RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 ACTR3CQ9C0K3 210 aaPredicted RBP11.39□□□□□ -0.59
SCAF1-204ENST00000601038 TNFSF18Q9UNG2 199 aa11.39□□□□□ -0.59
SCAF1-204ENST00000601038 RNASE3P12724 160 aaKnown RBP11.38□□□□□ -0.59
SCAF1-204ENST00000601038 ATP6V0E2Q8NHE4 81 aa11.38□□□□□ -0.59
SCAF1-204ENST00000601038 NTN5Q8WTR8 489 aaPredicted RBP11.38□□□□□ -0.59
SCAF1-204ENST00000601038 GTSF1LQ9H1H1 148 aa11.38□□□□□ -0.59
SCAF1-204ENST00000601038 A0A1W2PRE2 83 aa11.37□□□□□ -0.59
SCAF1-204ENST00000601038 MED28Q9H204 178 aa11.37□□□□□ -0.59
SCAF1-204ENST00000601038 SH3BGRL3Q9H299 93 aa11.37□□□□□ -0.59
SCAF1-204ENST00000601038 IGLV5-52A0A0A0MRZ9 124 aa11.36□□□□□ -0.59
SCAF1-204ENST00000601038 IGHV3-30P01768 117 aa11.36□□□□□ -0.59
SCAF1-204ENST00000601038 IGHV3-33P01772 117 aa11.36□□□□□ -0.59
SCAF1-204ENST00000601038 IGHV3-30-3P0DP02 117 aa11.36□□□□□ -0.59
SCAF1-204ENST00000601038 IGHV3-30-5P0DP03 117 aa11.36□□□□□ -0.59
SCAF1-204ENST00000601038 PIK3CD-AS1Q5SR53 167 aa11.36□□□□□ -0.59
SCAF1-204ENST00000601038 Q9HAA7 133 aa11.36□□□□□ -0.59
SCAF1-204ENST00000601038 IGKV3D-20A0A0C4DH25 116 aa11.35□□□□□ -0.59
SCAF1-204ENST00000601038 Q5BKY6 102 aa11.35□□□□□ -0.59
SCAF1-204ENST00000601038 ZFP2Q6ZN57 461 aa11.35□□□□□ -0.59
SCAF1-204ENST00000601038 Q8N814 137 aa11.35□□□□□ -0.59
SCAF1-204ENST00000601038 TMEM70Q9BUB7 260 aa11.35□□□□□ -0.59
SCAF1-204ENST00000601038 FABP5P3A8MUU1 101 aa11.34□□□□□ -0.59
SCAF1-204ENST00000601038 A8MWV9 139 aa11.34□□□□□ -0.59
SCAF1-204ENST00000601038 PTTG1O95997 202 aa11.34□□□□□ -0.59
SCAF1-204ENST00000601038 SMR3BP02814 79 aaPredicted RBP11.34□□□□□ -0.59
SCAF1-204ENST00000601038 LAGE3Q14657 143 aa11.34□□□□□ -0.59
SCAF1-204ENST00000601038 INO80EQ8NBZ0 244 aaPredicted RBP11.34□□□□□ -0.59
SCAF1-204ENST00000601038 LINC00479Q96M42 142 aa11.34□□□□□ -0.59
SCAF1-204ENST00000601038 PARLQ9H300 379 aa11.34□□□□□ -0.59
SCAF1-204ENST00000601038 TRAV34A0A0B4J273 112 aa11.33□□□□□ -0.6
SCAF1-204ENST00000601038 S100A4P26447 101 aaKnown RBP11.33□□□□□ -0.6
SCAF1-204ENST00000601038 Q6ZSN1 163 aa11.33□□□□□ -0.6
SCAF1-204ENST00000601038 ARL2-SNX15V9GYD0 113 aa11.33□□□□□ -0.6
SCAF1-204ENST00000601038 BORCS7-ASMTA0A0B4J1R7 106 aa11.32□□□□□ -0.6
SCAF1-204ENST00000601038 IFNA7P01567 189 aa11.32□□□□□ -0.6
SCAF1-204ENST00000601038 GIPP09681 153 aaPredicted RBP11.32□□□□□ -0.6
SCAF1-204ENST00000601038 ASIPP42127 132 aa11.32□□□□□ -0.6
SCAF1-204ENST00000601038 ZNF726P1Q15940 193 aa11.32□□□□□ -0.6
SCAF1-204ENST00000601038 LGALSLQ3ZCW2 172 aaPredicted RBP11.32□□□□□ -0.6
SCAF1-204ENST00000601038 RPL7L1Q6DKI1 246 aaKnown RBP11.32□□□□□ -0.6
SCAF1-204ENST00000601038 TM2D2Q9BX73 214 aa11.32□□□□□ -0.6
SCAF1-204ENST00000601038 CTXND1A0A1B0GTU2 59 aa11.31□□□□□ -0.6
SCAF1-204ENST00000601038 RNF222A6NCQ9 220 aa11.31□□□□□ -0.6
SCAF1-204ENST00000601038 FAM229AH3BQW9 127 aa11.31□□□□□ -0.6
SCAF1-204ENST00000601038 LINC00694P0DN24 101 aa11.31□□□□□ -0.6
SCAF1-204ENST00000601038 NKX6-2Q9C056 277 aaPredicted RBP11.31□□□□□ -0.6
SCAF1-204ENST00000601038 BATF3Q9NR55 127 aa11.31□□□□□ -0.6
SCAF1-204ENST00000601038 IL36BQ9NZH7 164 aa11.31□□□□□ -0.6
SCAF1-204ENST00000601038 GAGE12JA6NER3 117 aa11.3□□□□□ -0.6
SCAF1-204ENST00000601038 FGF8P55075 233 aaPredicted RBP11.3□□□□□ -0.6
SCAF1-204ENST00000601038 UBE2G2P60604 165 aa11.3□□□□□ -0.6
SCAF1-204ENST00000601038 HAMPP81172 84 aa11.3□□□□□ -0.6
SCAF1-204ENST00000601038 GAGE1Q13065 139 aa11.3□□□□□ -0.6
SCAF1-204ENST00000601038 GAGE4Q13068 117 aa11.3□□□□□ -0.6
SCAF1-204ENST00000601038 GAGE5Q13069 117 aa11.3□□□□□ -0.6
SCAF1-204ENST00000601038 GAGE13Q4V321 117 aa11.3□□□□□ -0.6
SCAF1-204ENST00000601038 UFSP1Q6NVU6 142 aa11.3□□□□□ -0.6
SCAF1-204ENST00000601038 OR2T35Q8NGX2 323 aa11.3□□□□□ -0.6
SCAF1-204ENST00000601038 HIST1H2BAQ96A08 127 aa11.3□□□□□ -0.6
SCAF1-204ENST00000601038 TRAV8-3A0A0A6YYJ7 113 aa11.29□□□□□ -0.6
SCAF1-204ENST00000601038 B4DEV8 164 aa11.29□□□□□ -0.6
SCAF1-204ENST00000601038 PEX7O00628 323 aa11.29□□□□□ -0.6
SCAF1-204ENST00000601038 C1QBP02746 253 aa11.29□□□□□ -0.6
SCAF1-204ENST00000601038 DNLZQ5SXM8 178 aa11.29□□□□□ -0.6
SCAF1-204ENST00000601038 DMRTA1Q5VZB9 504 aa11.29□□□□□ -0.6
SCAF1-204ENST00000601038 Q86TA4 180 aa11.29□□□□□ -0.6
SCAF1-204ENST00000601038 Q8N3U1 123 aa11.29□□□□□ -0.6
SCAF1-204ENST00000601038 SAMD10Q9BYL1 202 aa11.29□□□□□ -0.6
SCAF1-204ENST00000601038 JPT2Q9H910 190 aa11.29□□□□□ -0.6
SCAF1-204ENST00000601038 Q9UF83 564 aa11.29□□□□□ -0.6
SCAF1-204ENST00000601038 A0A087WWC5 75 aa11.28□□□□□ -0.6
SCAF1-204ENST00000601038 FXYD6-FXYD2A0A087WZ82 144 aa11.28□□□□□ -0.6
SCAF1-204ENST00000601038 FAM74A7A6NL05 159 aa11.28□□□□□ -0.6
SCAF1-204ENST00000601038 COX8CQ7Z4L0 72 aa11.28□□□□□ -0.6
SCAF1-204ENST00000601038 ZFP30Q9Y2G7 519 aa11.28□□□□□ -0.6
SCAF1-204ENST00000601038 KRBOX1C9JBD0 128 aa11.27□□□□□ -0.61
SCAF1-204ENST00000601038 H3BVH4 76 aa11.27□□□□□ -0.61
SCAF1-204ENST00000601038 RHODO00212 210 aa11.27□□□□□ -0.61
SCAF1-204ENST00000601038 CRIP1P50238 77 aa11.27□□□□□ -0.61
SCAF1-204ENST00000601038 TOR2AQ5JU69 321 aa11.27□□□□□ -0.61
SCAF1-204ENST00000601038 AKR1C8PQ5T2L2 129 aa11.27□□□□□ -0.61
SCAF1-204ENST00000601038 DAZ4Q86SG3 579 aaKnown RBP11.27□□□□□ -0.61
SCAF1-204ENST00000601038 C14orf178Q8N769 122 aaPredicted RBP11.27□□□□□ -0.61
SCAF1-204ENST00000601038 SYT8Q8NBV8 401 aa11.27□□□□□ -0.61
SCAF1-204ENST00000601038 DAZ3Q9NR90 486 aaKnown RBP11.27□□□□□ -0.61
SCAF1-204ENST00000601038 FAM30AQ9NZY2 134 aa11.27□□□□□ -0.61
SCAF1-204ENST00000601038 ARMS2P0C7Q2 107 aa11.26□□□□□ -0.61
SCAF1-204ENST00000601038 WFDC2Q14508 124 aa11.26□□□□□ -0.61
SCAF1-204ENST00000601038 ZC2HC1AQ96GY0 325 aa11.26□□□□□ -0.61
SCAF1-204ENST00000601038 M0R036 132 aa11.25□□□□□ -0.61
SCAF1-204ENST00000601038 SH2D1AO60880 128 aa11.25□□□□□ -0.61
SCAF1-204ENST00000601038 FAM162BQ5T6X4 162 aa11.25□□□□□ -0.61
SCAF1-204ENST00000601038 OR11H4Q8NGC9 324 aa11.25□□□□□ -0.61
SCAF1-204ENST00000601038 FMC1Q96HJ9 113 aa11.25□□□□□ -0.61
SCAF1-204ENST00000601038 COX11Q9Y6N1 276 aa11.25□□□□□ -0.61
SCAF1-204ENST00000601038 FAT1Q14517 4588 aa11.25□□□□□ -0.61
SCAF1-204ENST00000601038 GRIFINA4D1Z8 144 aa11.24□□□□□ -0.61
SCAF1-204ENST00000601038 PHLDA3Q9Y5J5 127 aa11.24□□□□□ -0.61
SCAF1-204ENST00000601038 FLG2Q5D862 2391 aaPredicted RBP11.24□□□□□ -0.61
SCAF1-204ENST00000601038 DMBT1Q9UGM3 2413 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms