RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 KRTAP1-5Q9BYS1 174 aa9.35□□□□□ -0.91
CTSA-218ENST00000607814 M0R036 132 aa9.34□□□□□ -0.91
CTSA-218ENST00000607814 H2AFB1P0C5Y9 115 aa9.34□□□□□ -0.91
CTSA-218ENST00000607814 RNASE3P12724 160 aaKnown RBP9.34□□□□□ -0.91
CTSA-218ENST00000607814 TPT1P13693 172 aaKnown RBP9.34□□□□□ -0.91
CTSA-218ENST00000607814 PPT1P50897 306 aa9.34□□□□□ -0.91
CTSA-218ENST00000607814 NKX2-5P52952 324 aaPredicted RBP9.34□□□□□ -0.91
CTSA-218ENST00000607814 ZNF876PQ49A33 203 aa9.34□□□□□ -0.91
CTSA-218ENST00000607814 TTC32Q5I0X7 151 aa9.34□□□□□ -0.91
CTSA-218ENST00000607814 HIST1H2BAQ96A08 127 aa9.34□□□□□ -0.91
CTSA-218ENST00000607814 ICOSQ9Y6W8 199 aa9.34□□□□□ -0.91
CTSA-218ENST00000607814 TMSB15BA0A087X1C1 80 aa9.33□□□□□ -0.92
CTSA-218ENST00000607814 TRAV4A0A0B4J268 109 aa9.33□□□□□ -0.92
CTSA-218ENST00000607814 SCO2A0A1W2PP80 73 aa9.33□□□□□ -0.92
CTSA-218ENST00000607814 GRIFINA4D1Z8 144 aa9.33□□□□□ -0.92
CTSA-218ENST00000607814 FABP5P3A8MUU1 101 aa9.33□□□□□ -0.92
CTSA-218ENST00000607814 UMAD1C9J7I0 102 aa9.33□□□□□ -0.92
CTSA-218ENST00000607814 ORM1P02763 201 aa9.33□□□□□ -0.92
CTSA-218ENST00000607814 GYPEP15421 78 aa9.33□□□□□ -0.92
CTSA-218ENST00000607814 KRTAP10-2P60368 255 aa9.33□□□□□ -0.92
CTSA-218ENST00000607814 UBE2G1P62253 170 aa9.33□□□□□ -0.92
CTSA-218ENST00000607814 EIF5AP63241 154 aaKnown RBP9.33□□□□□ -0.92
CTSA-218ENST00000607814 NKX6-2Q9C056 277 aaPredicted RBP9.33□□□□□ -0.92
CTSA-218ENST00000607814 FAT1Q14517 4588 aa9.32□□□□□ -0.92
CTSA-218ENST00000607814 K7EQD1 137 aa9.32□□□□□ -0.92
CTSA-218ENST00000607814 SH2D1AO60880 128 aa9.32□□□□□ -0.92
CTSA-218ENST00000607814 AKR1C3P42330 323 aa9.32□□□□□ -0.92
CTSA-218ENST00000607814 LYPD5Q6UWN5 251 aa9.32□□□□□ -0.92
CTSA-218ENST00000607814 C9orf85Q96MD7 179 aa9.32□□□□□ -0.92
CTSA-218ENST00000607814 JPT2Q9H910 190 aa9.32□□□□□ -0.92
CTSA-218ENST00000607814 MRPS16Q9Y3D3 137 aaKnown RBP9.32□□□□□ -0.92
CTSA-218ENST00000607814 FLG2Q5D862 2391 aaPredicted RBP9.32□□□□□ -0.92
CTSA-218ENST00000607814 A0A1W2PPQ1 181 aa9.31□□□□□ -0.92
CTSA-218ENST00000607814 FBLL1A6NHQ2 334 aaKnown RBP9.31□□□□□ -0.92
CTSA-218ENST00000607814 B4DEV8 164 aa9.31□□□□□ -0.92
CTSA-218ENST00000607814 S100A4P26447 101 aaKnown RBP9.31□□□□□ -0.92
CTSA-218ENST00000607814 ZNF506Q5JVG8 444 aa9.31□□□□□ -0.92
CTSA-218ENST00000607814 CFAP126Q5VTH2 177 aa9.31□□□□□ -0.92
CTSA-218ENST00000607814 FMC1Q96HJ9 113 aa9.31□□□□□ -0.92
CTSA-218ENST00000607814 GNG13Q9P2W3 67 aa9.31□□□□□ -0.92
CTSA-218ENST00000607814 H3BVH4 76 aa9.3□□□□□ -0.92
CTSA-218ENST00000607814 RS1O15537 224 aa9.3□□□□□ -0.92
CTSA-218ENST00000607814 NXPH4O95158 308 aa9.3□□□□□ -0.92
CTSA-218ENST00000607814 SLAQ13239 276 aa9.3□□□□□ -0.92
CTSA-218ENST00000607814 MRPL23Q16540 153 aaKnown RBP9.3□□□□□ -0.92
CTSA-218ENST00000607814 NEGR1Q7Z3B1 354 aa9.3□□□□□ -0.92
CTSA-218ENST00000607814 SLC51BQ86UW2 128 aa9.3□□□□□ -0.92
CTSA-218ENST00000607814 UPK3BQ9BT76 320 aa9.3□□□□□ -0.92
CTSA-218ENST00000607814 TNFRSF18Q9Y5U5 241 aa9.3□□□□□ -0.92
CTSA-218ENST00000607814 KRBOX1C9JBD0 128 aa9.29□□□□□ -0.92
CTSA-218ENST00000607814 LTAP01374 205 aa9.29□□□□□ -0.92
CTSA-218ENST00000607814 GATA1P15976 413 aaPredicted RBP9.29□□□□□ -0.92
CTSA-218ENST00000607814 SRIP30626 198 aa9.29□□□□□ -0.92
CTSA-218ENST00000607814 ASIPP42127 132 aa9.29□□□□□ -0.92
CTSA-218ENST00000607814 Q6ZSN1 163 aa9.29□□□□□ -0.92
CTSA-218ENST00000607814 SLC25A29Q8N8R3 303 aa9.29□□□□□ -0.92
CTSA-218ENST00000607814 PCNPQ8WW12 178 aaKnown RBP9.29□□□□□ -0.92
CTSA-218ENST00000607814 SAMD10Q9BYL1 202 aa9.29□□□□□ -0.92
CTSA-218ENST00000607814 ZFP30Q9Y2G7 519 aa9.29□□□□□ -0.92
CTSA-218ENST00000607814 ARMS2P0C7Q2 107 aa9.28□□□□□ -0.92
CTSA-218ENST00000607814 RPL19P84098 196 aaKnown RBP9.28□□□□□ -0.92
CTSA-218ENST00000607814 FAM162BQ5T6X4 162 aa9.28□□□□□ -0.92
CTSA-218ENST00000607814 DMRTA1Q5VZB9 504 aa9.28□□□□□ -0.92
CTSA-218ENST00000607814 FRZBQ92765 325 aa9.28□□□□□ -0.92
CTSA-218ENST00000607814 DERL1Q9BUN8 251 aa9.28□□□□□ -0.92
CTSA-218ENST00000607814 PGPEP1Q9NXJ5 209 aa9.28□□□□□ -0.92
CTSA-218ENST00000607814 Q9UF83 564 aa9.28□□□□□ -0.92
CTSA-218ENST00000607814 SULT1A2P50226 295 aa9.27□□□□□ -0.93
CTSA-218ENST00000607814 ZNF674Q2M3X9 581 aa9.27□□□□□ -0.93
CTSA-218ENST00000607814 Q5VSD8 79 aa9.27□□□□□ -0.93
CTSA-218ENST00000607814 EIF5AL1Q6IS14 154 aaKnown RBP9.27□□□□□ -0.93
CTSA-218ENST00000607814 PRR27Q6MZM9 219 aa9.27□□□□□ -0.93
CTSA-218ENST00000607814 BAGE2Q86Y30 109 aa9.27□□□□□ -0.93
CTSA-218ENST00000607814 WFDC10BQ8IUB3 73 aa9.27□□□□□ -0.93
CTSA-218ENST00000607814 MUC21A0A0G2JKD1 596 aa9.26□□□□□ -0.93
CTSA-218ENST00000607814 TRBV6-1A0A0K0K1D8 114 aa9.26□□□□□ -0.93
CTSA-218ENST00000607814 MUC21A0A140T8X8 626 aa9.26□□□□□ -0.93
CTSA-218ENST00000607814 SIVA1O15304 175 aa9.26□□□□□ -0.93
CTSA-218ENST00000607814 SSTP61278 116 aa9.26□□□□□ -0.93
CTSA-218ENST00000607814 CDPF1Q6NVV7 123 aa9.26□□□□□ -0.93
CTSA-218ENST00000607814 COX8CQ7Z4L0 72 aa9.26□□□□□ -0.93
CTSA-218ENST00000607814 BOLA1Q9Y3E2 137 aa9.26□□□□□ -0.93
CTSA-218ENST00000607814 A0A087WWL8 130 aa9.25□□□□□ -0.93
CTSA-218ENST00000607814 M0R381 172 aa9.25□□□□□ -0.93
CTSA-218ENST00000607814 RPL35P42766 123 aaKnown RBP9.25□□□□□ -0.93
CTSA-218ENST00000607814 XGP55808 180 aa9.25□□□□□ -0.93
CTSA-218ENST00000607814 TCEAL7Q9BRU2 100 aa9.25□□□□□ -0.93
CTSA-218ENST00000607814 PARLQ9H300 379 aa9.25□□□□□ -0.93
CTSA-218ENST00000607814 RAB19A4D1S5 217 aa9.24□□□□□ -0.93
CTSA-218ENST00000607814 GAGE12JA6NER3 117 aa9.24□□□□□ -0.93
CTSA-218ENST00000607814 RAB5CP51148 216 aa9.24□□□□□ -0.93
CTSA-218ENST00000607814 LINC00315P59091 139 aa9.24□□□□□ -0.93
CTSA-218ENST00000607814 GAGE1Q13065 139 aa9.24□□□□□ -0.93
CTSA-218ENST00000607814 GAGE4Q13068 117 aa9.24□□□□□ -0.93
CTSA-218ENST00000607814 GAGE5Q13069 117 aa9.24□□□□□ -0.93
CTSA-218ENST00000607814 LINC01559Q495D7 138 aa9.24□□□□□ -0.93
CTSA-218ENST00000607814 GAGE13Q4V321 117 aa9.24□□□□□ -0.93
CTSA-218ENST00000607814 C14orf178Q8N769 122 aaPredicted RBP9.24□□□□□ -0.93
CTSA-218ENST00000607814 TXNDC17Q9BRA2 123 aa9.24□□□□□ -0.93
CTSA-218ENST00000607814 MLST8Q9BVC4 326 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms