RBP13.2□□□□□ -0.3
SGMS1-208ENST00000608287 SLC51BQ86UW2 128 aa13.2□□□□□ -0.3
SGMS1-208ENST00000608287 C9orf85Q96MD7 179 aa13.2□□□□□ -0.3
SGMS1-208ENST00000608287 TRBV6-1A0A0K0K1D8 114 aa13.19□□□□□ -0.3
SGMS1-208ENST00000608287 SCO2A0A1W2PP80 73 aa13.19□□□□□ -0.3
SGMS1-208ENST00000608287 LTAP01374 205 aa13.19□□□□□ -0.3
SGMS1-208ENST00000608287 RNASE3P12724 160 aaKnown RBP13.19□□□□□ -0.3
SGMS1-208ENST00000608287 CRIP1P50238 77 aa13.19□□□□□ -0.3
SGMS1-208ENST00000608287 MRPL23Q16540 153 aaKnown RBP13.19□□□□□ -0.3
SGMS1-208ENST00000608287 MRPS16Q9Y3D3 137 aaKnown RBP13.19□□□□□ -0.3
SGMS1-208ENST00000608287 FLG2Q5D862 2391 aaPredicted RBP13.18□□□□□ -0.3
SGMS1-208ENST00000608287 B4DEV8 164 aa13.18□□□□□ -0.3
SGMS1-208ENST00000608287 TEX46H3BTG2 121 aa13.18□□□□□ -0.3
SGMS1-208ENST00000608287 M0R036 132 aa13.18□□□□□ -0.3
SGMS1-208ENST00000608287 SH2D1AO60880 128 aa13.18□□□□□ -0.3
SGMS1-208ENST00000608287 ASIPP42127 132 aa13.18□□□□□ -0.3
SGMS1-208ENST00000608287 SULT1A2P50226 295 aa13.18□□□□□ -0.3
SGMS1-208ENST00000608287 CCL20P78556 96 aa13.18□□□□□ -0.3
SGMS1-208ENST00000608287 FAM162BQ5T6X4 162 aa13.18□□□□□ -0.3
SGMS1-208ENST00000608287 COX8CQ7Z4L0 72 aa13.18□□□□□ -0.3
SGMS1-208ENST00000608287 PCNPQ8WW12 178 aaKnown RBP13.18□□□□□ -0.3
SGMS1-208ENST00000608287 UPK3BQ9BT76 320 aa13.18□□□□□ -0.3
SGMS1-208ENST00000608287 GNG13Q9P2W3 67 aa13.18□□□□□ -0.3
SGMS1-208ENST00000608287 PGPEP1LA6NFU8 196 aa13.17□□□□□ -0.3
SGMS1-208ENST00000608287 S100A9P06702 114 aaKnown RBP13.17□□□□□ -0.3
SGMS1-208ENST00000608287 ZNF506Q5JVG8 444 aa13.17□□□□□ -0.3
SGMS1-208ENST00000608287 NHLRC2Q8NBF2 726 aa13.17□□□□□ -0.3
SGMS1-208ENST00000608287 MANBALQ9NQG1 85 aa13.17□□□□□ -0.3
SGMS1-208ENST00000608287 TRAV1-1A0A0B4J248 108 aa13.16□□□□□ -0.3
SGMS1-208ENST00000608287 FAM229AH3BQW9 127 aa13.16□□□□□ -0.3
SGMS1-208ENST00000608287 K7EQD1 137 aa13.16□□□□□ -0.3
SGMS1-208ENST00000608287 GYPEP15421 78 aa13.16□□□□□ -0.3
SGMS1-208ENST00000608287 KRBOX1C9JBD0 128 aa13.15□□□□□ -0.3
SGMS1-208ENST00000608287 RS1O15537 224 aa13.15□□□□□ -0.3
SGMS1-208ENST00000608287 SRIP30626 198 aa13.15□□□□□ -0.3
SGMS1-208ENST00000608287 ZNF674Q2M3X9 581 aa13.15□□□□□ -0.3
SGMS1-208ENST00000608287 CFAP126Q5VTH2 177 aa13.15□□□□□ -0.3
SGMS1-208ENST00000608287 NEGR1Q7Z3B1 354 aa13.15□□□□□ -0.3
SGMS1-208ENST00000608287 C9orf62Q8N4C0 152 aa13.15□□□□□ -0.3
SGMS1-208ENST00000608287 PTH2Q96A98 100 aa13.15□□□□□ -0.3
SGMS1-208ENST00000608287 GRIFINA4D1Z8 144 aa13.14□□□□□ -0.31
SGMS1-208ENST00000608287 H3BVH4 76 aa13.14□□□□□ -0.31
SGMS1-208ENST00000608287 XGP55808 180 aa13.14□□□□□ -0.31
SGMS1-208ENST00000608287 MYCBP2O75592 4640 aa13.13□□□□□ -0.31
SGMS1-208ENST00000608287 TMSB15BA0A087X1C1 80 aa13.13□□□□□ -0.31
SGMS1-208ENST00000608287 IGHV3-73A0A0B4J1V6 119 aa13.13□□□□□ -0.31
SGMS1-208ENST00000608287 CIDEAO60543 219 aa13.13□□□□□ -0.31
SGMS1-208ENST00000608287 GATA1P15976 413 aaPredicted RBP13.13□□□□□ -0.31
SGMS1-208ENST00000608287 ERVFC1-1P60608 527 aa13.13□□□□□ -0.31
SGMS1-208ENST00000608287 LYPD5Q6UWN5 251 aa13.13□□□□□ -0.31
SGMS1-208ENST00000608287 Q6ZSN1 163 aa13.13□□□□□ -0.31
SGMS1-208ENST00000608287 BAGE2Q86Y30 109 aa13.13□□□□□ -0.31
SGMS1-208ENST00000608287 IL36BQ9NZH7 164 aa13.13□□□□□ -0.31
SGMS1-208ENST00000608287 SRRM2Q9UQ35 2752 aaKnown RBP13.13□□□□□ -0.31
SGMS1-208ENST00000608287 LOC100131303A0A0U1RQF7 123 aa13.12□□□□□ -0.31
SGMS1-208ENST00000608287 LINC01559Q495D7 138 aa13.12□□□□□ -0.31
SGMS1-208ENST00000608287 TXNDC17Q9BRA2 123 aa13.12□□□□□ -0.31
SGMS1-208ENST00000608287 A0A1B0GVG6 124 aa13.11□□□□□ -0.31
SGMS1-208ENST00000608287 SIVA1O15304 175 aa13.11□□□□□ -0.31
SGMS1-208ENST00000608287 NXPH4O95158 308 aa13.11□□□□□ -0.31
SGMS1-208ENST00000608287 IFNA1P01562 189 aa13.11□□□□□ -0.31
SGMS1-208ENST00000608287 ARMS2P0C7Q2 107 aa13.11□□□□□ -0.31
SGMS1-208ENST00000608287 RPL35P42766 123 aaKnown RBP13.11□□□□□ -0.31
SGMS1-208ENST00000608287 DNLZQ5SXM8 178 aa13.11□□□□□ -0.31
SGMS1-208ENST00000608287 SLC25A29Q8N8R3 303 aa13.11□□□□□ -0.31
SGMS1-208ENST00000608287 KRTAP1-5Q9BYS1 174 aa13.11□□□□□ -0.31
SGMS1-208ENST00000608287 A8MWV9 139 aa13.1□□□□□ -0.31
SGMS1-208ENST00000608287 PIK3CD-AS1Q5SR53 167 aa13.1□□□□□ -0.31
SGMS1-208ENST00000608287 SERTAD4-AS1Q5TG53 156 aa13.1□□□□□ -0.31
SGMS1-208ENST00000608287 SYT8Q8NBV8 401 aa13.1□□□□□ -0.31
SGMS1-208ENST00000608287 C11orf52Q96A22 123 aa13.1□□□□□ -0.31
SGMS1-208ENST00000608287 MLST8Q9BVC4 326 aa13.1□□□□□ -0.31
SGMS1-208ENST00000608287 TRBV6-4A0A1B0GX49 114 aa13.09□□□□□ -0.31
SGMS1-208ENST00000608287 PRR27Q6MZM9 219 aa13.09□□□□□ -0.31
SGMS1-208ENST00000608287 PRADC1Q9BSG0 188 aa13.09□□□□□ -0.31
SGMS1-208ENST00000608287 DERL1Q9BUN8 251 aa13.09□□□□□ -0.31
SGMS1-208ENST00000608287 PARLQ9H300 379 aa13.09□□□□□ -0.31
SGMS1-208ENST00000608287 PHLDA3Q9Y5J5 127 aa13.09□□□□□ -0.31
SGMS1-208ENST00000608287 MGST1P10620 155 aaKnown RBP13.08□□□□□ -0.32
SGMS1-208ENST00000608287 MEF2BQ02080 365 aaPredicted RBP13.08□□□□□ -0.32
SGMS1-208ENST00000608287 RHOHQ15669 191 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms