RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 IGLC6P0CF74 106 aa14.18□□□□□ -0.14
SHKBP1-222ENST00000600320 MED14OSP0DP75 135 aa14.18□□□□□ -0.14
SHKBP1-222ENST00000600320 LGALS9BQ3B8N2 356 aa14.18□□□□□ -0.14
SHKBP1-222ENST00000600320 SLC7A5P1Q8MH63 180 aa14.18□□□□□ -0.14
SHKBP1-222ENST00000600320 RASL10AQ92737 203 aa14.18□□□□□ -0.14
SHKBP1-222ENST00000600320 SFRP2Q96HF1 295 aa14.18□□□□□ -0.14
SHKBP1-222ENST00000600320 SEC11CQ9BY50 192 aa14.18□□□□□ -0.14
SHKBP1-222ENST00000600320 V9GYV3 84 aa14.18□□□□□ -0.14
SHKBP1-222ENST00000600320 SNAI2O43623 268 aa14.17□□□□□ -0.14
SHKBP1-222ENST00000600320 OR10G8Q8NGN5 311 aa14.17□□□□□ -0.14
SHKBP1-222ENST00000600320 SSBP4Q9BWG4 385 aaPredicted RBP14.17□□□□□ -0.14
SHKBP1-222ENST00000600320 MUC21A0A0G2JKD1 596 aa14.16□□□□□ -0.14
SHKBP1-222ENST00000600320 MUC21A0A140T8X8 626 aa14.16□□□□□ -0.14
SHKBP1-222ENST00000600320 C10orf91Q5T1B1 145 aa14.16□□□□□ -0.14
SHKBP1-222ENST00000600320 FER1L6-AS1Q8NA97 138 aa14.16□□□□□ -0.14
SHKBP1-222ENST00000600320 OR10AG1Q8NH19 301 aa14.16□□□□□ -0.14
SHKBP1-222ENST00000600320 PTH2Q96A98 100 aa14.16□□□□□ -0.14
SHKBP1-222ENST00000600320 XKRY2A2RUG3 117 aa14.15□□□□□ -0.14
SHKBP1-222ENST00000600320 OR5AL1P0C617 328 aa14.15□□□□□ -0.14
SHKBP1-222ENST00000600320 PNRC1Q12796 327 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-222ENST00000600320 ZNF876PQ49A33 203 aa14.15□□□□□ -0.14
SHKBP1-222ENST00000600320 CT83Q5H943 113 aa14.15□□□□□ -0.14
SHKBP1-222ENST00000600320 DMRTA1Q5VZB9 504 aa14.15□□□□□ -0.14
SHKBP1-222ENST00000600320 POM121L12Q8N7R1 296 aa14.15□□□□□ -0.14
SHKBP1-222ENST00000600320 C15orf54Q8N8G6 183 aa14.15□□□□□ -0.14
SHKBP1-222ENST00000600320 GTSF1Q8WW33 167 aa14.15□□□□□ -0.14
SHKBP1-222ENST00000600320 C18orf15Q96N68 181 aa14.15□□□□□ -0.14
SHKBP1-222ENST00000600320 PHLDA3Q9Y5J5 127 aa14.15□□□□□ -0.14
SHKBP1-222ENST00000600320 TRGV2A0A075B6R0 118 aa14.14□□□□□ -0.15
SHKBP1-222ENST00000600320 MUC7Q8TAX7 377 aa14.14□□□□□ -0.15
SHKBP1-222ENST00000600320 PHLDA1Q8WV24 401 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-222ENST00000600320 TPPP3Q9BW30 176 aa14.14□□□□□ -0.15
SHKBP1-222ENST00000600320 A8MWL6 223 aa14.13□□□□□ -0.15
SHKBP1-222ENST00000600320 M0R381 172 aa14.13□□□□□ -0.15
SHKBP1-222ENST00000600320 IGHV3-53P01767 116 aa14.13□□□□□ -0.15
SHKBP1-222ENST00000600320 HTN3P15516 51 aa14.13□□□□□ -0.15
SHKBP1-222ENST00000600320 ZFAND6Q6FIF0 208 aa14.13□□□□□ -0.15
SHKBP1-222ENST00000600320 CARHSP1Q9Y2V2 147 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-222ENST00000600320 TRAV10A0A0B4J240 114 aa14.12□□□□□ -0.15
SHKBP1-222ENST00000600320 RNF212Q495C1 297 aa14.12□□□□□ -0.15
SHKBP1-222ENST00000600320 LYZL1Q6UWQ5 148 aa14.12□□□□□ -0.15
SHKBP1-222ENST00000600320 ZFP82Q8N141 532 aa14.12□□□□□ -0.15
SHKBP1-222ENST00000600320 TSKUQ8WUA8 353 aa14.12□□□□□ -0.15
SHKBP1-222ENST00000600320 JPT2Q9H910 190 aa14.12□□□□□ -0.15
SHKBP1-222ENST00000600320 DEFB131BA0A096LNP1 70 aa14.11□□□□□ -0.15
SHKBP1-222ENST00000600320 RS1O15537 224 aa14.11□□□□□ -0.15
SHKBP1-222ENST00000600320 NXPH4O95158 308 aa14.11□□□□□ -0.15
SHKBP1-222ENST00000600320 ATP5G1P05496 136 aa14.11□□□□□ -0.15
SHKBP1-222ENST00000600320 HOXA5P20719 270 aa14.11□□□□□ -0.15
SHKBP1-222ENST00000600320 CTRLP40313 264 aa14.11□□□□□ -0.15
SHKBP1-222ENST00000600320 SSTP61278 116 aa14.11□□□□□ -0.15
SHKBP1-222ENST00000600320 SYT8Q8NBV8 401 aa14.11□□□□□ -0.15
SHKBP1-222ENST00000600320 A0A1W2PPQ1 181 aa14.1□□□□□ -0.15
SHKBP1-222ENST00000600320 ZNF479Q96JC4 524 aa14.1□□□□□ -0.15
SHKBP1-222ENST00000600320 TRAV4A0A0B4J268 109 aa14.09□□□□□ -0.15
SHKBP1-222ENST00000600320 F5H768 121 aa14.09□□□□□ -0.15
SHKBP1-222ENST00000600320 FOXA3P55318 350 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-222ENST00000600320 PIK3CD-AS1Q5SR53 167 aa14.09□□□□□ -0.15
SHKBP1-222ENST00000600320 SPANXN1Q5VSR9 72 aa14.09□□□□□ -0.15
SHKBP1-222ENST00000600320 CFAP126Q5VTH2 177 aa14.09□□□□□ -0.15
SHKBP1-222ENST00000600320 PGLYRP4Q96LB8 373 aa14.09□□□□□ -0.15
SHKBP1-222ENST00000600320 SAMD10Q9BYL1 202 aa14.09□□□□□ -0.15
SHKBP1-222ENST00000600320 NACAE9PAV3 2078 aa14.09□□□□□ -0.15
SHKBP1-222ENST00000600320 F2Z2F3 143 aa14.08□□□□□ -0.16
SHKBP1-222ENST00000600320 NDUFA5Q16718 116 aa14.08□□□□□ -0.16
SHKBP1-222ENST00000600320 CEMP1Q6PRD7 247 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-222ENST00000600320 OR4C5Q8NGB2 326 aa14.08□□□□□ -0.16
SHKBP1-222ENST00000600320 NDUFAF3Q9BU61 184 aa14.08□□□□□ -0.16
SHKBP1-222ENST00000600320 GFRA4Q9GZZ7 299 aa14.08□□□□□ -0.16
SHKBP1-222ENST00000600320 MSRB1Q9NZV6 116 aa14.08□□□□□ -0.16
SHKBP1-222ENST00000600320 IGHV4-4A0A075B6R2 117 aa14.07□□□□□ -0.16
SHKBP1-222ENST00000600320 HIGD1CA8MV81 97 aa14.07□□□□□ -0.16
SHKBP1-222ENST00000600320 MT-ND4LP03901 98 aa14.07□□□□□ -0.16
SHKBP1-222ENST00000600320 CACNG7P62955 275 aa14.07□□□□□ -0.16
SHKBP1-222ENST00000600320 FHL2Q14192 279 aa14.07□□□□□ -0.16
SHKBP1-222ENST00000600320 SMIM27A0A1W2PRY6 76 aa14.06□□□□□ -0.16
SHKBP1-222ENST00000600320 A8MWV9 139 aa14.06□□□□□ -0.16
SHKBP1-222ENST00000600320 PPP1R2P9O14990 202 aa14.06□□□□□ -0.16
SHKBP1-222ENST00000600320 ANAPC16Q96DE5 110 aa14.06□□□□□ -0.16
SHKBP1-222ENST00000600320 CNFNQ9BYD5 112 aa14.06□□□□□ -0.16
SHKBP1-222ENST00000600320 DNAH7Q8WXX0 4024 aa14.06□□□□□ -0.16
SHKBP1-222ENST00000600320 IGHV3-73A0A0B4J1V6 119 aa14.05□□□□□ -0.16
SHKBP1-222ENST00000600320 FAM231BA6NCW3 169 aa14.05□□□□□ -0.16
SHKBP1-222ENST00000600320 NUPR2A6NF83 97 aa14.05□□□□□ -0.16
SHKBP1-222ENST00000600320 APOC3P02656 99 aa14.05□□□□□ -0.16
SHKBP1-222ENST00000600320 CRYGDP07320 174 aa14.05□□□□□ -0.16
SHKBP1-222ENST00000600320 UFSP1Q6NVU6 142 aa14.05□□□□□ -0.16
SHKBP1-222ENST00000600320 WDR73Q6P4I2 378 aa14.05□□□□□ -0.16
SHKBP1-222ENST00000600320 CLRN3Q8NCR9 226 aa14.05□□□□□ -0.16
SHKBP1-222ENST00000600320 NUP35Q8NFH5 326 aa14.05□□□□□ -0.16
SHKBP1-222ENST00000600320 A0A087WWL8 130 aa14.04□□□□□ -0.16
SHKBP1-222ENST00000600320 C3orf84H3BNL1 204 aa14.04□□□□□ -0.16
SHKBP1-222ENST00000600320 NTF3P20783 257 aa14.04□□□□□ -0.16
SHKBP1-222ENST00000600320 TRGV4A0A0C4DH28 118 aa14.03□□□□□ -0.16
SHKBP1-222ENST00000600320 C7orf77A4D0Y5 90 aa14.03□□□□□ -0.16
SHKBP1-222ENST00000600320 TMEM88Q6PEY1 159 aa14.03□□□□□ -0.16
SHKBP1-222ENST00000600320 Q6ZSN1 163 aa14.03□□□□□ -0.16
SHKBP1-222ENST00000600320 NAT8BQ9UHF3 227 aa14.03□□□□□ -0.16
SHKBP1-222ENST00000600320 IGLL5B9A064 214 aa14.02□□□□□ -0.17
SHKBP1-222ENST00000600320 CASC10Q5T4H9 136 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms