RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 C5orf42Q9H799 3197 aa8.54□□□□□ -1.04
ZNF558-207ENST00000601372 PRAC2D3DTV9 90 aa8.54□□□□□ -1.04
ZNF558-207ENST00000601372 LINC00322Q6ZN03 302 aaPredicted RBP8.54□□□□□ -1.04
ZNF558-207ENST00000601372 IGLV2-8P01709 118 aa8.53□□□□□ -1.04
ZNF558-207ENST00000601372 COPS9Q8WXC6 57 aa8.53□□□□□ -1.04
ZNF558-207ENST00000601372 SMAD5-AS1Q9Y6J3 95 aa8.53□□□□□ -1.04
ZNF558-207ENST00000601372 A0A096LPF7 62 aa8.53□□□□□ -1.04
ZNF558-207ENST00000601372 ODF3BA8MYP8 253 aa8.53□□□□□ -1.04
ZNF558-207ENST00000601372 AGPAT4-IT1Q9H0P7 198 aa8.53□□□□□ -1.04
ZNF558-207ENST00000601372 GDF5OSQ5U4N7 250 aa8.53□□□□□ -1.04
ZNF558-207ENST00000601372 GTSF1LQ9H1H1 148 aa8.53□□□□□ -1.04
ZNF558-207ENST00000601372 IGLV11-55A0A075B6I3 123 aa8.53□□□□□ -1.04
ZNF558-207ENST00000601372 OCIAD2Q56VL3 154 aa8.53□□□□□ -1.04
ZNF558-207ENST00000601372 FOXI2Q6ZQN5 318 aa8.53□□□□□ -1.04
ZNF558-207ENST00000601372 ERG28Q9UKR5 140 aa8.53□□□□□ -1.04
ZNF558-207ENST00000601372 PTPN13Q12923 2485 aa8.53□□□□□ -1.04
ZNF558-207ENST00000601372 C2orf70A6NJV1 201 aa8.52□□□□□ -1.04
ZNF558-207ENST00000601372 LINC01559Q495D7 138 aa8.52□□□□□ -1.04
ZNF558-207ENST00000601372 EXPH5Q8NEV8 1989 aa8.52□□□□□ -1.04
ZNF558-207ENST00000601372 MYMXA0A1B0GTQ4 84 aa8.52□□□□□ -1.05
ZNF558-207ENST00000601372 SPAG8Q99932 426 aaPredicted RBP8.52□□□□□ -1.05
ZNF558-207ENST00000601372 IGHV1OR15-1A0A075B7D0 117 aa8.52□□□□□ -1.05
ZNF558-207ENST00000601372 IGHV3-38A0A0C4DH36 116 aa8.52□□□□□ -1.05
ZNF558-207ENST00000601372 CCL25O15444 150 aa8.52□□□□□ -1.05
ZNF558-207ENST00000601372 DEFB1P60022 68 aa8.52□□□□□ -1.05
ZNF558-207ENST00000601372 GAGE1Q13065 139 aa8.52□□□□□ -1.05
ZNF558-207ENST00000601372 SCRT2Q9NQ03 307 aa8.52□□□□□ -1.05
ZNF558-207ENST00000601372 HIVEP2P31629 2446 aa8.52□□□□□ -1.05
ZNF558-207ENST00000601372 WI2-2373I1.2A0A1W2PRP0 233 aa8.52□□□□□ -1.05
ZNF558-207ENST00000601372 RNASE13Q5GAN3 156 aaKnown RBP8.52□□□□□ -1.05
ZNF558-207ENST00000601372 TP73-AS1Q9UF72 201 aa8.52□□□□□ -1.05
ZNF558-207ENST00000601372 CTSGP08311 255 aa8.52□□□□□ -1.05
ZNF558-207ENST00000601372 CEND1Q8N111 149 aa8.52□□□□□ -1.05
ZNF558-207ENST00000601372 NOP10Q9NPE3 64 aaKnown RBP8.51□□□□□ -1.05
ZNF558-207ENST00000601372 GAGE12JA6NER3 117 aa8.51□□□□□ -1.05
ZNF558-207ENST00000601372 GAGE4Q13068 117 aa8.51□□□□□ -1.05
ZNF558-207ENST00000601372 GAGE5Q13069 117 aa8.51□□□□□ -1.05
ZNF558-207ENST00000601372 PRR14LQ5THK1 2151 aa8.51□□□□□ -1.05
ZNF558-207ENST00000601372 DNAL4O96015 105 aa8.51□□□□□ -1.05
ZNF558-207ENST00000601372 RPL39LQ96EH5 51 aaKnown RBP8.51□□□□□ -1.05
ZNF558-207ENST00000601372 ATP6V0BQ99437 205 aa8.51□□□□□ -1.05
ZNF558-207ENST00000601372 A8MWV9 139 aa8.51□□□□□ -1.05
ZNF558-207ENST00000601372 Q6ZSV7 163 aa8.51□□□□□ -1.05
ZNF558-207ENST00000601372 TRBV12-3P01733 135 aa8.51□□□□□ -1.05
ZNF558-207ENST00000601372 TRBV7-9A0A0J9YWB2 115 aa8.5□□□□□ -1.05
ZNF558-207ENST00000601372 M0R2P5 195 aa8.5□□□□□ -1.05
ZNF558-207ENST00000601372 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.5□□□□□ -1.05
ZNF558-207ENST00000601372 TRAV8-4A0A0B4J246 113 aa8.5□□□□□ -1.05
ZNF558-207ENST00000601372 A0A0J9YY99 117 aa8.5□□□□□ -1.05
ZNF558-207ENST00000601372 PIEZO2Q9H5I5 2752 aa8.5□□□□□ -1.05
ZNF558-207ENST00000601372 PRRC2AP48634 2157 aaKnown RBP8.5□□□□□ -1.05
ZNF558-207ENST00000601372 LINC01548A6NM66 108 aa8.5□□□□□ -1.05
ZNF558-207ENST00000601372 CGB3P0DN86 165 aa8.5□□□□□ -1.05
ZNF558-207ENST00000601372 CGB7P0DN87 165 aa8.5□□□□□ -1.05
ZNF558-207ENST00000601372 TMEM89A2RUT3 159 aa8.49□□□□□ -1.05
ZNF558-207ENST00000601372 TMEM238C9JI98 176 aa8.49□□□□□ -1.05
ZNF558-207ENST00000601372 TRPT1Q86TN4 253 aaKnown RBP8.49□□□□□ -1.05
ZNF558-207ENST00000601372 DLX4Q92988 240 aaPredicted RBP8.49□□□□□ -1.05
ZNF558-207ENST00000601372 SCGB1A1P11684 91 aa8.49□□□□□ -1.05
ZNF558-207ENST00000601372 KLF12Q9Y4X4 402 aa8.49□□□□□ -1.05
ZNF558-207ENST00000601372 TRAV13-1A0A0B4J241 112 aa8.49□□□□□ -1.05
ZNF558-207ENST00000601372 K7EP34 96 aa8.49□□□□□ -1.05
ZNF558-207ENST00000601372 ANKRD39Q53RE8 183 aa8.49□□□□□ -1.05
ZNF558-207ENST00000601372 TIMM21Q9BVV7 248 aa8.49□□□□□ -1.05
ZNF558-207ENST00000601372 A0A1W2PPM0 123 aa8.49□□□□□ -1.05
ZNF558-207ENST00000601372 SDHAF1A6NFY7 115 aa8.49□□□□□ -1.05
ZNF558-207ENST00000601372 TP53TG3Q9ULZ0 132 aa8.49□□□□□ -1.05
ZNF558-207ENST00000601372 MORN3Q6PF18 240 aaPredicted RBP8.48□□□□□ -1.05
ZNF558-207ENST00000601372 SMIM2Q9BVW6 85 aa8.48□□□□□ -1.05
ZNF558-207ENST00000601372 FSTL3O95633 263 aa8.48□□□□□ -1.05
ZNF558-207ENST00000601372 ZNF625Q96I27 306 aaPredicted RBP8.48□□□□□ -1.05
ZNF558-207ENST00000601372 ARFGEF3Q5TH69 2177 aa8.48□□□□□ -1.05
ZNF558-207ENST00000601372 INSL3P51460 131 aa8.48□□□□□ -1.05
ZNF558-207ENST00000601372 C1orf159Q96HA4 380 aa8.48□□□□□ -1.05
ZNF558-207ENST00000601372 DEFB135Q30KP9 77 aa8.48□□□□□ -1.05
ZNF558-207ENST00000601372 TTTY13Q9BZ97 58 aa8.48□□□□□ -1.05
ZNF558-207ENST00000601372 PMVKQ15126 192 aa8.47□□□□□ -1.05
ZNF558-207ENST00000601372 PLEKHB2Q96CS7 222 aa8.47□□□□□ -1.05
ZNF558-207ENST00000601372 TANC2Q9HCD6 1990 aa8.47□□□□□ -1.05
ZNF558-207ENST00000601372 WDR87Q6ZQQ6 2873 aa8.47□□□□□ -1.05
ZNF558-207ENST00000601372 HLA-DRB4P13762 266 aa8.47□□□□□ -1.05
ZNF558-207ENST00000601372 HLA-DRB4X5D2U9 266 aa8.47□□□□□ -1.05
ZNF558-207ENST00000601372 C19orf71A6NCJ1 209 aa8.47□□□□□ -1.05
ZNF558-207ENST00000601372 LINC00158P58513 81 aa8.47□□□□□ -1.05
ZNF558-207ENST00000601372 C10orf126Q8N4M7 172 aa8.47□□□□□ -1.05
ZNF558-207ENST00000601372 I3L3M4 83 aa8.47□□□□□ -1.05
ZNF558-207ENST00000601372 DEFB4AO15263 64 aa8.47□□□□□ -1.05
ZNF558-207ENST00000601372 PAX4O43316 350 aa8.47□□□□□ -1.05
ZNF558-207ENST00000601372 K7EP13 123 aa8.46□□□□□ -1.05
ZNF558-207ENST00000601372 CRLF1O75462 422 aa8.46□□□□□ -1.05
ZNF558-207ENST00000601372 HILS1P60008 231 aa8.46□□□□□ -1.05
ZNF558-207ENST00000601372 LINC01549A6NIU2 74 aa8.46□□□□□ -1.05
ZNF558-207ENST00000601372 INS-IGF2F8WCM5 200 aa8.46□□□□□ -1.05
ZNF558-207ENST00000601372 DEFB125Q8N687 156 aa8.46□□□□□ -1.05
ZNF558-207ENST00000601372 AMTNQ6UX39 209 aa8.46□□□□□ -1.05
ZNF558-207ENST00000601372 RBAKDNA6NC62 111 aa8.46□□□□□ -1.06
ZNF558-207ENST00000601372 PLCE1Q9P212 2302 aa8.46□□□□□ -1.06
ZNF558-207ENST00000601372 A0A1W2PPR1 153 aa8.46□□□□□ -1.06
ZNF558-207ENST00000601372 H3BMG7 143 aa8.46□□□□□ -1.06
ZNF558-207ENST00000601372 LINC01545Q5VT33 79 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms