RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 RS1O15537 224 aa14.35□□□□□ -0.11
PPFIA3-209ENST00000602783 RNASE3P12724 160 aaKnown RBP14.35□□□□□ -0.11
PPFIA3-209ENST00000602783 ZNF506Q5JVG8 444 aa14.35□□□□□ -0.11
PPFIA3-209ENST00000602783 CFAP126Q5VTH2 177 aa14.35□□□□□ -0.11
PPFIA3-209ENST00000602783 NHLRC2Q8NBF2 726 aa14.35□□□□□ -0.11
PPFIA3-209ENST00000602783 K7EP13 123 aa14.34□□□□□ -0.11
PPFIA3-209ENST00000602783 IGHV3-73A0A0B4J1V6 119 aa14.33□□□□□ -0.12
PPFIA3-209ENST00000602783 PGPEP1LA6NFU8 196 aa14.33□□□□□ -0.12
PPFIA3-209ENST00000602783 EPM2AB3EWF7 344 aa14.33□□□□□ -0.12
PPFIA3-209ENST00000602783 SLC25A29Q8N8R3 303 aa14.33□□□□□ -0.12
PPFIA3-209ENST00000602783 HIST1H2BAQ96A08 127 aa14.33□□□□□ -0.12
PPFIA3-209ENST00000602783 NKX6-2Q9C056 277 aaPredicted RBP14.33□□□□□ -0.12
PPFIA3-209ENST00000602783 IGKV3D-20A0A0C4DH25 116 aa14.32□□□□□ -0.12
PPFIA3-209ENST00000602783 XGP55808 180 aa14.32□□□□□ -0.12
PPFIA3-209ENST00000602783 SH2D6Q7Z4S9 175 aa14.32□□□□□ -0.12
PPFIA3-209ENST00000602783 PTH2Q96A98 100 aa14.32□□□□□ -0.12
PPFIA3-209ENST00000602783 CIDEAO60543 219 aa14.31□□□□□ -0.12
PPFIA3-209ENST00000602783 CRYGDP07320 174 aa14.31□□□□□ -0.12
PPFIA3-209ENST00000602783 ZNF345Q14585 488 aa14.31□□□□□ -0.12
PPFIA3-209ENST00000602783 RHOHQ15669 191 aa14.31□□□□□ -0.12
PPFIA3-209ENST00000602783 KCNRGQ8N5I3 272 aa14.31□□□□□ -0.12
PPFIA3-209ENST00000602783 FABP5P3A8MUU1 101 aa14.3□□□□□ -0.12
PPFIA3-209ENST00000602783 S100A4P26447 101 aaKnown RBP14.3□□□□□ -0.12
PPFIA3-209ENST00000602783 FHITP49789 147 aa14.3□□□□□ -0.12
PPFIA3-209ENST00000602783 KRTAP10-1P60331 282 aa14.3□□□□□ -0.12
PPFIA3-209ENST00000602783 C10orf126Q8N4M7 172 aa14.3□□□□□ -0.12
PPFIA3-209ENST00000602783 ZC2HC1AQ96GY0 325 aa14.3□□□□□ -0.12
PPFIA3-209ENST00000602783 PRADC1Q9BSG0 188 aa14.3□□□□□ -0.12
PPFIA3-209ENST00000602783 TRBV6-4A0A1B0GX49 114 aa14.29□□□□□ -0.12
PPFIA3-209ENST00000602783 ASIPP42127 132 aa14.29□□□□□ -0.12
PPFIA3-209ENST00000602783 TIRAPP58753 221 aa14.29□□□□□ -0.12
PPFIA3-209ENST00000602783 STOML3Q8TAV4 291 aa14.29□□□□□ -0.12
PPFIA3-209ENST00000602783 UBE2G1P62253 170 aa14.28□□□□□ -0.12
PPFIA3-209ENST00000602783 FMC1Q96HJ9 113 aa14.28□□□□□ -0.12
PPFIA3-209ENST00000602783 FAT1Q14517 4588 aa14.27□□□□□ -0.12
PPFIA3-209ENST00000602783 IGHV3-38A0A0C4DH36 116 aa14.27□□□□□ -0.13
PPFIA3-209ENST00000602783 B4DEV8 164 aa14.27□□□□□ -0.13
PPFIA3-209ENST00000602783 H3BVH4 76 aa14.27□□□□□ -0.13
PPFIA3-209ENST00000602783 SH2D1AO60880 128 aa14.27□□□□□ -0.13
PPFIA3-209ENST00000602783 MGST1P10620 155 aaKnown RBP14.27□□□□□ -0.13
PPFIA3-209ENST00000602783 CST9LP1Q5W188 147 aa14.27□□□□□ -0.13
PPFIA3-209ENST00000602783 OR11H4Q8NGC9 324 aa14.27□□□□□ -0.13
PPFIA3-209ENST00000602783 PARLQ9H300 379 aa14.27□□□□□ -0.13
PPFIA3-209ENST00000602783 M0R036 132 aa14.26□□□□□ -0.13
PPFIA3-209ENST00000602783 CRIP1P50238 77 aa14.26□□□□□ -0.13
PPFIA3-209ENST00000602783 LGALSLQ3ZCW2 172 aaPredicted RBP14.26□□□□□ -0.13
PPFIA3-209ENST00000602783 COX8CQ7Z4L0 72 aa14.26□□□□□ -0.13
PPFIA3-209ENST00000602783 TCEAL7Q9BRU2 100 aa14.26□□□□□ -0.13
PPFIA3-209ENST00000602783 ZFP30Q9Y2G7 519 aa14.26□□□□□ -0.13
PPFIA3-209ENST00000602783 HMSDA8MTL9 139 aa14.25□□□□□ -0.13
PPFIA3-209ENST00000602783 A8MWV9 139 aa14.25□□□□□ -0.13
PPFIA3-209ENST00000602783 KRBOX1C9JBD0 128 aa14.25□□□□□ -0.13
PPFIA3-209ENST00000602783 BCL2L11O43521 198 aa14.25□□□□□ -0.13
PPFIA3-209ENST00000602783 SEC11BP0C7V7 166 aa14.25□□□□□ -0.13
PPFIA3-209ENST00000602783 GCSHP23434 173 aa14.25□□□□□ -0.13
PPFIA3-209ENST00000602783 AKR1C3P42330 323 aa14.25□□□□□ -0.13
PPFIA3-209ENST00000602783 FAM162BQ5T6X4 162 aa14.25□□□□□ -0.13
PPFIA3-209ENST00000602783 FAM213BQ8TBF2 198 aa14.25□□□□□ -0.13
PPFIA3-209ENST00000602783 ZNF471Q9BX82 626 aaPredicted RBP14.25□□□□□ -0.13
PPFIA3-209ENST00000602783 IL36BQ9NZH7 164 aa14.25□□□□□ -0.13
PPFIA3-209ENST00000602783 A0A1B0GV50 99 aa14.24□□□□□ -0.13
PPFIA3-209ENST00000602783 PSCAO43653 123 aa14.24□□□□□ -0.13
PPFIA3-209ENST00000602783 OR10J3Q5JRS4 329 aa14.24□□□□□ -0.13
PPFIA3-209ENST00000602783 PIK3CD-AS1Q5SR53 167 aa14.24□□□□□ -0.13
PPFIA3-209ENST00000602783 ZFP2Q6ZN57 461 aa14.24□□□□□ -0.13
PPFIA3-209ENST00000602783 Q6ZSN1 163 aa14.24□□□□□ -0.13
PPFIA3-209ENST00000602783 TRAV8-6A0A0B4J262 113 aa14.23□□□□□ -0.13
PPFIA3-209ENST00000602783 A0A0D9SG52 128 aa14.23□□□□□ -0.13
PPFIA3-209ENST00000602783 TRBV6-1A0A0K0K1D8 114 aa14.23□□□□□ -0.13
PPFIA3-209ENST00000602783 KANTRA0A1W2PQU2 76 aa14.23□□□□□ -0.13
PPFIA3-209ENST00000602783 GRIFINA4D1Z8 144 aa14.23□□□□□ -0.13
PPFIA3-209ENST00000602783 PAGE4O60829 102 aa14.23□□□□□ -0.13
PPFIA3-209ENST00000602783 LTAP01374 205 aa14.23□□□□□ -0.13
PPFIA3-209ENST00000602783 INAFM2P0DMQ5 153 aa14.23□□□□□ -0.13
PPFIA3-209ENST00000602783 LINC01556Q5JQF7 62 aa14.23□□□□□ -0.13
PPFIA3-209ENST00000602783 SFT2D1Q8WV19 159 aa14.23□□□□□ -0.13
PPFIA3-209ENST00000602783 JPT2Q9H910 190 aa14.23□□□□□ -0.13
PPFIA3-209ENST00000602783 UMAD1C9J7I0 102 aa14.22□□□□□ -0.13
PPFIA3-209ENST00000602783 ARMS2P0C7Q2 107 aa14.22□□□□□ -0.13
PPFIA3-209ENST00000602783 DNLZQ5SXM8 178 aa14.22□□□□□ -0.13
PPFIA3-209ENST00000602783 Q5VSD8 79 aa14.22□□□□□ -0.13
PPFIA3-209ENST00000602783 ATP6V0E2Q8NHE4 81 aa14.22□□□□□ -0.13
PPFIA3-209ENST00000602783 FRZBQ92765 325 aa14.22□□□□□ -0.13
PPFIA3-209ENST00000602783 TMSB15BA0A087X1C1 80 aa14.21□□□□□ -0.13
PPFIA3-209ENST00000602783 IBA57-AS1B1ANH7 110 aa14.21□□□□□ -0.13
PPFIA3-209ENST00000602783 ZNF674Q2M3X9 581 aa14.21□□□□□ -0.13
PPFIA3-209ENST00000602783 LELP1Q5T871 98 aa14.21□□□□□ -0.13
PPFIA3-209ENST00000602783 DMRTA1Q5VZB9 504 aa14.21□□□□□ -0.13
PPFIA3-209ENST00000602783 SYT8Q8NBV8 401 aa14.21□□□□□ -0.13
PPFIA3-209ENST00000602783 MBD3L1Q8WWY6 194 aa14.21□□□□□ -0.13
PPFIA3-209ENST00000602783 SAMD10Q9BYL1 202 aa14.21□□□□□ -0.13
PPFIA3-209ENST00000602783 GTSF1LQ9H1H1 148 aa14.21□□□□□ -0.13
PPFIA3-209ENST00000602783 LRCOL1A6NCL2 159 aa14.2□□□□□ -0.14
PPFIA3-209ENST00000602783 GAGE12JA6NER3 117 aa14.2□□□□□ -0.14
PPFIA3-209ENST00000602783 LINC00694P0DN24 101 aa14.2□□□□□ -0.14
PPFIA3-209ENST00000602783 GAGE1Q13065 139 aa14.2□□□□□ -0.14
PPFIA3-209ENST00000602783 GAGE4Q13068 117 aa14.2□□□□□ -0.14
PPFIA3-209ENST00000602783 GAGE5Q13069 117 aa14.2□□□□□ -0.14
PPFIA3-209ENST00000602783 LINC01559Q495D7 138 aa14.2□□□□□ -0.14
PPFIA3-209ENST00000602783 GAGE13Q4V321 117 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms