RNA–Protein interactions for RNA: ENST00000596765.5

IRF3-213, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-213ENST00000596765 HIST1H2BKO60814 126 aa9.7□□□□□ -0.86
IRF3-213ENST00000596765 HIST1H2BJP06899 126 aa9.7□□□□□ -0.86
IRF3-213ENST00000596765 OR5AL1P0C617 328 aa9.7□□□□□ -0.86
IRF3-213ENST00000596765 HIST1H2BOP23527 126 aa9.7□□□□□ -0.86
IRF3-213ENST00000596765 HIST1H2BBP33778 126 aa9.7□□□□□ -0.86
IRF3-213ENST00000596765 HIST1H2BDP58876 126 aa9.7□□□□□ -0.86
IRF3-213ENST00000596765 HIST1H2BCP62807 126 aa9.7□□□□□ -0.86
IRF3-213ENST00000596765 HIST2H2BEQ16778 126 aa9.7□□□□□ -0.86
IRF3-213ENST00000596765 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.7□□□□□ -0.86
IRF3-213ENST00000596765 SPANXN1Q5VSR9 72 aa9.7□□□□□ -0.86
IRF3-213ENST00000596765 HIST1H2BHQ93079 126 aa9.7□□□□□ -0.86
IRF3-213ENST00000596765 HIST1H2BNQ99877 126 aa9.7□□□□□ -0.86
IRF3-213ENST00000596765 HIST1H2BMQ99879 126 aa9.7□□□□□ -0.86
IRF3-213ENST00000596765 C11orf21Q9P2W6 132 aa9.7□□□□□ -0.86
IRF3-213ENST00000596765 PHLDA3Q9Y5J5 127 aa9.7□□□□□ -0.86
IRF3-213ENST00000596765 IGHV1OR15-1A0A075B7D0 117 aa9.69□□□□□ -0.86
IRF3-213ENST00000596765 H3BVH4 76 aa9.69□□□□□ -0.86
IRF3-213ENST00000596765 NDUFA6P56556 154 aa9.69□□□□□ -0.86
IRF3-213ENST00000596765 C1QTNF4Q9BXJ3 329 aa9.69□□□□□ -0.86
IRF3-213ENST00000596765 TIMM8BQ9Y5J9 83 aaPredicted RBP9.69□□□□□ -0.86
IRF3-213ENST00000596765 DYNC2H1Q8NCM8 4307 aaKnown RBP9.68□□□□□ -0.86
IRF3-213ENST00000596765 STARD9Q9P2P6 4700 aa9.68□□□□□ -0.86
IRF3-213ENST00000596765 ZNF324O75467 553 aaPredicted RBP9.68□□□□□ -0.86
IRF3-213ENST00000596765 FXYD7P58549 80 aa9.68□□□□□ -0.86
IRF3-213ENST00000596765 SSTP61278 116 aa9.68□□□□□ -0.86
IRF3-213ENST00000596765 TDRG1Q3Y452 100 aa9.68□□□□□ -0.86
IRF3-213ENST00000596765 DNLZQ5SXM8 178 aa9.68□□□□□ -0.86
IRF3-213ENST00000596765 MORN3Q6PF18 240 aaPredicted RBP9.68□□□□□ -0.86
IRF3-213ENST00000596765 TRPT1Q86TN4 253 aaKnown RBP9.68□□□□□ -0.86
IRF3-213ENST00000596765 TMEM208Q9BTX3 173 aa9.68□□□□□ -0.86
IRF3-213ENST00000596765 CNFNQ9BYD5 112 aa9.68□□□□□ -0.86
IRF3-213ENST00000596765 CBY3A6NI87 242 aa9.67□□□□□ -0.86
IRF3-213ENST00000596765 SNAI2O43623 268 aa9.67□□□□□ -0.86
IRF3-213ENST00000596765 NTF3P20783 257 aa9.67□□□□□ -0.86
IRF3-213ENST00000596765 KIR3DS1Q14943 382 aa9.67□□□□□ -0.86
IRF3-213ENST00000596765 TMEM256Q8N2U0 113 aa9.67□□□□□ -0.86
IRF3-213ENST00000596765 GATD1Q8NB37 220 aa9.67□□□□□ -0.86
IRF3-213ENST00000596765 SYT8Q8NBV8 401 aa9.67□□□□□ -0.86
IRF3-213ENST00000596765 SSBP4Q9BWG4 385 aaPredicted RBP9.67□□□□□ -0.86
IRF3-213ENST00000596765 PHOX2AO14813 284 aa9.66□□□□□ -0.86
IRF3-213ENST00000596765 ZNF493Q6ZR52 646 aa9.66□□□□□ -0.86
IRF3-213ENST00000596765 LINC01587Q99440 93 aa9.66□□□□□ -0.86
IRF3-213ENST00000596765 TMEM191AQ9H0A3 160 aa9.66□□□□□ -0.86
IRF3-213ENST00000596765 EDA2RQ9HAV5 297 aa9.66□□□□□ -0.86
IRF3-213ENST00000596765 IGHV4-4A0A075B6R2 117 aa9.65□□□□□ -0.86
IRF3-213ENST00000596765 MUC21A0A0G2JKD1 596 aa9.65□□□□□ -0.86
IRF3-213ENST00000596765 MUC21A0A140T8X8 626 aa9.65□□□□□ -0.86
IRF3-213ENST00000596765 GNRH2O43555 120 aa9.65□□□□□ -0.86
IRF3-213ENST00000596765 S100A2P29034 98 aa9.65□□□□□ -0.86
IRF3-213ENST00000596765 SNRPEP62304 92 aaKnown RBP9.65□□□□□ -0.86
IRF3-213ENST00000596765 SLAQ13239 276 aa9.65□□□□□ -0.86
IRF3-213ENST00000596765 KIAA1644Q3SXP7 199 aa9.65□□□□□ -0.86
IRF3-213ENST00000596765 Q6ZQT7 251 aa9.65□□□□□ -0.86
IRF3-213ENST00000596765 BAGE3Q86Y29 109 aa9.65□□□□□ -0.86
IRF3-213ENST00000596765 OR10AG1Q8NH19 301 aa9.65□□□□□ -0.86
IRF3-213ENST00000596765 SPATA25Q9BR10 227 aa9.65□□□□□ -0.86
IRF3-213ENST00000596765 ZMAT4Q9H898 229 aa9.65□□□□□ -0.86
IRF3-213ENST00000596765 GOLT1BQ9Y3E0 138 aa9.65□□□□□ -0.86
IRF3-213ENST00000596765 LOC102724200A0A096LPH7 203 aaPredicted RBP9.64□□□□□ -0.87
IRF3-213ENST00000596765 C3orf84H3BNL1 204 aa9.64□□□□□ -0.87
IRF3-213ENST00000596765 M0R381 172 aa9.64□□□□□ -0.87
IRF3-213ENST00000596765 SMIM17P0DL12 118 aa9.64□□□□□ -0.87
IRF3-213ENST00000596765 RPL35AP18077 110 aaKnown RBP9.64□□□□□ -0.87
IRF3-213ENST00000596765 SRIP30626 198 aa9.64□□□□□ -0.87
IRF3-213ENST00000596765 ZNF415Q09FC8 603 aa9.64□□□□□ -0.87
IRF3-213ENST00000596765 OR10J3Q5JRS4 329 aa9.64□□□□□ -0.87
IRF3-213ENST00000596765 AP1S3Q96PC3 154 aa9.64□□□□□ -0.87
IRF3-213ENST00000596765 OVOL2Q9BRP0 275 aa9.64□□□□□ -0.87
IRF3-213ENST00000596765 LINC00467Q9BRT7 94 aa9.64□□□□□ -0.87
IRF3-213ENST00000596765 XCL2Q9UBD3 114 aa9.64□□□□□ -0.87
IRF3-213ENST00000596765 C5orf52A6NGY3 159 aa9.63□□□□□ -0.87
IRF3-213ENST00000596765 CRXO43186 299 aaPredicted RBP9.63□□□□□ -0.87
IRF3-213ENST00000596765 HTN1P15515 57 aa9.63□□□□□ -0.87
IRF3-213ENST00000596765 Q0VG73 95 aa9.63□□□□□ -0.87
IRF3-213ENST00000596765 FAM104BQ5XKR9 115 aa9.63□□□□□ -0.87
IRF3-213ENST00000596765 SCRT2Q9NQ03 307 aa9.63□□□□□ -0.87
IRF3-213ENST00000596765 SACSQ9NZJ4 4579 aa9.63□□□□□ -0.87
IRF3-213ENST00000596765 IGHV3-16A0A0C4DH30 117 aa9.62□□□□□ -0.87
IRF3-213ENST00000596765 PPBPP02775 128 aa9.62□□□□□ -0.87
IRF3-213ENST00000596765 GIG44P09565 113 aaPredicted RBP9.62□□□□□ -0.87
IRF3-213ENST00000596765 RNASE3P12724 160 aaKnown RBP9.62□□□□□ -0.87
IRF3-213ENST00000596765 ZNF575Q86XF7 245 aa9.62□□□□□ -0.87
IRF3-213ENST00000596765 UBE2CO00762 179 aa9.61□□□□□ -0.87
IRF3-213ENST00000596765 HOXA5P20719 270 aa9.61□□□□□ -0.87
IRF3-213ENST00000596765 CKS2P33552 79 aa9.61□□□□□ -0.87
IRF3-213ENST00000596765 COA6Q5JTJ3 125 aaKnown RBP9.61□□□□□ -0.87
IRF3-213ENST00000596765 AMN1Q8IY45 258 aa9.61□□□□□ -0.87
IRF3-213ENST00000596765 ORMDL3Q8N138 153 aa9.61□□□□□ -0.87
IRF3-213ENST00000596765 ALKBH7Q9BT30 221 aaPredicted RBP9.61□□□□□ -0.87
IRF3-213ENST00000596765 LYSTQ99698 3801 aa9.61□□□□□ -0.87
IRF3-213ENST00000596765 IGHV3OR16-12A0A075B7B8 117 aa9.6□□□□□ -0.87
IRF3-213ENST00000596765 LOC105371267A0A1B0GV96 52 aa9.6□□□□□ -0.87
IRF3-213ENST00000596765 DEFB135Q30KP9 77 aa9.6□□□□□ -0.87
IRF3-213ENST00000596765 DMRTA1Q5VZB9 504 aa9.6□□□□□ -0.87
IRF3-213ENST00000596765 C9orf85Q96MD7 179 aa9.6□□□□□ -0.87
IRF3-213ENST00000596765 SPXQ9BT56 116 aa9.6□□□□□ -0.87
IRF3-213ENST00000596765 CSTL1Q9H114 145 aa9.6□□□□□ -0.87
IRF3-213ENST00000596765 DPH3P1Q9H4G8 78 aa9.6□□□□□ -0.87
IRF3-213ENST00000596765 MSRB1Q9NZV6 116 aa9.6□□□□□ -0.87
IRF3-213ENST00000596765 DNAH1Q9P2D7 4330 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms