RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 LINC01551Q86U37 167 aa7.91□□□□□ -1.14
HIF3A-217ENST00000600236 LYPD1Q8N2G4 141 aa7.91□□□□□ -1.14
HIF3A-217ENST00000600236 ZFAND2AQ8N6M9 145 aa7.91□□□□□ -1.14
HIF3A-217ENST00000600236 ANAPC16Q96DE5 110 aa7.91□□□□□ -1.14
HIF3A-217ENST00000600236 VSIG2Q96IQ7 327 aa7.91□□□□□ -1.14
HIF3A-217ENST00000600236 DERL1Q9BUN8 251 aa7.91□□□□□ -1.14
HIF3A-217ENST00000600236 KLF12Q9Y4X4 402 aa7.91□□□□□ -1.14
HIF3A-217ENST00000600236 ICOSQ9Y6W8 199 aa7.91□□□□□ -1.14
HIF3A-217ENST00000600236 DYNC1H1Q14204 4646 aaKnown RBP7.9□□□□□ -1.14
HIF3A-217ENST00000600236 A0A096LPF7 62 aa7.9□□□□□ -1.14
HIF3A-217ENST00000600236 RBAKDNA6NC62 111 aa7.9□□□□□ -1.14
HIF3A-217ENST00000600236 PAX4O43316 350 aa7.9□□□□□ -1.14
HIF3A-217ENST00000600236 SPATA12Q7Z6I5 190 aa7.9□□□□□ -1.14
HIF3A-217ENST00000600236 ISOC2Q96AB3 205 aa7.9□□□□□ -1.14
HIF3A-217ENST00000600236 VGLL1Q99990 258 aa7.9□□□□□ -1.14
HIF3A-217ENST00000600236 PRO0255Q9UI72 69 aa7.9□□□□□ -1.14
HIF3A-217ENST00000600236 PPP1R2P9O14990 202 aa7.89□□□□□ -1.15
HIF3A-217ENST00000600236 SIVA1O15304 175 aa7.89□□□□□ -1.15
HIF3A-217ENST00000600236 IGHV3-53P01767 116 aa7.89□□□□□ -1.15
HIF3A-217ENST00000600236 RAB5AP20339 215 aa7.89□□□□□ -1.15
HIF3A-217ENST00000600236 RPL35P42766 123 aaKnown RBP7.89□□□□□ -1.15
HIF3A-217ENST00000600236 RANP62826 216 aaKnown RBP7.89□□□□□ -1.15
HIF3A-217ENST00000600236 SUMO1P63165 101 aaKnown RBP7.89□□□□□ -1.15
HIF3A-217ENST00000600236 KRTAP1-5Q9BYS1 174 aa7.89□□□□□ -1.15
HIF3A-217ENST00000600236 MRPL16Q9NX20 251 aaKnown RBP7.89□□□□□ -1.15
HIF3A-217ENST00000600236 TRBV24-1A0A075B6N3 115 aa7.88□□□□□ -1.15
HIF3A-217ENST00000600236 PEX7O00628 323 aa7.88□□□□□ -1.15
HIF3A-217ENST00000600236 FLI1Q01543 452 aaPredicted RBP7.88□□□□□ -1.15
HIF3A-217ENST00000600236 ELOBQ15370 118 aa7.88□□□□□ -1.15
HIF3A-217ENST00000600236 MRPL23Q16540 153 aaKnown RBP7.88□□□□□ -1.15
HIF3A-217ENST00000600236 PRR9Q5T870 116 aa7.88□□□□□ -1.15
HIF3A-217ENST00000600236 FAM159AQ6UWV7 190 aa7.88□□□□□ -1.15
HIF3A-217ENST00000600236 MAPKAPK5-AS1Q8N8E1 139 aa7.88□□□□□ -1.15
HIF3A-217ENST00000600236 C5orf17Q8NAS9 161 aa7.88□□□□□ -1.15
HIF3A-217ENST00000600236 Q8TAT8 98 aa7.88□□□□□ -1.15
HIF3A-217ENST00000600236 IMMP2LQ96T52 175 aa7.88□□□□□ -1.15
HIF3A-217ENST00000600236 OTORQ9NRC9 128 aa7.88□□□□□ -1.15
HIF3A-217ENST00000600236 TP53TG3Q9ULZ0 132 aa7.88□□□□□ -1.15
HIF3A-217ENST00000600236 LENEPQ9Y5L5 61 aa7.88□□□□□ -1.15
HIF3A-217ENST00000600236 DNAH17Q9UFH2 4485 aa7.88□□□□□ -1.15
HIF3A-217ENST00000600236 TRGV11A0A075B6L2 103 aa7.87□□□□□ -1.15
HIF3A-217ENST00000600236 TRGV4A0A0C4DH28 118 aa7.87□□□□□ -1.15
HIF3A-217ENST00000600236 EREGO14944 169 aa7.87□□□□□ -1.15
HIF3A-217ENST00000600236 NXPH4O95158 308 aa7.87□□□□□ -1.15
HIF3A-217ENST00000600236 S100A9P06702 114 aaKnown RBP7.87□□□□□ -1.15
HIF3A-217ENST00000600236 PFN1P07737 140 aaKnown RBP7.87□□□□□ -1.15
HIF3A-217ENST00000600236 LINC00315P59091 139 aa7.87□□□□□ -1.15
HIF3A-217ENST00000600236 CENPWQ5EE01 88 aa7.87□□□□□ -1.15
HIF3A-217ENST00000600236 CMTM2Q8TAZ6 248 aa7.87□□□□□ -1.15
HIF3A-217ENST00000600236 SMIM12Q96EX1 92 aa7.87□□□□□ -1.15
HIF3A-217ENST00000600236 SPXQ9BT56 116 aa7.87□□□□□ -1.15
HIF3A-217ENST00000600236 EPDR1Q9UM22 224 aa7.87□□□□□ -1.15
HIF3A-217ENST00000600236 HHLA3Q9XRX5 114 aa7.87□□□□□ -1.15
HIF3A-217ENST00000600236 TRAV9-2A0A087WT02 112 aa7.86□□□□□ -1.15
HIF3A-217ENST00000600236 TRBV6-1A0A0K0K1D8 114 aa7.86□□□□□ -1.15
HIF3A-217ENST00000600236 LOC105371267A0A1B0GV96 52 aa7.86□□□□□ -1.15
HIF3A-217ENST00000600236 DIRC3C9JPN6 131 aa7.86□□□□□ -1.15
HIF3A-217ENST00000600236 SRIP30626 198 aa7.86□□□□□ -1.15
HIF3A-217ENST00000600236 GNG4P50150 75 aa7.86□□□□□ -1.15
HIF3A-217ENST00000600236 CRYBA4P53673 196 aa7.86□□□□□ -1.15
HIF3A-217ENST00000600236 TMEM183BQ1AE95 376 aa7.86□□□□□ -1.15
HIF3A-217ENST00000600236 MUC21Q5SSG8 566 aa7.86□□□□□ -1.15
HIF3A-217ENST00000600236 Q6AWC8 147 aa7.86□□□□□ -1.15
HIF3A-217ENST00000600236 NEGR1Q7Z3B1 354 aa7.86□□□□□ -1.15
HIF3A-217ENST00000600236 ARL6IP6Q8N6S5 226 aa7.86□□□□□ -1.15
HIF3A-217ENST00000600236 OCC1Q8TAD7 63 aa7.86□□□□□ -1.15
HIF3A-217ENST00000600236 SFRP2Q96HF1 295 aa7.86□□□□□ -1.15
HIF3A-217ENST00000600236 C8orf49Q96NF6 230 aa7.86□□□□□ -1.15
HIF3A-217ENST00000600236 TRAV9-1A0A075B6T8 112 aa7.85□□□□□ -1.15
HIF3A-217ENST00000600236 K7EN84 100 aa7.85□□□□□ -1.15
HIF3A-217ENST00000600236 GCGP01275 180 aa7.85□□□□□ -1.15
HIF3A-217ENST00000600236 IGLV2-8P01709 118 aa7.85□□□□□ -1.15
HIF3A-217ENST00000600236 ORM1P02763 201 aa7.85□□□□□ -1.15
HIF3A-217ENST00000600236 CXCL1P09341 107 aa7.85□□□□□ -1.15
HIF3A-217ENST00000600236 S100PP25815 95 aa7.85□□□□□ -1.15
HIF3A-217ENST00000600236 ERVFC1-1P60608 527 aa7.85□□□□□ -1.15
HIF3A-217ENST00000600236 FHL2Q14192 279 aa7.85□□□□□ -1.15
HIF3A-217ENST00000600236 NFE4Q86UQ8 179 aa7.85□□□□□ -1.15
HIF3A-217ENST00000600236 BTF3L4Q96K17 158 aa7.85□□□□□ -1.15
HIF3A-217ENST00000600236 OSTCQ9NRP0 149 aa7.85□□□□□ -1.15
HIF3A-217ENST00000600236 RPH3ALQ9UNE2 315 aa7.85□□□□□ -1.15
HIF3A-217ENST00000600236 PKHD1P08F94 4074 aa7.84□□□□□ -1.15
HIF3A-217ENST00000600236 PGPA6NDG6 321 aa7.84□□□□□ -1.15
HIF3A-217ENST00000600236 PGPEP1LA6NFU8 196 aa7.84□□□□□ -1.15
HIF3A-217ENST00000600236 C1orf196B1AJZ1 125 aa7.84□□□□□ -1.15
HIF3A-217ENST00000600236 K7EP13 123 aa7.84□□□□□ -1.15
HIF3A-217ENST00000600236 TCRAP04437 139 aa7.84□□□□□ -1.15
HIF3A-217ENST00000600236 TYMSP04818 313 aa7.84□□□□□ -1.15
HIF3A-217ENST00000600236 RAB5BP61020 215 aa7.84□□□□□ -1.15
HIF3A-217ENST00000600236 LYPD5Q6UWN5 251 aa7.84□□□□□ -1.15
HIF3A-217ENST00000600236 Q6ZQT7 251 aa7.84□□□□□ -1.15
HIF3A-217ENST00000600236 TMEM183AQ8IXX5 376 aa7.84□□□□□ -1.15
HIF3A-217ENST00000600236 OR10G8Q8NGN5 311 aa7.84□□□□□ -1.15
HIF3A-217ENST00000600236 RASL10AQ92737 203 aa7.84□□□□□ -1.15
HIF3A-217ENST00000600236 FMC1Q96HJ9 113 aa7.84□□□□□ -1.15
HIF3A-217ENST00000600236 NAGKQ9UJ70 344 aa7.84□□□□□ -1.15
HIF3A-217ENST00000600236 PCLOQ9Y6V0 5065 aa7.83□□□□□ -1.16
HIF3A-217ENST00000600236 TGIF2-C20orf24A0A0A6YYL0 155 aa7.83□□□□□ -1.16
HIF3A-217ENST00000600236 TRAV21A0A0B4J279 112 aa7.83□□□□□ -1.16
HIF3A-217ENST00000600236 SERTM2A0A1B0GWG4 89 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms