RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 CDK5RAP2Q96SN8 1893 aa-0.11□□□□□ -2.43
RNU6-88P-201ENST00000606801 PNMA8CA0A1B0GUJ8 204 aa-0.11□□□□□ -2.43
RNU6-88P-201ENST00000606801 OR2H2O95918 312 aa-0.11□□□□□ -2.43
RNU6-88P-201ENST00000606801 MT-ND4LP03901 98 aa-0.11□□□□□ -2.43
RNU6-88P-201ENST00000606801 SDC4P31431 198 aa-0.11□□□□□ -2.43
RNU6-88P-201ENST00000606801 PSPHP78330 225 aa-0.11□□□□□ -2.43
RNU6-88P-201ENST00000606801 VMO1Q7Z5L0 202 aa-0.11□□□□□ -2.43
RNU6-88P-201ENST00000606801 PYYP10082 97 aa-0.12□□□□□ -2.43
RNU6-88P-201ENST00000606801 RPS28P62857 69 aaKnown RBP-0.12□□□□□ -2.43
RNU6-88P-201ENST00000606801 OR8B8Q15620 311 aa-0.12□□□□□ -2.43
RNU6-88P-201ENST00000606801 SPRR2GQ9BYE4 73 aa-0.12□□□□□ -2.43
RNU6-88P-201ENST00000606801 DNAJC15Q9Y5T4 150 aa-0.12□□□□□ -2.43
RNU6-88P-201ENST00000606801 PTPRMP28827 1452 aa-0.12□□□□□ -2.43
RNU6-88P-201ENST00000606801 PHIPQ8WWQ0 1821 aa-0.13□□□□□ -2.43
RNU6-88P-201ENST00000606801 TRAV36DV7A0A075B6V5 113 aa-0.13□□□□□ -2.43
RNU6-88P-201ENST00000606801 TRAV17A0A0B4J275 112 aa-0.13□□□□□ -2.43
RNU6-88P-201ENST00000606801 A0A1B0GW64 132 aa-0.13□□□□□ -2.43
RNU6-88P-201ENST00000606801 DPM2O94777 84 aa-0.13□□□□□ -2.43
RNU6-88P-201ENST00000606801 HIST1H1BP16401 226 aaKnown RBP-0.13□□□□□ -2.43
RNU6-88P-201ENST00000606801 PLGLB1Q02325 96 aa-0.13□□□□□ -2.43
RNU6-88P-201ENST00000606801 TMEM91Q6ZNR0 172 aa-0.13□□□□□ -2.43
RNU6-88P-201ENST00000606801 SMIM15Q7Z3B0 74 aa-0.13□□□□□ -2.43
RNU6-88P-201ENST00000606801 OR8I2Q8N0Y5 310 aa-0.13□□□□□ -2.43
RNU6-88P-201ENST00000606801 SLC35B3Q9H1N7 401 aa-0.13□□□□□ -2.43
RNU6-88P-201ENST00000606801 MYH6P13533 1939 aa-0.13□□□□□ -2.43
RNU6-88P-201ENST00000606801 NCOR1O75376 2440 aa-0.14□□□□□ -2.43
RNU6-88P-201ENST00000606801 A0A1B0GX51 115 aa-0.14□□□□□ -2.43
RNU6-88P-201ENST00000606801 NBEAP1P0C6P0 100 aa-0.14□□□□□ -2.43
RNU6-88P-201ENST00000606801 AKR1D1P51857 326 aa-0.14□□□□□ -2.43
RNU6-88P-201ENST00000606801 EMX2Q04743 252 aa-0.14□□□□□ -2.43
RNU6-88P-201ENST00000606801 SLC25A26Q70HW3 274 aa-0.14□□□□□ -2.43
RNU6-88P-201ENST00000606801 DSCR8Q96T75 97 aa-0.14□□□□□ -2.43
RNU6-88P-201ENST00000606801 PARP14Q460N5 1801 aa-0.15□□□□□ -2.43
RNU6-88P-201ENST00000606801 TEX49A0A1B0GTD5 131 aa-0.15□□□□□ -2.43
RNU6-88P-201ENST00000606801 PAEPP09466 180 aa-0.15□□□□□ -2.43
RNU6-88P-201ENST00000606801 ELOF1P60002 83 aaKnown RBP-0.15□□□□□ -2.43
RNU6-88P-201ENST00000606801 SKA2Q8WVK7 121 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-88P-201ENST00000606801 PPDPFLQ8WWR9 84 aa-0.15□□□□□ -2.43
RNU6-88P-201ENST00000606801 GINS2Q9Y248 185 aa-0.15□□□□□ -2.43
RNU6-88P-201ENST00000606801 MUC22E2RYF6 1773 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-88P-201ENST00000606801 SOGA1O94964 1423 aa-0.15□□□□□ -2.43
RNU6-88P-201ENST00000606801 ARFGEF1Q9Y6D6 1849 aa-0.15□□□□□ -2.43
RNU6-88P-201ENST00000606801 C9JAW5 83 aa-0.16□□□□□ -2.44
RNU6-88P-201ENST00000606801 TSTD3H0UI37 97 aa-0.16□□□□□ -2.44
RNU6-88P-201ENST00000606801 TMEM244Q5VVB8 128 aa-0.16□□□□□ -2.44
RNU6-88P-201ENST00000606801 SELENOSQ9BQE4 189 aa-0.16□□□□□ -2.44
RNU6-88P-201ENST00000606801 BANF2Q9H503 90 aa-0.16□□□□□ -2.44
RNU6-88P-201ENST00000606801 SSC5DA1L4H1 1573 aa-0.16□□□□□ -2.44
RNU6-88P-201ENST00000606801 CCDC171Q6TFL3 1326 aa-0.16□□□□□ -2.44
RNU6-88P-201ENST00000606801 H0YJX3 145 aa-0.17□□□□□ -2.44
RNU6-88P-201ENST00000606801 UNC13BO14795 1591 aa-0.17□□□□□ -2.44
RNU6-88P-201ENST00000606801 TNFSF15O95150 251 aa-0.17□□□□□ -2.44
RNU6-88P-201ENST00000606801 OR2T2Q6IF00 324 aa-0.17□□□□□ -2.44
RNU6-88P-201ENST00000606801 TMEM141Q96I45 108 aa-0.17□□□□□ -2.44
RNU6-88P-201ENST00000606801 TAS2R8Q9NYW2 309 aa-0.17□□□□□ -2.44
RNU6-88P-201ENST00000606801 LAMC3Q9Y6N6 1575 aa-0.17□□□□□ -2.44
RNU6-88P-201ENST00000606801 ABCA2Q9BZC7 2435 aa-0.18□□□□□ -2.44
RNU6-88P-201ENST00000606801 A0A087WTM6 91 aa-0.18□□□□□ -2.44
RNU6-88P-201ENST00000606801 SCTP09683 121 aa-0.18□□□□□ -2.44
RNU6-88P-201ENST00000606801 NEFHP12036 1026 aa-0.18□□□□□ -2.44
RNU6-88P-201ENST00000606801 HLA-DRB4P13762 266 aa-0.18□□□□□ -2.44
RNU6-88P-201ENST00000606801 CALML5Q9NZT1 146 aa-0.18□□□□□ -2.44
RNU6-88P-201ENST00000606801 HIGD1AQ9Y241 93 aa-0.18□□□□□ -2.44
RNU6-88P-201ENST00000606801 HLA-DRB4X5D2U9 266 aa-0.18□□□□□ -2.44
RNU6-88P-201ENST00000606801 UHRF1BP1LA0JNW5 1464 aa-0.18□□□□□ -2.44
RNU6-88P-201ENST00000606801 NRXN2Q9P2S2 1712 aa-0.18□□□□□ -2.44
RNU6-88P-201ENST00000606801 SYNJ1O43426 1573 aa-0.19□□□□□ -2.44
RNU6-88P-201ENST00000606801 TRAV12-2A0A075B6T6 113 aa-0.19□□□□□ -2.44
RNU6-88P-201ENST00000606801 GNG14A0A1W2PPG7 69 aa-0.19□□□□□ -2.44
RNU6-88P-201ENST00000606801 DEGS1O15121 323 aa-0.19□□□□□ -2.44
RNU6-88P-201ENST00000606801 SLC25A6P12236 298 aa-0.19□□□□□ -2.44
RNU6-88P-201ENST00000606801 Q5BKY6 102 aa-0.19□□□□□ -2.44
RNU6-88P-201ENST00000606801 SNX29P2Q8IUI4 249 aa-0.19□□□□□ -2.44
RNU6-88P-201ENST00000606801 HSPB11Q9Y547 144 aa-0.19□□□□□ -2.44
RNU6-88P-201ENST00000606801 CDK13Q14004 1512 aaKnown RBP-0.19□□□□□ -2.44
RNU6-88P-201ENST00000606801 TRAV2A0A0B4J234 112 aa-0.2□□□□□ -2.44
RNU6-88P-201ENST00000606801 PRR15LQ9BU68 103 aa-0.2□□□□□ -2.44
RNU6-88P-201ENST00000606801 COA4Q9NYJ1 87 aa-0.2□□□□□ -2.44
RNU6-88P-201ENST00000606801 BET1LQ9NYM9 111 aa-0.2□□□□□ -2.44
RNU6-88P-201ENST00000606801 LAMB1P07942 1786 aa-0.2□□□□□ -2.44
RNU6-88P-201ENST00000606801 SSPOA2VEC9 5147 aa-0.2□□□□□ -2.44
RNU6-88P-201ENST00000606801 GVQW2A0A096LPI5 108 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-88P-201ENST00000606801 MCRIP1C9JLW8 97 aa-0.21□□□□□ -2.44
RNU6-88P-201ENST00000606801 ZNF670-ZNF695F2Z2N8 137 aa-0.21□□□□□ -2.44
RNU6-88P-201ENST00000606801 B2MP61769 119 aa-0.21□□□□□ -2.44
RNU6-88P-201ENST00000606801 TCTE3Q8IZS6 198 aa-0.21□□□□□ -2.44
RNU6-88P-201ENST00000606801 ATP6V0E2Q8NHE4 81 aa-0.21□□□□□ -2.44
RNU6-88P-201ENST00000606801 DYNLRB2Q8TF09 96 aa-0.21□□□□□ -2.44
RNU6-88P-201ENST00000606801 IFI27L1Q96BM0 104 aa-0.21□□□□□ -2.44
RNU6-88P-201ENST00000606801 LSM2Q9Y333 95 aaKnown RBP-0.21□□□□□ -2.44
RNU6-88P-201ENST00000606801 NOP16Q9Y3C1 178 aaKnown RBP-0.21□□□□□ -2.44
RNU6-88P-201ENST00000606801 APOC1P02654 83 aa-0.22□□□□□ -2.44
RNU6-88P-201ENST00000606801 NPC2P61916 151 aa-0.22□□□□□ -2.44
RNU6-88P-201ENST00000606801 CLLU1Q5K131 121 aa-0.22□□□□□ -2.44
RNU6-88P-201ENST00000606801 SPTBN2O15020 2390 aa-0.22□□□□□ -2.44
RNU6-88P-201ENST00000606801 SIPA1L3O60292 1781 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-88P-201ENST00000606801 TCRBV3S1A0A5B6 114 aa-0.23□□□□□ -2.45
RNU6-88P-201ENST00000606801 F2Z2F3 143 aa-0.23□□□□□ -2.45
RNU6-88P-201ENST00000606801 SMIM24O75264 130 aa-0.23□□□□□ -2.45
RNU6-88P-201ENST00000606801 SPINK1P00995 79 aa-0.23□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms