RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 NXPH4O95158 308 aa6.78□□□□□ -1.32
HIF3A-219ENST00000600879 IGLV2-11P01706 119 aa6.78□□□□□ -1.32
HIF3A-219ENST00000600879 CDKN1BP46527 198 aa6.78□□□□□ -1.32
HIF3A-219ENST00000600879 SRSF3P84103 164 aaKnown RBP6.78□□□□□ -1.32
HIF3A-219ENST00000600879 ZNF674Q2M3X9 581 aa6.78□□□□□ -1.32
HIF3A-219ENST00000600879 ZNF493Q6ZR52 646 aa6.78□□□□□ -1.32
HIF3A-219ENST00000600879 VSIG2Q96IQ7 327 aa6.78□□□□□ -1.32
HIF3A-219ENST00000600879 FAM19A4Q96LR4 140 aa6.78□□□□□ -1.32
HIF3A-219ENST00000600879 DERL1Q9BUN8 251 aa6.78□□□□□ -1.32
HIF3A-219ENST00000600879 KLF12Q9Y4X4 402 aa6.78□□□□□ -1.32
HIF3A-219ENST00000600879 TRBV7-9A0A0J9YWB2 115 aa6.77□□□□□ -1.33
HIF3A-219ENST00000600879 TRBV6-1A0A0K0K1D8 114 aa6.77□□□□□ -1.33
HIF3A-219ENST00000600879 LINC00862A6NCI5 91 aa6.77□□□□□ -1.33
HIF3A-219ENST00000600879 GPX1P07203 203 aa6.77□□□□□ -1.33
HIF3A-219ENST00000600879 CRISP2P16562 243 aa6.77□□□□□ -1.33
HIF3A-219ENST00000600879 RPL35P42766 123 aaKnown RBP6.77□□□□□ -1.33
HIF3A-219ENST00000600879 SAPCD1Q5SSQ6 148 aa6.77□□□□□ -1.33
HIF3A-219ENST00000600879 COMMD7Q86VX2 200 aa6.77□□□□□ -1.33
HIF3A-219ENST00000600879 BAGE2Q86Y30 109 aa6.77□□□□□ -1.33
HIF3A-219ENST00000600879 ZFAND2AQ8N6M9 145 aa6.77□□□□□ -1.33
HIF3A-219ENST00000600879 LINC00612Q8N6U2 182 aa6.77□□□□□ -1.33
HIF3A-219ENST00000600879 TVP23CQ96ET8 276 aa6.77□□□□□ -1.33
HIF3A-219ENST00000600879 C8orf49Q96NF6 230 aa6.77□□□□□ -1.33
HIF3A-219ENST00000600879 PARLQ9H300 379 aa6.77□□□□□ -1.33
HIF3A-219ENST00000600879 SMDT1Q9H4I9 107 aa6.77□□□□□ -1.33
HIF3A-219ENST00000600879 PLA2G2DQ9UNK4 145 aa6.77□□□□□ -1.33
HIF3A-219ENST00000600879 ZFP30Q9Y2G7 519 aa6.77□□□□□ -1.33
HIF3A-219ENST00000600879 TRAV12-3A0A0B4J271 114 aa6.76□□□□□ -1.33
HIF3A-219ENST00000600879 C7orf71A4D174 169 aa6.76□□□□□ -1.33
HIF3A-219ENST00000600879 SNURFLB1AK76 121 aa6.76□□□□□ -1.33
HIF3A-219ENST00000600879 KLLNB2CW77 178 aa6.76□□□□□ -1.33
HIF3A-219ENST00000600879 C9JQL5 133 aa6.76□□□□□ -1.33
HIF3A-219ENST00000600879 H7BYZ3 331 aa6.76□□□□□ -1.33
HIF3A-219ENST00000600879 LTAP01374 205 aa6.76□□□□□ -1.33
HIF3A-219ENST00000600879 RNASE4P34096 147 aaKnown RBP6.76□□□□□ -1.33
HIF3A-219ENST00000600879 BTN1A1Q13410 526 aa6.76□□□□□ -1.33
HIF3A-219ENST00000600879 SMUG1Q53HV7 270 aa6.76□□□□□ -1.33
HIF3A-219ENST00000600879 CENPWQ5EE01 88 aa6.76□□□□□ -1.33
HIF3A-219ENST00000600879 PRR9Q5T870 116 aa6.76□□□□□ -1.33
HIF3A-219ENST00000600879 GFI1BQ5VTD9 330 aa6.76□□□□□ -1.33
HIF3A-219ENST00000600879 Q6ZTI0 123 aa6.76□□□□□ -1.33
HIF3A-219ENST00000600879 NHLRC2Q8NBF2 726 aa6.76□□□□□ -1.33
HIF3A-219ENST00000600879 KRTAP29-1A8MX34 341 aaPredicted RBP6.75□□□□□ -1.33
HIF3A-219ENST00000600879 H3BNG1 76 aa6.75□□□□□ -1.33
HIF3A-219ENST00000600879 GNG4P50150 75 aa6.75□□□□□ -1.33
HIF3A-219ENST00000600879 TMEM183AQ8IXX5 376 aa6.75□□□□□ -1.33
HIF3A-219ENST00000600879 SYT8Q8NBV8 401 aa6.75□□□□□ -1.33
HIF3A-219ENST00000600879 SMIM7Q9BQ49 75 aa6.75□□□□□ -1.33
HIF3A-219ENST00000600879 C20orf144Q9BQM9 153 aa6.75□□□□□ -1.33
HIF3A-219ENST00000600879 FAM30AQ9NZY2 134 aa6.75□□□□□ -1.33
HIF3A-219ENST00000600879 TRGV2A0A075B6R0 118 aa6.74□□□□□ -1.33
HIF3A-219ENST00000600879 IGLV5-52A0A0A0MRZ9 124 aa6.74□□□□□ -1.33
HIF3A-219ENST00000600879 ZNF727A8MUV8 499 aa6.74□□□□□ -1.33
HIF3A-219ENST00000600879 C9JCJ5 164 aa6.74□□□□□ -1.33
HIF3A-219ENST00000600879 GCGP01275 180 aa6.74□□□□□ -1.33
HIF3A-219ENST00000600879 SERTAD4-AS1Q5TG53 156 aa6.74□□□□□ -1.33
HIF3A-219ENST00000600879 UQCC3Q6UW78 93 aa6.74□□□□□ -1.33
HIF3A-219ENST00000600879 NFE4Q86UQ8 179 aa6.74□□□□□ -1.33
HIF3A-219ENST00000600879 ZC2HC1AQ96GY0 325 aa6.74□□□□□ -1.33
HIF3A-219ENST00000600879 TRBV20OR9-2A0A075B6H5 130 aa6.73□□□□□ -1.33
HIF3A-219ENST00000600879 TRAV21A0A0B4J279 112 aa6.73□□□□□ -1.33
HIF3A-219ENST00000600879 PGPEP1LA6NFU8 196 aa6.73□□□□□ -1.33
HIF3A-219ENST00000600879 IGHV3-53P01767 116 aa6.73□□□□□ -1.33
HIF3A-219ENST00000600879 SFTA3P0C7M3 94 aa6.73□□□□□ -1.33
HIF3A-219ENST00000600879 MGST1P10620 155 aaKnown RBP6.73□□□□□ -1.33
HIF3A-219ENST00000600879 ZNF80P51504 273 aaPredicted RBP6.73□□□□□ -1.33
HIF3A-219ENST00000600879 FAM74A3Q4VXF1 159 aa6.73□□□□□ -1.33
HIF3A-219ENST00000600879 Q6AWC8 147 aa6.73□□□□□ -1.33
HIF3A-219ENST00000600879 PRR27Q6MZM9 219 aa6.73□□□□□ -1.33
HIF3A-219ENST00000600879 EIF4E3Q8N5X7 224 aaKnown RBP6.73□□□□□ -1.33
HIF3A-219ENST00000600879 SMIM12Q96EX1 92 aa6.73□□□□□ -1.33
HIF3A-219ENST00000600879 FABP5P3A8MUU1 101 aa6.72□□□□□ -1.33
HIF3A-219ENST00000600879 SH2D1AO60880 128 aa6.72□□□□□ -1.33
HIF3A-219ENST00000600879 ZNF324O75467 553 aaPredicted RBP6.72□□□□□ -1.33
HIF3A-219ENST00000600879 IGLV2-8P01709 118 aa6.72□□□□□ -1.33
HIF3A-219ENST00000600879 PFN1P07737 140 aaKnown RBP6.72□□□□□ -1.33
HIF3A-219ENST00000600879 MUC21Q5SSG8 566 aa6.72□□□□□ -1.33
HIF3A-219ENST00000600879 FAM162BQ5T6X4 162 aa6.72□□□□□ -1.33
HIF3A-219ENST00000600879 Q6ZQT7 251 aa6.72□□□□□ -1.33
HIF3A-219ENST00000600879 COX8CQ7Z4L0 72 aa6.72□□□□□ -1.33
HIF3A-219ENST00000600879 OCC1Q8TAD7 63 aa6.72□□□□□ -1.33
HIF3A-219ENST00000600879 TMEM70Q9BUB7 260 aa6.72□□□□□ -1.33
HIF3A-219ENST00000600879 MLST8Q9BVC4 326 aa6.72□□□□□ -1.33
HIF3A-219ENST00000600879 BIN3Q9NQY0 253 aa6.72□□□□□ -1.33
HIF3A-219ENST00000600879 MSRB1Q9NZV6 116 aa6.72□□□□□ -1.33
HIF3A-219ENST00000600879 NAT8Q9UHE5 227 aa6.72□□□□□ -1.33
HIF3A-219ENST00000600879 NAGKQ9UJ70 344 aa6.72□□□□□ -1.33
HIF3A-219ENST00000600879 ICOSQ9Y6W8 199 aa6.72□□□□□ -1.33
HIF3A-219ENST00000600879 LRP1Q07954 4544 aaKnown RBP6.72□□□□□ -1.33
HIF3A-219ENST00000600879 IGHV1OR15-1A0A075B7D0 117 aa6.71□□□□□ -1.34
HIF3A-219ENST00000600879 TRGV1A0A0A0MS02 117 aa6.71□□□□□ -1.34
HIF3A-219ENST00000600879 PAX4O43316 350 aa6.71□□□□□ -1.34
HIF3A-219ENST00000600879 PLA2G1BP04054 148 aaKnown RBP6.71□□□□□ -1.34
HIF3A-219ENST00000600879 CRIP1P50238 77 aa6.71□□□□□ -1.34
HIF3A-219ENST00000600879 TMEM241Q24JQ0 296 aa6.71□□□□□ -1.34
HIF3A-219ENST00000600879 LYPD5Q6UWN5 251 aa6.71□□□□□ -1.34
HIF3A-219ENST00000600879 FAM159AQ6UWV7 190 aa6.71□□□□□ -1.34
HIF3A-219ENST00000600879 WFDC10BQ8IUB3 73 aa6.71□□□□□ -1.34
HIF3A-219ENST00000600879 LINC00528Q8N1L1 170 aa6.71□□□□□ -1.34
HIF3A-219ENST00000600879 DAZAP1Q96EP5 407 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms