RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 TREM1Q9NP99 234 aa11.5□□□□□ -0.57
PNKP-210ENST00000597965 IGLV5-52A0A0A0MRZ9 124 aa11.49□□□□□ -0.57
PNKP-210ENST00000597965 IGHV3-38A0A0C4DH36 116 aa11.49□□□□□ -0.57
PNKP-210ENST00000597965 CTXND1A0A1B0GTU2 59 aa11.49□□□□□ -0.57
PNKP-210ENST00000597965 A0A1B0GV50 99 aa11.49□□□□□ -0.57
PNKP-210ENST00000597965 M0R2P5 195 aa11.49□□□□□ -0.57
PNKP-210ENST00000597965 TIRAPP58753 221 aa11.49□□□□□ -0.57
PNKP-210ENST00000597965 PEA15Q15121 130 aa11.49□□□□□ -0.57
PNKP-210ENST00000597965 Q6ZQT7 251 aa11.49□□□□□ -0.57
PNKP-210ENST00000597965 HERC1Q15751 4861 aa11.48□□□□□ -0.57
PNKP-210ENST00000597965 MAP1LC3B2A6NCE7 125 aa11.48□□□□□ -0.57
PNKP-210ENST00000597965 PPT1P50897 306 aa11.48□□□□□ -0.57
PNKP-210ENST00000597965 UBE2L3P68036 154 aaKnown RBP11.48□□□□□ -0.57
PNKP-210ENST00000597965 KHDC3LQ587J8 217 aa11.48□□□□□ -0.57
PNKP-210ENST00000597965 C10orf91Q5T1B1 145 aa11.48□□□□□ -0.57
PNKP-210ENST00000597965 NHLRC2Q8NBF2 726 aa11.48□□□□□ -0.57
PNKP-210ENST00000597965 CMTM2Q8TAZ6 248 aa11.48□□□□□ -0.57
PNKP-210ENST00000597965 RAB24Q969Q5 203 aa11.48□□□□□ -0.57
PNKP-210ENST00000597965 MAP1LC3BQ9GZQ8 125 aa11.48□□□□□ -0.57
PNKP-210ENST00000597965 TRAV8-6A0A0B4J262 113 aa11.47□□□□□ -0.57
PNKP-210ENST00000597965 RBFOX3A6NFN3 312 aa11.47□□□□□ -0.57
PNKP-210ENST00000597965 DIRC3C9JPN6 131 aa11.47□□□□□ -0.57
PNKP-210ENST00000597965 CIDEAO60543 219 aa11.47□□□□□ -0.57
PNKP-210ENST00000597965 PFN1P07737 140 aaKnown RBP11.47□□□□□ -0.57
PNKP-210ENST00000597965 Q6ZSN1 163 aa11.47□□□□□ -0.57
PNKP-210ENST00000597965 KCNS1Q96KK3 526 aa11.47□□□□□ -0.57
PNKP-210ENST00000597965 NAGKQ9UJ70 344 aa11.47□□□□□ -0.57
PNKP-210ENST00000597965 EIF3GO75821 320 aaKnown RBP eCLIP11.46□□□□□ -0.57
PNKP-210ENST00000597965 ADCYAP1P18509 176 aa11.46□□□□□ -0.57
PNKP-210ENST00000597965 CDC34P49427 236 aaPredicted RBP11.46□□□□□ -0.57
PNKP-210ENST00000597965 FGF8P55075 233 aaPredicted RBP11.46□□□□□ -0.57
PNKP-210ENST00000597965 LINC01556Q5JQF7 62 aa11.46□□□□□ -0.57
PNKP-210ENST00000597965 ZNF506Q5JVG8 444 aa11.46□□□□□ -0.57
PNKP-210ENST00000597965 ARL6IP6Q8N6S5 226 aa11.46□□□□□ -0.57
PNKP-210ENST00000597965 EIF5A2Q9GZV4 153 aaKnown RBP11.46□□□□□ -0.57
PNKP-210ENST00000597965 SMDT1Q9H4I9 107 aa11.46□□□□□ -0.57
PNKP-210ENST00000597965 TRAV21A0A0B4J279 112 aa11.45□□□□□ -0.58
PNKP-210ENST00000597965 SMR3BP02814 79 aaPredicted RBP11.45□□□□□ -0.58
PNKP-210ENST00000597965 SDF2L1Q9HCN8 221 aa11.45□□□□□ -0.58
PNKP-210ENST00000597965 OTORQ9NRC9 128 aa11.45□□□□□ -0.58
PNKP-210ENST00000597965 CARHSP1Q9Y2V2 147 aaKnown RBP11.45□□□□□ -0.58
PNKP-210ENST00000597965 FAT1Q14517 4588 aa11.45□□□□□ -0.58
PNKP-210ENST00000597965 A0A1W2PPV4 95 aa11.44□□□□□ -0.58
PNKP-210ENST00000597965 IBA57-AS1B1ANH7 110 aa11.44□□□□□ -0.58
PNKP-210ENST00000597965 HMGB3O15347 200 aaKnown RBP11.44□□□□□ -0.58
PNKP-210ENST00000597965 PRADC1Q9BSG0 188 aa11.44□□□□□ -0.58
PNKP-210ENST00000597965 SEC11CQ9BY50 192 aa11.44□□□□□ -0.58
PNKP-210ENST00000597965 GNG13Q9P2W3 67 aa11.44□□□□□ -0.58
PNKP-210ENST00000597965 F8W036 122 aa11.43□□□□□ -0.58
PNKP-210ENST00000597965 SRP19P09132 144 aaKnown RBP11.43□□□□□ -0.58
PNKP-210ENST00000597965 Q8N814 137 aa11.43□□□□□ -0.58
PNKP-210ENST00000597965 IGHV3-16A0A0C4DH30 117 aa11.42□□□□□ -0.58
PNKP-210ENST00000597965 LRCOL1A6NCL2 159 aa11.42□□□□□ -0.58
PNKP-210ENST00000597965 FBLL1A6NHQ2 334 aaKnown RBP11.42□□□□□ -0.58
PNKP-210ENST00000597965 APOC3P02656 99 aa11.42□□□□□ -0.58
PNKP-210ENST00000597965 STAG3L2P0CL84 134 aa11.42□□□□□ -0.58
PNKP-210ENST00000597965 STAG3L3P0CL85 134 aa11.42□□□□□ -0.58
PNKP-210ENST00000597965 BCL2P10415 239 aa11.42□□□□□ -0.58
PNKP-210ENST00000597965 GATA1P15976 413 aaPredicted RBP11.42□□□□□ -0.58
PNKP-210ENST00000597965 OR10J3Q5JRS4 329 aa11.42□□□□□ -0.58
PNKP-210ENST00000597965 TM2D2Q9BX73 214 aa11.42□□□□□ -0.58
PNKP-210ENST00000597965 TRBV6-4A0A1B0GX49 114 aa11.41□□□□□ -0.58
PNKP-210ENST00000597965 PGPA6NDG6 321 aa11.41□□□□□ -0.58
PNKP-210ENST00000597965 GNRH2O43555 120 aa11.41□□□□□ -0.58
PNKP-210ENST00000597965 IFNA1P01562 189 aa11.41□□□□□ -0.58
PNKP-210ENST00000597965 LAGE3Q14657 143 aa11.41□□□□□ -0.58
PNKP-210ENST00000597965 RHOHQ15669 191 aa11.41□□□□□ -0.58
PNKP-210ENST00000597965 PQLC2Q6ZP29 291 aa11.41□□□□□ -0.58
PNKP-210ENST00000597965 NDFIP1Q9BT67 221 aa11.41□□□□□ -0.58
PNKP-210ENST00000597965 VAX2Q9UIW0 290 aa11.41□□□□□ -0.58
PNKP-210ENST00000597965 SRRM2Q9UQ35 2752 aaKnown RBP11.4□□□□□ -0.58
PNKP-210ENST00000597965 SERTM2A0A1B0GWG4 89 aa11.4□□□□□ -0.58
PNKP-210ENST00000597965 J3QL48 77 aa11.4□□□□□ -0.58
PNKP-210ENST00000597965 CXorf1O96002 111 aa11.4□□□□□ -0.58
PNKP-210ENST00000597965 TYMSP04818 313 aa11.4□□□□□ -0.58
PNKP-210ENST00000597965 ZNF876PQ49A33 203 aa11.4□□□□□ -0.58
PNKP-210ENST00000597965 RPH3ALQ9UNE2 315 aa11.4□□□□□ -0.58
PNKP-210ENST00000597965 FLG2Q5D862 2391 aaPredicted RBP11.4□□□□□ -0.58
PNKP-210ENST00000597965 NDUFS6O75380 124 aaKnown RBP11.39□□□□□ -0.59
PNKP-210ENST00000597965 SCO1O75880 301 aa11.39□□□□□ -0.59
PNKP-210ENST00000597965 PLA2G1BP04054 148 aaKnown RBP11.39□□□□□ -0.59
PNKP-210ENST00000597965 TAGLN2P37802 199 aaKnown RBP11.39□□□□□ -0.59
PNKP-210ENST00000597965 LELP1Q5T871 98 aa11.39□□□□□ -0.59
PNKP-210ENST00000597965 ATRAIDQ6UW56 229 aa11.39□□□□□ -0.59
PNKP-210ENST00000597965 GOLT1AQ6ZVE7 132 aa11.39□□□□□ -0.59
PNKP-210ENST00000597965 SLC25A29Q8N8R3 303 aa11.39□□□□□ -0.59
PNKP-210ENST00000597965 Q9HAA7 133 aa11.39□□□□□ -0.59
PNKP-210ENST00000597965 MANBALQ9NQG1 85 aa11.39□□□□□ -0.59
PNKP-210ENST00000597965 LOC100131303A0A0U1RQF7 123 aa11.38□□□□□ -0.59
PNKP-210ENST00000597965 K7EQM0 130 aa11.38□□□□□ -0.59
PNKP-210ENST00000597965 ARL14EPLP0DKL9 152 aa11.38□□□□□ -0.59
PNKP-210ENST00000597965 MGST1P10620 155 aaKnown RBP11.38□□□□□ -0.59
PNKP-210ENST00000597965 GCHFRP30047 84 aa11.38□□□□□ -0.59
PNKP-210ENST00000597965 SVBPQ8N300 66 aa11.37□□□□□ -0.59
PNKP-210ENST00000597965 GTSF1LQ9H1H1 148 aa11.37□□□□□ -0.59
PNKP-210ENST00000597965 MYCBP2O75592 4640 aa11.36□□□□□ -0.59
PNKP-210ENST00000597965 TRAV8-3A0A0A6YYJ7 113 aa11.36□□□□□ -0.59
PNKP-210ENST00000597965 F6UZH7 168 aa11.36□□□□□ -0.59
PNKP-210ENST00000597965 PAGE4O60829 102 aa11.36□□□□□ -0.59
PNKP-210ENST00000597965 CFAP126Q5VTH2 177 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms