RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TMEM88Q6PEY1 159 aa9.62□□□□□ -0.87
VRK3-219ENST00000600137 FAM210BQ96KR6 192 aa9.62□□□□□ -0.87
VRK3-219ENST00000600137 SSBP4Q9BWG4 385 aaPredicted RBP9.62□□□□□ -0.87
VRK3-219ENST00000600137 TRGV2A0A075B6R0 118 aa9.61□□□□□ -0.87
VRK3-219ENST00000600137 MGST1P10620 155 aaKnown RBP9.61□□□□□ -0.87
VRK3-219ENST00000600137 ASIPP42127 132 aa9.61□□□□□ -0.87
VRK3-219ENST00000600137 ZNF876PQ49A33 203 aa9.61□□□□□ -0.87
VRK3-219ENST00000600137 NUDT10Q8NFP7 164 aa9.61□□□□□ -0.87
VRK3-219ENST00000600137 NUDT11Q96G61 164 aa9.61□□□□□ -0.87
VRK3-219ENST00000600137 VSIG2Q96IQ7 327 aa9.61□□□□□ -0.87
VRK3-219ENST00000600137 ZNF479Q96JC4 524 aa9.61□□□□□ -0.87
VRK3-219ENST00000600137 SMDT1Q9H4I9 107 aa9.61□□□□□ -0.87
VRK3-219ENST00000600137 LY96Q9Y6Y9 160 aa9.61□□□□□ -0.87
VRK3-219ENST00000600137 KMT2AQ03164 3969 aa9.61□□□□□ -0.87
VRK3-219ENST00000600137 LCE6AA0A183 80 aa9.6□□□□□ -0.87
VRK3-219ENST00000600137 H3BVH4 76 aa9.6□□□□□ -0.87
VRK3-219ENST00000600137 RS1O15537 224 aa9.6□□□□□ -0.87
VRK3-219ENST00000600137 IGHV3-53P01767 116 aa9.6□□□□□ -0.87
VRK3-219ENST00000600137 SFTA3P0C7M3 94 aa9.6□□□□□ -0.87
VRK3-219ENST00000600137 DMRTA1Q5VZB9 504 aa9.6□□□□□ -0.87
VRK3-219ENST00000600137 TRAV4A0A0B4J268 109 aa9.59□□□□□ -0.87
VRK3-219ENST00000600137 SNAI2O43623 268 aa9.59□□□□□ -0.87
VRK3-219ENST00000600137 S100A4P26447 101 aaKnown RBP9.59□□□□□ -0.87
VRK3-219ENST00000600137 CEBPGP53567 150 aa9.59□□□□□ -0.87
VRK3-219ENST00000600137 PEA15Q15121 130 aa9.59□□□□□ -0.87
VRK3-219ENST00000600137 PIK3CD-AS1Q5SR53 167 aa9.59□□□□□ -0.87
VRK3-219ENST00000600137 CFAP126Q5VTH2 177 aa9.59□□□□□ -0.87
VRK3-219ENST00000600137 SMIM7Q9BQ49 75 aa9.59□□□□□ -0.87
VRK3-219ENST00000600137 NDUFAF3Q9BU61 184 aa9.59□□□□□ -0.87
VRK3-219ENST00000600137 JPT2Q9H910 190 aa9.59□□□□□ -0.87
VRK3-219ENST00000600137 TRAV26-1A0A087WT03 109 aa9.58□□□□□ -0.88
VRK3-219ENST00000600137 ZNF727A8MUV8 499 aa9.58□□□□□ -0.88
VRK3-219ENST00000600137 IGLC6P0CF74 106 aa9.58□□□□□ -0.88
VRK3-219ENST00000600137 MED14OSP0DP75 135 aa9.58□□□□□ -0.88
VRK3-219ENST00000600137 GZMBP10144 247 aa9.58□□□□□ -0.88
VRK3-219ENST00000600137 RAB14P61106 215 aa9.58□□□□□ -0.88
VRK3-219ENST00000600137 UFSP1Q6NVU6 142 aa9.58□□□□□ -0.88
VRK3-219ENST00000600137 LINC01551Q86U37 167 aa9.58□□□□□ -0.88
VRK3-219ENST00000600137 LINC00476Q8WZB0 136 aa9.58□□□□□ -0.88
VRK3-219ENST00000600137 RNASE7Q9H1E1 156 aaKnown RBP9.58□□□□□ -0.88
VRK3-219ENST00000600137 DNAH6Q9C0G6 4158 aa9.58□□□□□ -0.88
VRK3-219ENST00000600137 H3BNG1 76 aa9.57□□□□□ -0.88
VRK3-219ENST00000600137 NXPH4O95158 308 aa9.57□□□□□ -0.88
VRK3-219ENST00000600137 OR5AL1P0C617 328 aa9.57□□□□□ -0.88
VRK3-219ENST00000600137 CRYBA4P53673 196 aa9.57□□□□□ -0.88
VRK3-219ENST00000600137 LGALS9CQ6DKI2 356 aa9.57□□□□□ -0.88
VRK3-219ENST00000600137 FAM231DQ6ZW35 169 aa9.57□□□□□ -0.88
VRK3-219ENST00000600137 OR2D3Q8NGH3 330 aa9.57□□□□□ -0.88
VRK3-219ENST00000600137 SAMD10Q9BYL1 202 aa9.57□□□□□ -0.88
VRK3-219ENST00000600137 BIN3Q9NQY0 253 aa9.57□□□□□ -0.88
VRK3-219ENST00000600137 A0A0J9YY99 117 aa9.56□□□□□ -0.88
VRK3-219ENST00000600137 P01737 135 aa9.56□□□□□ -0.88
VRK3-219ENST00000600137 FAM74A3Q4VXF1 159 aa9.56□□□□□ -0.88
VRK3-219ENST00000600137 OR4C5Q8NGB2 326 aa9.56□□□□□ -0.88
VRK3-219ENST00000600137 OR10AG1Q8NH19 301 aa9.56□□□□□ -0.88
VRK3-219ENST00000600137 DAZAP1Q96EP5 407 aaKnown RBP9.56□□□□□ -0.88
VRK3-219ENST00000600137 HHLA3Q9XRX5 114 aa9.56□□□□□ -0.88
VRK3-219ENST00000600137 CRYGDP07320 174 aa9.55□□□□□ -0.88
VRK3-219ENST00000600137 GATA1P15976 413 aaPredicted RBP9.55□□□□□ -0.88
VRK3-219ENST00000600137 RPS20P60866 119 aaKnown RBP9.55□□□□□ -0.88
VRK3-219ENST00000600137 RPL23P62829 140 aaKnown RBP9.55□□□□□ -0.88
VRK3-219ENST00000600137 TMEM241Q24JQ0 296 aa9.55□□□□□ -0.88
VRK3-219ENST00000600137 Q6ZSN1 163 aa9.55□□□□□ -0.88
VRK3-219ENST00000600137 C15orf53Q8NAA6 179 aa9.55□□□□□ -0.88
VRK3-219ENST00000600137 SFRP2Q96HF1 295 aa9.55□□□□□ -0.88
VRK3-219ENST00000600137 PRO0255Q9UI72 69 aa9.55□□□□□ -0.88
VRK3-219ENST00000600137 PHLDA3Q9Y5J5 127 aa9.55□□□□□ -0.88
VRK3-219ENST00000600137 A0A096LPF7 62 aa9.54□□□□□ -0.88
VRK3-219ENST00000600137 MUC21A0A0G2JKD1 596 aa9.54□□□□□ -0.88
VRK3-219ENST00000600137 MUC21A0A140T8X8 626 aa9.54□□□□□ -0.88
VRK3-219ENST00000600137 RPP21Q9H633 154 aaKnown RBP9.54□□□□□ -0.88
VRK3-219ENST00000600137 TRGV4A0A0C4DH28 118 aa9.53□□□□□ -0.88
VRK3-219ENST00000600137 A8MWV9 139 aa9.53□□□□□ -0.88
VRK3-219ENST00000600137 M0R381 172 aa9.53□□□□□ -0.88
VRK3-219ENST00000600137 CIDEAO60543 219 aa9.53□□□□□ -0.88
VRK3-219ENST00000600137 SLAQ13239 276 aa9.53□□□□□ -0.88
VRK3-219ENST00000600137 SOHLH1Q5JUK2 328 aa9.53□□□□□ -0.88
VRK3-219ENST00000600137 ZFP2Q6ZN57 461 aa9.53□□□□□ -0.88
VRK3-219ENST00000600137 ZFP82Q8N141 532 aa9.53□□□□□ -0.88
VRK3-219ENST00000600137 GTSF1Q8WW33 167 aa9.53□□□□□ -0.88
VRK3-219ENST00000600137 ISOC2Q96AB3 205 aa9.53□□□□□ -0.88
VRK3-219ENST00000600137 OSTCQ9NRP0 149 aa9.53□□□□□ -0.88
VRK3-219ENST00000600137 NAT8Q9UHE5 227 aa9.53□□□□□ -0.88
VRK3-219ENST00000600137 KIF25-AS1Q9Y6Z4 181 aa9.53□□□□□ -0.88
VRK3-219ENST00000600137 DNAH2Q9P225 4427 aa9.53□□□□□ -0.88
VRK3-219ENST00000600137 DNAH10Q8IVF4 4471 aa9.52□□□□□ -0.88
VRK3-219ENST00000600137 IGHV3-73A0A0B4J1V6 119 aa9.52□□□□□ -0.89
VRK3-219ENST00000600137 PAX4O43316 350 aa9.52□□□□□ -0.89
VRK3-219ENST00000600137 GATCO43716 136 aaKnown RBP9.52□□□□□ -0.89
VRK3-219ENST00000600137 LY6G6CO95867 125 aa9.52□□□□□ -0.89
VRK3-219ENST00000600137 NUDT3O95989 172 aa9.52□□□□□ -0.89
VRK3-219ENST00000600137 FOXA3P55318 350 aaPredicted RBP9.52□□□□□ -0.89
VRK3-219ENST00000600137 LINC00315P59091 139 aa9.52□□□□□ -0.89
VRK3-219ENST00000600137 LYZL1Q6UWQ5 148 aa9.52□□□□□ -0.89
VRK3-219ENST00000600137 FER1L6-AS1Q8NA97 138 aa9.52□□□□□ -0.89
VRK3-219ENST00000600137 SYT8Q8NBV8 401 aa9.52□□□□□ -0.89
VRK3-219ENST00000600137 MSRB1Q9NZV6 116 aa9.52□□□□□ -0.89
VRK3-219ENST00000600137 Q9UF83 564 aa9.52□□□□□ -0.89
VRK3-219ENST00000600137 LOC100131303A0A0U1RQF7 123 aa9.51□□□□□ -0.89
VRK3-219ENST00000600137 CTRLP40313 264 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms