RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 TRAV9-2A0A087WT02 112 aa11.81□□□□□ -0.52
SSBP4-207ENST00000600244 SCO2A0A1W2PP80 73 aa11.81□□□□□ -0.52
SSBP4-207ENST00000600244 RBFOX3A6NFN3 312 aa11.81□□□□□ -0.52
SSBP4-207ENST00000600244 F6UZH7 168 aa11.81□□□□□ -0.52
SSBP4-207ENST00000600244 NDUFS6O75380 124 aaKnown RBP11.81□□□□□ -0.52
SSBP4-207ENST00000600244 HTN1P15515 57 aa11.81□□□□□ -0.52
SSBP4-207ENST00000600244 FLI1Q01543 452 aaPredicted RBP11.81□□□□□ -0.52
SSBP4-207ENST00000600244 ZNF506Q5JVG8 444 aa11.81□□□□□ -0.52
SSBP4-207ENST00000600244 GFI1BQ5VTD9 330 aa11.81□□□□□ -0.52
SSBP4-207ENST00000600244 TMEM263Q8WUH6 116 aaKnown RBP11.81□□□□□ -0.52
SSBP4-207ENST00000600244 SGK494Q96LW2 274 aa11.81□□□□□ -0.52
SSBP4-207ENST00000600244 FAM210AQ96ND0 272 aa11.81□□□□□ -0.52
SSBP4-207ENST00000600244 TRAV34A0A0B4J273 112 aa11.8□□□□□ -0.52
SSBP4-207ENST00000600244 GAGE12BA1L429 117 aa11.8□□□□□ -0.52
SSBP4-207ENST00000600244 GAGE7O76087 117 aa11.8□□□□□ -0.52
SSBP4-207ENST00000600244 GAGE12FP0CL80 117 aa11.8□□□□□ -0.52
SSBP4-207ENST00000600244 GAGE12GP0CL81 117 aa11.8□□□□□ -0.52
SSBP4-207ENST00000600244 GAGE12IP0CL82 117 aa11.8□□□□□ -0.52
SSBP4-207ENST00000600244 TMEM183BQ1AE95 376 aa11.8□□□□□ -0.52
SSBP4-207ENST00000600244 PRR9Q5T870 116 aa11.8□□□□□ -0.52
SSBP4-207ENST00000600244 C20orf144Q9BQM9 153 aa11.8□□□□□ -0.52
SSBP4-207ENST00000600244 PDE6DO43924 150 aa11.79□□□□□ -0.52
SSBP4-207ENST00000600244 ZNF324O75467 553 aaPredicted RBP11.79□□□□□ -0.52
SSBP4-207ENST00000600244 CLLU1Q5K131 121 aa11.79□□□□□ -0.52
SSBP4-207ENST00000600244 COX8CQ7Z4L0 72 aa11.79□□□□□ -0.52
SSBP4-207ENST00000600244 Q86TA4 180 aa11.79□□□□□ -0.52
SSBP4-207ENST00000600244 FMC1Q96HJ9 113 aa11.79□□□□□ -0.52
SSBP4-207ENST00000600244 TNXBP22105 4242 aa11.79□□□□□ -0.52
SSBP4-207ENST00000600244 C7orf71A4D174 169 aa11.78□□□□□ -0.52
SSBP4-207ENST00000600244 K7EP13 123 aa11.78□□□□□ -0.52
SSBP4-207ENST00000600244 RGS13O14921 159 aa11.78□□□□□ -0.52
SSBP4-207ENST00000600244 S100A9P06702 114 aaKnown RBP11.78□□□□□ -0.52
SSBP4-207ENST00000600244 PRNTQ86SH4 94 aa11.78□□□□□ -0.52
SSBP4-207ENST00000600244 Q8N814 137 aa11.78□□□□□ -0.52
SSBP4-207ENST00000600244 KRTAP9-2Q9BYQ4 174 aa11.78□□□□□ -0.52
SSBP4-207ENST00000600244 LTAP01374 205 aa11.77□□□□□ -0.53
SSBP4-207ENST00000600244 GPX1P07203 203 aa11.77□□□□□ -0.53
SSBP4-207ENST00000600244 MT1HL1P0DM35 61 aa11.77□□□□□ -0.53
SSBP4-207ENST00000600244 AKR1C3P42330 323 aa11.77□□□□□ -0.53
SSBP4-207ENST00000600244 BTN1A1Q13410 526 aa11.77□□□□□ -0.53
SSBP4-207ENST00000600244 SAPCD1Q5SSQ6 148 aa11.77□□□□□ -0.53
SSBP4-207ENST00000600244 Q6AWC8 147 aa11.77□□□□□ -0.53
SSBP4-207ENST00000600244 LINC00467Q9BRT7 94 aa11.77□□□□□ -0.53
SSBP4-207ENST00000600244 TREM1Q9NP99 234 aa11.77□□□□□ -0.53
SSBP4-207ENST00000600244 LY96Q9Y6Y9 160 aa11.77□□□□□ -0.53
SSBP4-207ENST00000600244 TMEM250H0YL14 139 aa11.76□□□□□ -0.53
SSBP4-207ENST00000600244 RNASE4P34096 147 aaKnown RBP11.76□□□□□ -0.53
SSBP4-207ENST00000600244 ASIPP42127 132 aa11.76□□□□□ -0.53
SSBP4-207ENST00000600244 RAB14P61106 215 aa11.76□□□□□ -0.53
SSBP4-207ENST00000600244 TOR2AQ5JU69 321 aa11.76□□□□□ -0.53
SSBP4-207ENST00000600244 C8orf49Q96NF6 230 aa11.76□□□□□ -0.53
SSBP4-207ENST00000600244 ZFP30Q9Y2G7 519 aa11.76□□□□□ -0.53
SSBP4-207ENST00000600244 TRAV12-3A0A0B4J271 114 aa11.75□□□□□ -0.53
SSBP4-207ENST00000600244 J3KRW8 73 aa11.75□□□□□ -0.53
SSBP4-207ENST00000600244 RPL35P42766 123 aaKnown RBP11.75□□□□□ -0.53
SSBP4-207ENST00000600244 ZNF80P51504 273 aaPredicted RBP11.75□□□□□ -0.53
SSBP4-207ENST00000600244 LYPD5Q6UWN5 251 aa11.75□□□□□ -0.53
SSBP4-207ENST00000600244 Q6ZQT7 251 aa11.75□□□□□ -0.53
SSBP4-207ENST00000600244 NDFIP1Q9BT67 221 aa11.75□□□□□ -0.53
SSBP4-207ENST00000600244 DERL1Q9BUN8 251 aa11.75□□□□□ -0.53
SSBP4-207ENST00000600244 MLST8Q9BVC4 326 aa11.75□□□□□ -0.53
SSBP4-207ENST00000600244 H7BYZ3 331 aa11.74□□□□□ -0.53
SSBP4-207ENST00000600244 SRP19P09132 144 aaKnown RBP11.74□□□□□ -0.53
SSBP4-207ENST00000600244 UBE2G1P62253 170 aa11.74□□□□□ -0.53
SSBP4-207ENST00000600244 TMEM183AQ8IXX5 376 aa11.74□□□□□ -0.53
SSBP4-207ENST00000600244 EIF5A2Q9GZV4 153 aaKnown RBP11.74□□□□□ -0.53
SSBP4-207ENST00000600244 MED9Q9NWA0 146 aa11.74□□□□□ -0.53
SSBP4-207ENST00000600244 TRBV20OR9-2A0A075B6H5 130 aa11.73□□□□□ -0.53
SSBP4-207ENST00000600244 C9JQL5 133 aa11.73□□□□□ -0.53
SSBP4-207ENST00000600244 SRSF3P84103 164 aaKnown RBP11.73□□□□□ -0.53
SSBP4-207ENST00000600244 SMUG1Q53HV7 270 aa11.73□□□□□ -0.53
SSBP4-207ENST00000600244 SCXQ7RTU7 201 aa11.73□□□□□ -0.53
SSBP4-207ENST00000600244 PYGO2Q9BRQ0 406 aa11.73□□□□□ -0.53
SSBP4-207ENST00000600244 SMDT1Q9H4I9 107 aa11.73□□□□□ -0.53
SSBP4-207ENST00000600244 GCGP01275 180 aa11.72□□□□□ -0.53
SSBP4-207ENST00000600244 IGLV2-8P01709 118 aa11.72□□□□□ -0.53
SSBP4-207ENST00000600244 CRIP1P50238 77 aa11.72□□□□□ -0.53
SSBP4-207ENST00000600244 ZC2HC1AQ96GY0 325 aa11.72□□□□□ -0.53
SSBP4-207ENST00000600244 ICOSQ9Y6W8 199 aa11.72□□□□□ -0.53
SSBP4-207ENST00000600244 RAB19A4D1S5 217 aa11.71□□□□□ -0.53
SSBP4-207ENST00000600244 EVI2AP22794 236 aa11.71□□□□□ -0.53
SSBP4-207ENST00000600244 TDRG1Q3Y452 100 aa11.71□□□□□ -0.53
SSBP4-207ENST00000600244 Q6ZTI0 123 aa11.71□□□□□ -0.53
SSBP4-207ENST00000600244 BAGE2Q86Y30 109 aa11.71□□□□□ -0.53
SSBP4-207ENST00000600244 TRAV21A0A0B4J279 112 aa11.7□□□□□ -0.54
SSBP4-207ENST00000600244 C9JCJ5 164 aa11.7□□□□□ -0.54
SSBP4-207ENST00000600244 PFN1P07737 140 aaKnown RBP11.7□□□□□ -0.54
SSBP4-207ENST00000600244 DAZ2Q13117 558 aaKnown RBP11.7□□□□□ -0.54
SSBP4-207ENST00000600244 PEA15Q15121 130 aa11.7□□□□□ -0.54
SSBP4-207ENST00000600244 ZNF674Q2M3X9 581 aa11.7□□□□□ -0.54
SSBP4-207ENST00000600244 CENPWQ5EE01 88 aa11.7□□□□□ -0.54
SSBP4-207ENST00000600244 WFDC10BQ8IUB3 73 aa11.7□□□□□ -0.54
SSBP4-207ENST00000600244 SMIM12Q96EX1 92 aa11.7□□□□□ -0.54
SSBP4-207ENST00000600244 PARLQ9H300 379 aa11.7□□□□□ -0.54
SSBP4-207ENST00000600244 C11orf21Q9P2W6 132 aa11.7□□□□□ -0.54
SSBP4-207ENST00000600244 IGHV1OR15-1A0A075B7D0 117 aa11.69□□□□□ -0.54
SSBP4-207ENST00000600244 PSCAO43653 123 aa11.69□□□□□ -0.54
SSBP4-207ENST00000600244 ANXA2RQ3ZCQ2 193 aa11.69□□□□□ -0.54
SSBP4-207ENST00000600244 FABP5P3A8MUU1 101 aa11.68□□□□□ -0.54
SSBP4-207ENST00000600244 SNURFLB1AK76 121 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms