RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 MGPP08493 103 aa8.86□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 ZNF688P0C7X2 276 aa8.86□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 RNASE3P12724 160 aaKnown RBP8.86□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 SRSF1Q07955 248 aaKnown RBP eCLIP8.86□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 LAGE3Q14657 143 aa8.86□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 DCANP1Q8TF63 244 aa8.86□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 FAM19A4Q96LR4 140 aa8.86□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 ITPR3Q14573 2671 aa8.86□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 UBE2V1Q13404 147 aa8.86□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 DPF1Q92782 380 aa8.86□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 NIPBLQ6KC79 2804 aaeCLIP8.86□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 TMEM97Q5BJF2 176 aa8.85□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 GTSCR1Q86UQ5 136 aa8.85□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 RASL10AQ92737 203 aa8.85□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 JPT2Q9H910 190 aa8.85□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 TMEM160Q9NX00 188 aa8.85□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 TRAV12-3A0A0B4J271 114 aa8.85□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 TMEM8BA6NDV4 472 aa8.85□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 SLC25A16P16260 332 aa8.85□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 GATA3P23771 443 aa8.85□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 OR1N2Q8NGR9 330 aa8.85□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 BEX4Q9NWD9 120 aaPredicted RBP8.85□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 MTORP42345 2549 aa8.85□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 SYNJ2BPP57105 145 aa8.84□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 MRPL35Q9NZE8 188 aaKnown RBP8.84□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 CBY1Q9Y3M2 126 aa8.84□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 FLNAP21333 2647 aaKnown RBP8.84□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 TRAV12-2A0A075B6T6 113 aa8.84□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 DSCR9P59020 149 aa8.84□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 PSMG4Q5JS54 123 aa8.84□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 HIST2H2BDQ6DRA6 164 aa8.84□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 NEGR1Q7Z3B1 354 aa8.84□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 MYOZ3Q8TDC0 251 aa8.84□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 SMIM2Q9BVW6 85 aa8.84□□□□□ -0.99
HMGN3-AS1-201ENST00000604516 IGKCP01834 107 aa8.83□□□□□ -1
HMGN3-AS1-201ENST00000604516 COX6B1P14854 86 aa8.83□□□□□ -1
HMGN3-AS1-201ENST00000604516 SUMO2P61956 95 aaKnown RBP8.83□□□□□ -1
HMGN3-AS1-201ENST00000604516 ZC2HC1BQ5TFG8 222 aa8.83□□□□□ -1
HMGN3-AS1-201ENST00000604516 AMMECR1LQ6DCA0 310 aa8.83□□□□□ -1
HMGN3-AS1-201ENST00000604516 NAA38Q9BRA0 125 aaKnown RBP8.83□□□□□ -1
HMGN3-AS1-201ENST00000604516 DPH3P1Q9H4G8 78 aa8.83□□□□□ -1
HMGN3-AS1-201ENST00000604516 ZMAT4Q9H898 229 aa8.83□□□□□ -1
HMGN3-AS1-201ENST00000604516 K7EMT4 169 aa8.83□□□□□ -1
HMGN3-AS1-201ENST00000604516 MRAP2Q96G30 205 aa8.83□□□□□ -1
HMGN3-AS1-201ENST00000604516 TRAV8-6A0A0B4J262 113 aa8.82□□□□□ -1
HMGN3-AS1-201ENST00000604516 K7EP13 123 aa8.82□□□□□ -1
HMGN3-AS1-201ENST00000604516 APRG1Q8IVJ8 170 aa8.82□□□□□ -1
HMGN3-AS1-201ENST00000604516 A0A087WWL8 130 aa8.82□□□□□ -1
HMGN3-AS1-201ENST00000604516 KLLNB2CW77 178 aa8.82□□□□□ -1
HMGN3-AS1-201ENST00000604516 CD7P09564 240 aa8.82□□□□□ -1
HMGN3-AS1-201ENST00000604516 CR1P17927 2039 aa8.82□□□□□ -1
HMGN3-AS1-201ENST00000604516 ID1P41134 155 aa8.82□□□□□ -1
HMGN3-AS1-201ENST00000604516 FAM159AQ6UWV7 190 aa8.82□□□□□ -1
HMGN3-AS1-201ENST00000604516 ADAMTSL5Q6ZMM2 481 aa8.82□□□□□ -1
HMGN3-AS1-201ENST00000604516 IGHV4OR15-8A0A075B7B6 117 aa8.81□□□□□ -1
HMGN3-AS1-201ENST00000604516 A0A087WW49 117 aa8.81□□□□□ -1
HMGN3-AS1-201ENST00000604516 HOXA3O43365 443 aaPredicted RBP8.81□□□□□ -1
HMGN3-AS1-201ENST00000604516 DPM2O94777 84 aa8.81□□□□□ -1
HMGN3-AS1-201ENST00000604516 C18orf65Q6ZTR6 163 aa8.81□□□□□ -1
HMGN3-AS1-201ENST00000604516 ATP5LO75964 103 aa8.81□□□□□ -1
HMGN3-AS1-201ENST00000604516 DEFB136Q30KP8 78 aa8.81□□□□□ -1
HMGN3-AS1-201ENST00000604516 OR4C5Q8NGB2 326 aa8.81□□□□□ -1
HMGN3-AS1-201ENST00000604516 VPREB3Q9UKI3 123 aa8.81□□□□□ -1
HMGN3-AS1-201ENST00000604516 AKAP9Q99996 3911 aa8.8□□□□□ -1
HMGN3-AS1-201ENST00000604516 AP1S3Q96PC3 154 aa8.8□□□□□ -1
HMGN3-AS1-201ENST00000604516 MDFICQ9P1T7 246 aa8.8□□□□□ -1
HMGN3-AS1-201ENST00000604516 ZNF580Q9UK33 172 aa8.8□□□□□ -1
HMGN3-AS1-201ENST00000604516 JMJD1CQ15652 2540 aa8.8□□□□□ -1
HMGN3-AS1-201ENST00000604516 TENM4Q6N022 2769 aa8.8□□□□□ -1
HMGN3-AS1-201ENST00000604516 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.8□□□□□ -1
HMGN3-AS1-201ENST00000604516 K7EMI3 77 aa8.8□□□□□ -1
HMGN3-AS1-201ENST00000604516 IGHV4-31P0DP07 118 aa8.8□□□□□ -1
HMGN3-AS1-201ENST00000604516 SPINK13Q1W4C9 94 aa8.8□□□□□ -1
HMGN3-AS1-201ENST00000604516 ZNF843Q8N446 348 aa8.8□□□□□ -1
HMGN3-AS1-201ENST00000604516 OR9G4Q8NGQ1 327 aa8.8□□□□□ -1
HMGN3-AS1-201ENST00000604516 RAB37Q96AX2 223 aa8.8□□□□□ -1
HMGN3-AS1-201ENST00000604516 ITPR2Q14571 2701 aa8.79□□□□□ -1
HMGN3-AS1-201ENST00000604516 HOXD3P31249 432 aaPredicted RBP8.79□□□□□ -1
HMGN3-AS1-201ENST00000604516 LINC00315P59091 139 aa8.79□□□□□ -1
HMGN3-AS1-201ENST00000604516 SCGB3A1Q96QR1 104 aa8.79□□□□□ -1
HMGN3-AS1-201ENST00000604516 CSTL1Q9H114 145 aa8.79□□□□□ -1
HMGN3-AS1-201ENST00000604516 ZNF702PQ9H963 129 aa8.79□□□□□ -1
HMGN3-AS1-201ENST00000604516 RNF151Q2KHN1 245 aa8.79□□□□□ -1
HMGN3-AS1-201ENST00000604516 FAM74A4Q5TZK3 123 aa8.79□□□□□ -1
HMGN3-AS1-201ENST00000604516 RNASE8Q8TDE3 154 aaKnown RBP8.79□□□□□ -1
HMGN3-AS1-201ENST00000604516 DUX3Q96PT4 197 aa8.79□□□□□ -1
HMGN3-AS1-201ENST00000604516 A0A087WX48 190 aa8.78□□□□□ -1
HMGN3-AS1-201ENST00000604516 F5H697 171 aa8.78□□□□□ -1
HMGN3-AS1-201ENST00000604516 SEC11AP67812 179 aa8.78□□□□□ -1
HMGN3-AS1-201ENST00000604516 HSD52Q0P140 79 aa8.78□□□□□ -1
HMGN3-AS1-201ENST00000604516 Q6YL49 198 aa8.78□□□□□ -1
HMGN3-AS1-201ENST00000604516 MAPKAPK5-AS1Q8N8E1 139 aa8.78□□□□□ -1
HMGN3-AS1-201ENST00000604516 KIF25-AS1Q9Y6Z4 181 aa8.78□□□□□ -1
HMGN3-AS1-201ENST00000604516 TRBV7-9A0A0J9YWB2 115 aa8.78□□□□□ -1
HMGN3-AS1-201ENST00000604516 A0A0J9YX75 114 aa8.78□□□□□ -1
HMGN3-AS1-201ENST00000604516 J3QLI3 93 aa8.78□□□□□ -1
HMGN3-AS1-201ENST00000604516 SNRPD3P62318 126 aaKnown RBP8.78□□□□□ -1
HMGN3-AS1-201ENST00000604516 C2orf66Q6UXQ4 117 aa8.78□□□□□ -1
HMGN3-AS1-201ENST00000604516 TRBV25-1A0A075B6N4 114 aa8.77□□□□□ -1
HMGN3-AS1-201ENST00000604516 K7EQG2 157 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms