RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 NCOR1O75376 2440 aa16.38■□□□□ 0.21
SH3D19-211ENST00000604030 NUP210Q8TEM1 1887 aaPredicted RBP16.37■□□□□ 0.21
SH3D19-211ENST00000604030 TMEM89A2RUT3 159 aa16.37■□□□□ 0.21
SH3D19-211ENST00000604030 C11orf86A6NJI1 115 aa16.37■□□□□ 0.21
SH3D19-211ENST00000604030 H3BT86 120 aa16.37■□□□□ 0.21
SH3D19-211ENST00000604030 PIFOQ8TCI5 191 aa16.37■□□□□ 0.21
SH3D19-211ENST00000604030 RPL39LQ96EH5 51 aaKnown RBP16.37■□□□□ 0.21
SH3D19-211ENST00000604030 TINCRA0A1B0GVN0 87 aa16.37■□□□□ 0.21
SH3D19-211ENST00000604030 C3orf56Q8N813 242 aa16.37■□□□□ 0.21
SH3D19-211ENST00000604030 C16orf74Q96GX8 76 aa16.37■□□□□ 0.21
SH3D19-211ENST00000604030 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.37■□□□□ 0.21
SH3D19-211ENST00000604030 IGKV2-29A2NJV5 120 aaPredicted RBP16.37■□□□□ 0.21
SH3D19-211ENST00000604030 MUSTN1Q8IVN3 82 aa16.37■□□□□ 0.21
SH3D19-211ENST00000604030 IGLV2-23P01705 113 aa16.36■□□□□ 0.21
SH3D19-211ENST00000604030 TDRG1Q3Y452 100 aa16.36■□□□□ 0.21
SH3D19-211ENST00000604030 PRSS33Q8NF86 280 aa16.36■□□□□ 0.21
SH3D19-211ENST00000604030 DOPEY2Q9Y3R5 2298 aa16.36■□□□□ 0.21
SH3D19-211ENST00000604030 C19orf71A6NCJ1 209 aa16.36■□□□□ 0.21
SH3D19-211ENST00000604030 Q71RC1 249 aaPredicted RBP16.36■□□□□ 0.21
SH3D19-211ENST00000604030 RNASE13Q5GAN3 156 aaKnown RBP16.35■□□□□ 0.21
SH3D19-211ENST00000604030 PLXND1Q9Y4D7 1925 aa16.35■□□□□ 0.21
SH3D19-211ENST00000604030 TEX22C9J3V5 150 aa16.35■□□□□ 0.21
SH3D19-211ENST00000604030 IGLV2-14P01704 120 aa16.35■□□□□ 0.21
SH3D19-211ENST00000604030 FXYD2P54710 66 aa16.35■□□□□ 0.21
SH3D19-211ENST00000604030 K7EQD1 137 aa16.34■□□□□ 0.21
SH3D19-211ENST00000604030 A0A0J9YXV3 536 aa16.34■□□□□ 0.21
SH3D19-211ENST00000604030 NOP10Q9NPE3 64 aaKnown RBP16.34■□□□□ 0.21
SH3D19-211ENST00000604030 P0C879 139 aa16.34■□□□□ 0.21
SH3D19-211ENST00000604030 IGLV1-47P01700 117 aa16.33■□□□□ 0.21
SH3D19-211ENST00000604030 ARFGEF3Q5TH69 2177 aa16.33■□□□□ 0.21
SH3D19-211ENST00000604030 SND1-IT1Q9HBX3 110 aa16.33■□□□□ 0.21
SH3D19-211ENST00000604030 MSRB1Q9NZV6 116 aa16.33■□□□□ 0.21
SH3D19-211ENST00000604030 DEFB112Q30KQ8 113 aa16.33■□□□□ 0.2
SH3D19-211ENST00000604030 Q8N9W7 124 aa16.33■□□□□ 0.2
SH3D19-211ENST00000604030 B5MCH6 92 aa16.32■□□□□ 0.2
SH3D19-211ENST00000604030 BAALCQ8WXS3 180 aa16.32■□□□□ 0.2
SH3D19-211ENST00000604030 DKK4Q9UBT3 224 aa16.32■□□□□ 0.2
SH3D19-211ENST00000604030 DOCK9Q9BZ29 2069 aa16.32■□□□□ 0.2
SH3D19-211ENST00000604030 ODF1Q14990 250 aa16.32■□□□□ 0.2
SH3D19-211ENST00000604030 AJUBAQ96IF1 538 aa16.32■□□□□ 0.2
SH3D19-211ENST00000604030 TRBV10-2A0A0K0K1G8 114 aa16.32■□□□□ 0.2
SH3D19-211ENST00000604030 FOXI1Q12951 378 aa16.32■□□□□ 0.2
SH3D19-211ENST00000604030 KMT2EQ8IZD2 1858 aa16.31■□□□□ 0.2
SH3D19-211ENST00000604030 JMJD7-PLA2G4BH0Y9G9 81 aa16.31■□□□□ 0.2
SH3D19-211ENST00000604030 XCL1P47992 114 aa16.31■□□□□ 0.2
SH3D19-211ENST00000604030 FUSP35637 526 aaKnown RBP eCLIP16.31■□□□□ 0.2
SH3D19-211ENST00000604030 RBM3P98179 157 aaKnown RBP16.31■□□□□ 0.2
SH3D19-211ENST00000604030 SMIM20Q8N5G0 67 aa16.31■□□□□ 0.2
SH3D19-211ENST00000604030 USF3Q68DE3 2245 aa16.31■□□□□ 0.2
SH3D19-211ENST00000604030 TRAV4A0A0B4J268 109 aa16.31■□□□□ 0.2
SH3D19-211ENST00000604030 A0A1B0GXF2 115 aa16.31■□□□□ 0.2
SH3D19-211ENST00000604030 NBL1P41271 181 aa16.31■□□□□ 0.2
SH3D19-211ENST00000604030 ODF3L1Q8IXM7 274 aa16.31■□□□□ 0.2
SH3D19-211ENST00000604030 IGKV1OR2-108A0A075B7D4 117 aa16.3■□□□□ 0.2
SH3D19-211ENST00000604030 OPRPNQ99935 248 aaPredicted RBP16.3■□□□□ 0.2
SH3D19-211ENST00000604030 CXCL5P42830 114 aa16.3■□□□□ 0.2
SH3D19-211ENST00000604030 SPRNQ5BIV9 151 aa16.29■□□□□ 0.2
SH3D19-211ENST00000604030 RNASE8Q8TDE3 154 aaKnown RBP16.29■□□□□ 0.2
SH3D19-211ENST00000604030 COX7B2Q8TF08 81 aa16.29■□□□□ 0.2
SH3D19-211ENST00000604030 IGHV4-59P01825 116 aa16.29■□□□□ 0.2
SH3D19-211ENST00000604030 C5orf56Q8N8D9 126 aa16.29■□□□□ 0.2
SH3D19-211ENST00000604030 EML6Q6ZMW3 1958 aa16.29■□□□□ 0.2
SH3D19-211ENST00000604030 CCL24O00175 119 aa16.29■□□□□ 0.2
SH3D19-211ENST00000604030 DIDO1Q9BTC0 2240 aaKnown RBP16.29■□□□□ 0.2
SH3D19-211ENST00000604030 GPHB5Q86YW7 130 aa16.29■□□□□ 0.2
SH3D19-211ENST00000604030 MALRD1Q5VYJ5 2156 aa16.29■□□□□ 0.2
SH3D19-211ENST00000604030 SPTAN1Q13813 2472 aaKnown RBP16.28■□□□□ 0.2
SH3D19-211ENST00000604030 CREBBPQ92793 2442 aa16.28■□□□□ 0.2
SH3D19-211ENST00000604030 G3V4G9 280 aa16.27■□□□□ 0.2
SH3D19-211ENST00000604030 ATP5G1P05496 136 aa16.27■□□□□ 0.2
SH3D19-211ENST00000604030 WFDC2Q14508 124 aa16.27■□□□□ 0.2
SH3D19-211ENST00000604030 C2orf70A6NJV1 201 aa16.27■□□□□ 0.19
SH3D19-211ENST00000604030 RITA1Q96K30 269 aa16.27■□□□□ 0.19
SH3D19-211ENST00000604030 LINC00574Q9H8X3 128 aa16.27■□□□□ 0.19
SH3D19-211ENST00000604030 SPTBN2O15020 2390 aa16.27■□□□□ 0.19
SH3D19-211ENST00000604030 SHANK1Q9Y566 2161 aa16.26■□□□□ 0.19
SH3D19-211ENST00000604030 MRPL23Q16540 153 aaKnown RBP16.26■□□□□ 0.19
SH3D19-211ENST00000604030 COX7A2LO14548 114 aa16.26■□□□□ 0.19
SH3D19-211ENST00000604030 CADP27708 2225 aa16.26■□□□□ 0.19
SH3D19-211ENST00000604030 ZNF503Q96F45 646 aa16.26■□□□□ 0.19
SH3D19-211ENST00000604030 hADV29S1A0JD25 119 aa16.25■□□□□ 0.19
SH3D19-211ENST00000604030 MAPK1IP1LQ8NDC0 245 aa16.25■□□□□ 0.19
SH3D19-211ENST00000604030 VSIG2Q96IQ7 327 aa16.24■□□□□ 0.19
SH3D19-211ENST00000604030 C5orf38Q86SI9 138 aa16.24■□□□□ 0.19
SH3D19-211ENST00000604030 GPR179Q6PRD1 2367 aa16.24■□□□□ 0.19
SH3D19-211ENST00000604030 TRBV7-3A0A075B6L6 115 aa16.24■□□□□ 0.19
SH3D19-211ENST00000604030 TNRC6AQ8NDV7 1962 aaKnown RBP16.24■□□□□ 0.19
SH3D19-211ENST00000604030 RIF1Q5UIP0 2472 aaKnown RBP16.24■□□□□ 0.19
SH3D19-211ENST00000604030 DOCK7Q96N67 2140 aa16.23■□□□□ 0.19
SH3D19-211ENST00000604030 C1orf43Q9BWL3 253 aa16.23■□□□□ 0.19
SH3D19-211ENST00000604030 COL6A6A6NMZ7 2263 aa16.23■□□□□ 0.19
SH3D19-211ENST00000604030 PLXNB3Q9ULL4 1909 aa16.23■□□□□ 0.19
SH3D19-211ENST00000604030 PRAC2D3DTV9 90 aa16.23■□□□□ 0.19
SH3D19-211ENST00000604030 IGHV1-58A0A0C4DH39 117 aa16.23■□□□□ 0.19
SH3D19-211ENST00000604030 Q8N1Y9 231 aa16.23■□□□□ 0.19
SH3D19-211ENST00000604030 IGHG2P01859 326 aa16.22■□□□□ 0.19
SH3D19-211ENST00000604030 CACNA1BQ00975 2339 aa16.22■□□□□ 0.19
SH3D19-211ENST00000604030 PDE6GP18545 87 aa16.22■□□□□ 0.19
SH3D19-211ENST00000604030 C9orf66Q5T8R8 295 aa16.22■□□□□ 0.19
SH3D19-211ENST00000604030 HIST2H2BCQ6DN03 193 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms