RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 GATCO43716 136 aaKnown RBP9.01□□□□□ -0.97
IRF3-218ENST00000597369 IGKV2D-40P01614 121 aaPredicted RBP9.01□□□□□ -0.97
IRF3-218ENST00000597369 CXCL1P09341 107 aa9.01□□□□□ -0.97
IRF3-218ENST00000597369 ZNF705DP0CH99 300 aaPredicted RBP9.01□□□□□ -0.97
IRF3-218ENST00000597369 ZNF705BP0CI00 300 aaPredicted RBP9.01□□□□□ -0.97
IRF3-218ENST00000597369 FUSP35637 526 aaKnown RBP eCLIP9.01□□□□□ -0.97
IRF3-218ENST00000597369 IGFL4Q6B9Z1 124 aa9.01□□□□□ -0.97
IRF3-218ENST00000597369 PRR27Q6MZM9 219 aa9.01□□□□□ -0.97
IRF3-218ENST00000597369 RNF182Q8N6D2 247 aa9.01□□□□□ -0.97
IRF3-218ENST00000597369 RNASE7Q9H1E1 156 aaKnown RBP9.01□□□□□ -0.97
IRF3-218ENST00000597369 ZNF492Q9P255 531 aa9.01□□□□□ -0.97
IRF3-218ENST00000597369 V9GYV3 84 aa9.01□□□□□ -0.97
IRF3-218ENST00000597369 TRAV9-1A0A075B6T8 112 aa9□□□□□ -0.97
IRF3-218ENST00000597369 KNCNA6PVL3 124 aa9□□□□□ -0.97
IRF3-218ENST00000597369 ZNF705GA8MUZ8 300 aaPredicted RBP9□□□□□ -0.97
IRF3-218ENST00000597369 OXTP01178 125 aa9□□□□□ -0.97
IRF3-218ENST00000597369 NUTF2P61970 127 aaKnown RBP9□□□□□ -0.97
IRF3-218ENST00000597369 SAPCD1Q5SSQ6 148 aa9□□□□□ -0.97
IRF3-218ENST00000597369 DAZAP1Q96EP5 407 aaKnown RBP9□□□□□ -0.97
IRF3-218ENST00000597369 PYGO2Q9BRQ0 406 aa9□□□□□ -0.97
IRF3-218ENST00000597369 NDFIP1Q9BT67 221 aa9□□□□□ -0.97
IRF3-218ENST00000597369 SOCS3O14543 225 aa8.99□□□□□ -0.97
IRF3-218ENST00000597369 CT45A10P0DMU9 189 aa8.99□□□□□ -0.97
IRF3-218ENST00000597369 ID1P41134 155 aa8.99□□□□□ -0.97
IRF3-218ENST00000597369 RPS10P46783 165 aaKnown RBP8.99□□□□□ -0.97
IRF3-218ENST00000597369 ACTL10Q5JWF8 245 aa8.99□□□□□ -0.97
IRF3-218ENST00000597369 Q6ZRN7 208 aaPredicted RBP8.99□□□□□ -0.97
IRF3-218ENST00000597369 ZNF738Q8NE65 137 aa8.99□□□□□ -0.97
IRF3-218ENST00000597369 NUDT10Q8NFP7 164 aa8.99□□□□□ -0.97
IRF3-218ENST00000597369 NUDT11Q96G61 164 aa8.99□□□□□ -0.97
IRF3-218ENST00000597369 C19orf71A6NCJ1 209 aa8.98□□□□□ -0.97
IRF3-218ENST00000597369 C1orf196B1AJZ1 125 aa8.98□□□□□ -0.97
IRF3-218ENST00000597369 PRAC2D3DTV9 90 aa8.98□□□□□ -0.97
IRF3-218ENST00000597369 K7EQG2 157 aa8.98□□□□□ -0.97
IRF3-218ENST00000597369 P01737 135 aa8.98□□□□□ -0.97
IRF3-218ENST00000597369 PLA2G1BP04054 148 aaKnown RBP8.98□□□□□ -0.97
IRF3-218ENST00000597369 RAB5BP61020 215 aa8.98□□□□□ -0.97
IRF3-218ENST00000597369 CT83Q5H943 113 aa8.98□□□□□ -0.97
IRF3-218ENST00000597369 VGLL1Q99990 258 aa8.98□□□□□ -0.97
IRF3-218ENST00000597369 KRTAP9-2Q9BYQ4 174 aa8.98□□□□□ -0.97
IRF3-218ENST00000597369 XCL2Q9UBD3 114 aa8.98□□□□□ -0.97
IRF3-218ENST00000597369 PRB4P10163 310 aaPredicted RBP8.97□□□□□ -0.97
IRF3-218ENST00000597369 RPL19P84098 196 aaKnown RBP8.97□□□□□ -0.97
IRF3-218ENST00000597369 TMEM78Q5T7P6 136 aa8.97□□□□□ -0.97
IRF3-218ENST00000597369 COX8CQ7Z4L0 72 aa8.97□□□□□ -0.97
IRF3-218ENST00000597369 OR4B1Q8NGF8 309 aa8.97□□□□□ -0.97
IRF3-218ENST00000597369 ZC2HC1AQ96GY0 325 aa8.97□□□□□ -0.97
IRF3-218ENST00000597369 C20orf173Q96LM9 149 aa8.97□□□□□ -0.97
IRF3-218ENST00000597369 RPP21Q9H633 154 aaKnown RBP8.97□□□□□ -0.97
IRF3-218ENST00000597369 SMIM27A0A1W2PRY6 76 aa8.96□□□□□ -0.98
IRF3-218ENST00000597369 NUDT3O95989 172 aa8.96□□□□□ -0.98
IRF3-218ENST00000597369 TYMSP04818 313 aa8.96□□□□□ -0.98
IRF3-218ENST00000597369 ZNF138P52744 262 aa8.96□□□□□ -0.98
IRF3-218ENST00000597369 DAD1P61803 113 aa8.96□□□□□ -0.98
IRF3-218ENST00000597369 ERCC8Q13216 396 aa8.96□□□□□ -0.98
IRF3-218ENST00000597369 OR10J6PQ8NGY7 276 aa8.96□□□□□ -0.98
IRF3-218ENST00000597369 TSKUQ8WUA8 353 aa8.96□□□□□ -0.98
IRF3-218ENST00000597369 ZNF688P0C7X2 276 aa8.95□□□□□ -0.98
IRF3-218ENST00000597369 GCSHP23434 173 aa8.95□□□□□ -0.98
IRF3-218ENST00000597369 SMUG1Q53HV7 270 aa8.95□□□□□ -0.98
IRF3-218ENST00000597369 FAM162BQ5T6X4 162 aa8.95□□□□□ -0.98
IRF3-218ENST00000597369 C9orf47Q6ZRZ4 202 aa8.95□□□□□ -0.98
IRF3-218ENST00000597369 Q8TAT8 98 aa8.95□□□□□ -0.98
IRF3-218ENST00000597369 DCANP1Q8TF63 244 aa8.95□□□□□ -0.98
IRF3-218ENST00000597369 C8orf49Q96NF6 230 aa8.95□□□□□ -0.98
IRF3-218ENST00000597369 TMEM70Q9BUB7 260 aa8.95□□□□□ -0.98
IRF3-218ENST00000597369 AGPAT4-IT1Q9H0P7 198 aa8.95□□□□□ -0.98
IRF3-218ENST00000597369 PPP1R14DQ9NXH3 145 aa8.95□□□□□ -0.98
IRF3-218ENST00000597369 A8MWL6 223 aa8.94□□□□□ -0.98
IRF3-218ENST00000597369 NPIPB6E9PJ23 425 aa8.94□□□□□ -0.98
IRF3-218ENST00000597369 TCL1AP56279 114 aa8.94□□□□□ -0.98
IRF3-218ENST00000597369 SNRPD3P62318 126 aaKnown RBP8.94□□□□□ -0.98
IRF3-218ENST00000597369 HAMPP81172 84 aa8.94□□□□□ -0.98
IRF3-218ENST00000597369 LINC00477Q96M19 166 aa8.94□□□□□ -0.98
IRF3-218ENST00000597369 UPK3BQ9BT76 320 aa8.94□□□□□ -0.98
IRF3-218ENST00000597369 GFRA4Q9GZZ7 299 aa8.94□□□□□ -0.98
IRF3-218ENST00000597369 NAT8BQ9UHF3 227 aa8.94□□□□□ -0.98
IRF3-218ENST00000597369 LENEPQ9Y5L5 61 aa8.94□□□□□ -0.98
IRF3-218ENST00000597369 KRTAP9-6A0A140TA67 174 aa8.93□□□□□ -0.98
IRF3-218ENST00000597369 CRIP1P50238 77 aa8.93□□□□□ -0.98
IRF3-218ENST00000597369 LINC00315P59091 139 aa8.93□□□□□ -0.98
IRF3-218ENST00000597369 ZFP82Q8N141 532 aa8.93□□□□□ -0.98
IRF3-218ENST00000597369 OR8A1Q8NGG7 326 aa8.93□□□□□ -0.98
IRF3-218ENST00000597369 OR2D3Q8NGH3 330 aa8.93□□□□□ -0.98
IRF3-218ENST00000597369 TNXBP22105 4242 aa8.93□□□□□ -0.98
IRF3-218ENST00000597369 XKRY2A2RUG3 117 aa8.92□□□□□ -0.98
IRF3-218ENST00000597369 FAM231BA6NCW3 169 aa8.92□□□□□ -0.98
IRF3-218ENST00000597369 SH2D1AO60880 128 aa8.92□□□□□ -0.98
IRF3-218ENST00000597369 TRGC2P03986 189 aa8.92□□□□□ -0.98
IRF3-218ENST00000597369 RPS20P60866 119 aaKnown RBP8.92□□□□□ -0.98
IRF3-218ENST00000597369 HIST1H1AQ02539 215 aaPredicted RBP8.92□□□□□ -0.98
IRF3-218ENST00000597369 COX19Q49B96 90 aa8.92□□□□□ -0.98
IRF3-218ENST00000597369 HIGD1CA8MV81 97 aa8.91□□□□□ -0.98
IRF3-218ENST00000597369 H3BMM0 161 aa8.91□□□□□ -0.98
IRF3-218ENST00000597369 PSMG4Q5JS54 123 aa8.91□□□□□ -0.98
IRF3-218ENST00000597369 WDR73Q6P4I2 378 aa8.91□□□□□ -0.98
IRF3-218ENST00000597369 NUP35Q8NFH5 326 aa8.91□□□□□ -0.98
IRF3-218ENST00000597369 SAV1Q9H4B6 383 aaPredicted RBP8.91□□□□□ -0.98
IRF3-218ENST00000597369 IGHV3OR16-12A0A075B7B8 117 aa8.9□□□□□ -0.98
IRF3-218ENST00000597369 TRBV7-9A0A0J9YWB2 115 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms