RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 LY6HO94772 140 aa6.56□□□□□ -1.36
SIN3B-208ENST00000596638 ERCC8Q13216 396 aa6.56□□□□□ -1.36
SIN3B-208ENST00000596638 C12orf74Q32Q52 190 aa6.56□□□□□ -1.36
SIN3B-208ENST00000596638 TMEM78Q5T7P6 136 aa6.56□□□□□ -1.36
SIN3B-208ENST00000596638 GTSCR1Q86UQ5 136 aa6.56□□□□□ -1.36
SIN3B-208ENST00000596638 EEF1AKMT3Q96AZ1 226 aa6.56□□□□□ -1.36
SIN3B-208ENST00000596638 MRPL35Q9NZE8 188 aaKnown RBP6.56□□□□□ -1.36
SIN3B-208ENST00000596638 C11orf21Q9P2W6 132 aa6.56□□□□□ -1.36
SIN3B-208ENST00000596638 JMJD1CQ15652 2540 aa6.56□□□□□ -1.36
SIN3B-208ENST00000596638 CR1P17927 2039 aa6.55□□□□□ -1.36
SIN3B-208ENST00000596638 STAB1Q9NY15 2570 aa6.55□□□□□ -1.36
SIN3B-208ENST00000596638 TRBV7-9A0A0J9YWB2 115 aa6.55□□□□□ -1.36
SIN3B-208ENST00000596638 F8VRH5 84 aa6.55□□□□□ -1.36
SIN3B-208ENST00000596638 GAS8-AS1O95177 125 aa6.55□□□□□ -1.36
SIN3B-208ENST00000596638 PPP1R17O96001 155 aa6.55□□□□□ -1.36
SIN3B-208ENST00000596638 GATA1P15976 413 aaPredicted RBP6.55□□□□□ -1.36
SIN3B-208ENST00000596638 RPL32P62910 135 aaKnown RBP6.55□□□□□ -1.36
SIN3B-208ENST00000596638 KLRD1Q13241 179 aa6.55□□□□□ -1.36
SIN3B-208ENST00000596638 POM121L12Q8N7R1 296 aa6.55□□□□□ -1.36
SIN3B-208ENST00000596638 MAPKAPK5-AS1Q8N8E1 139 aa6.55□□□□□ -1.36
SIN3B-208ENST00000596638 LINC00477Q96M19 166 aa6.55□□□□□ -1.36
SIN3B-208ENST00000596638 METTL26Q96S19 204 aa6.55□□□□□ -1.36
SIN3B-208ENST00000596638 SMIM2Q9BVW6 85 aa6.55□□□□□ -1.36
SIN3B-208ENST00000596638 SIRPDQ9H106 197 aa6.55□□□□□ -1.36
SIN3B-208ENST00000596638 ABCA1O95477 2261 aa6.55□□□□□ -1.36
SIN3B-208ENST00000596638 HIVEP2P31629 2446 aa6.55□□□□□ -1.36
SIN3B-208ENST00000596638 NSD1Q96L73 2696 aaPredicted RBP6.54□□□□□ -1.36
SIN3B-208ENST00000596638 TLN2Q9Y4G6 2542 aa6.54□□□□□ -1.36
SIN3B-208ENST00000596638 TRAV40A0A0B4J280 105 aa6.54□□□□□ -1.36
SIN3B-208ENST00000596638 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.54□□□□□ -1.36
SIN3B-208ENST00000596638 OVOL1O14753 267 aa6.54□□□□□ -1.36
SIN3B-208ENST00000596638 CIDEAO60543 219 aa6.54□□□□□ -1.36
SIN3B-208ENST00000596638 BRI3O95415 125 aa6.54□□□□□ -1.36
SIN3B-208ENST00000596638 IGHV3-23P01764 117 aa6.54□□□□□ -1.36
SIN3B-208ENST00000596638 CLEC3BP05452 202 aa6.54□□□□□ -1.36
SIN3B-208ENST00000596638 UBE2E1P51965 193 aa6.54□□□□□ -1.36
SIN3B-208ENST00000596638 CRIP2P52943 208 aaPredicted RBP6.54□□□□□ -1.36
SIN3B-208ENST00000596638 RRN3P1Q2M238 152 aa6.54□□□□□ -1.36
SIN3B-208ENST00000596638 C15orf32Q32M92 178 aa6.54□□□□□ -1.36
SIN3B-208ENST00000596638 CD300EQ496F6 205 aaPredicted RBP6.54□□□□□ -1.36
SIN3B-208ENST00000596638 IGFL4Q6B9Z1 124 aa6.54□□□□□ -1.36
SIN3B-208ENST00000596638 C9orf139Q6ZV77 190 aa6.54□□□□□ -1.36
SIN3B-208ENST00000596638 WFDC3Q8IUB2 231 aa6.54□□□□□ -1.36
SIN3B-208ENST00000596638 TOMM6Q96B49 74 aa6.54□□□□□ -1.36
SIN3B-208ENST00000596638 ZNF479Q96JC4 524 aa6.54□□□□□ -1.36
SIN3B-208ENST00000596638 NAA38Q9BRA0 125 aaKnown RBP6.54□□□□□ -1.36
SIN3B-208ENST00000596638 YAE1D1Q9NRH1 226 aa6.54□□□□□ -1.36
SIN3B-208ENST00000596638 SPANXB1Q9NS25 103 aaPredicted RBP6.54□□□□□ -1.36
SIN3B-208ENST00000596638 TMEM160Q9NX00 188 aa6.54□□□□□ -1.36
SIN3B-208ENST00000596638 NHP2Q9NX24 153 aaKnown RBP6.54□□□□□ -1.36
SIN3B-208ENST00000596638 MYMXA0A1B0GTQ4 84 aa6.53□□□□□ -1.36
SIN3B-208ENST00000596638 TRGV3P03979 118 aa6.53□□□□□ -1.36
SIN3B-208ENST00000596638 C8orf86Q6ZUL3 223 aa6.53□□□□□ -1.36
SIN3B-208ENST00000596638 APRG1Q8IVJ8 170 aa6.53□□□□□ -1.36
SIN3B-208ENST00000596638 NEXN-AS1Q8NBZ9 246 aa6.53□□□□□ -1.36
SIN3B-208ENST00000596638 ATP6V0E2Q8NHE4 81 aa6.53□□□□□ -1.36
SIN3B-208ENST00000596638 SPATA3Q8NHX4 192 aa6.53□□□□□ -1.36
SIN3B-208ENST00000596638 AJUBAQ96IF1 538 aa6.53□□□□□ -1.36
SIN3B-208ENST00000596638 CCDC140Q96MF4 163 aa6.53□□□□□ -1.36
SIN3B-208ENST00000596638 SIGMAR1Q99720 223 aa6.53□□□□□ -1.36
SIN3B-208ENST00000596638 SPATA25Q9BR10 227 aa6.53□□□□□ -1.36
SIN3B-208ENST00000596638 SONP18583 2426 aaKnown RBP6.52□□□□□ -1.36
SIN3B-208ENST00000596638 TRAV21A0A0B4J279 112 aa6.52□□□□□ -1.37
SIN3B-208ENST00000596638 TEX48A0A1B0GUV7 120 aa6.52□□□□□ -1.37
SIN3B-208ENST00000596638 FAM223BA6NKX1 122 aa6.52□□□□□ -1.37
SIN3B-208ENST00000596638 OR11H12B2RN74 326 aa6.52□□□□□ -1.37
SIN3B-208ENST00000596638 RPL24P83731 157 aaKnown RBP6.52□□□□□ -1.37
SIN3B-208ENST00000596638 PAPPA-AS1Q5QFB9 102 aa6.52□□□□□ -1.37
SIN3B-208ENST00000596638 SPANXN1Q5VSR9 72 aa6.52□□□□□ -1.37
SIN3B-208ENST00000596638 SAMD13Q5VXD3 122 aa6.52□□□□□ -1.37
SIN3B-208ENST00000596638 LCNL1Q6ZST4 164 aa6.52□□□□□ -1.37
SIN3B-208ENST00000596638 FAM223AQ8IWN6 122 aa6.52□□□□□ -1.37
SIN3B-208ENST00000596638 OR11H1Q8NG94 326 aa6.52□□□□□ -1.37
SIN3B-208ENST00000596638 OR11H2Q8NH07 326 aa6.52□□□□□ -1.37
SIN3B-208ENST00000596638 C10orf105Q8TEF2 133 aa6.52□□□□□ -1.37
SIN3B-208ENST00000596638 GLMPQ8WWB7 406 aa6.52□□□□□ -1.37
SIN3B-208ENST00000596638 DPH3P1Q9H4G8 78 aa6.52□□□□□ -1.37
SIN3B-208ENST00000596638 PRO0461Q9UI25 63 aa6.52□□□□□ -1.37
SIN3B-208ENST00000596638 COL6A5A8TX70 2615 aa6.51□□□□□ -1.37
SIN3B-208ENST00000596638 IGHV1-69DA0A0B4J2H0 117 aa6.51□□□□□ -1.37
SIN3B-208ENST00000596638 TMEM238LA0A1B0GVL6 79 aa6.51□□□□□ -1.37
SIN3B-208ENST00000596638 A6NJY4 79 aa6.51□□□□□ -1.37
SIN3B-208ENST00000596638 K7ERJ3 54 aa6.51□□□□□ -1.37
SIN3B-208ENST00000596638 NDUFS8O00217 210 aa6.51□□□□□ -1.37
SIN3B-208ENST00000596638 HOXA3O43365 443 aaPredicted RBP6.51□□□□□ -1.37
SIN3B-208ENST00000596638 NXPH4O95158 308 aa6.51□□□□□ -1.37
SIN3B-208ENST00000596638 PRB4P10163 310 aaPredicted RBP6.51□□□□□ -1.37
SIN3B-208ENST00000596638 PPIFP30405 207 aaKnown RBP6.51□□□□□ -1.37
SIN3B-208ENST00000596638 TCTAP57738 103 aa6.51□□□□□ -1.37
SIN3B-208ENST00000596638 SUMO2P61956 95 aaKnown RBP6.51□□□□□ -1.37
SIN3B-208ENST00000596638 ATP5G2Q06055 141 aa6.51□□□□□ -1.37
SIN3B-208ENST00000596638 GAGE13Q4V321 117 aa6.51□□□□□ -1.37
SIN3B-208ENST00000596638 TM4SF20Q53R12 229 aa6.51□□□□□ -1.37
SIN3B-208ENST00000596638 C19orf54Q5BKX5 351 aa6.51□□□□□ -1.37
SIN3B-208ENST00000596638 RNF182Q8N6D2 247 aa6.51□□□□□ -1.37
SIN3B-208ENST00000596638 FAM19A4Q96LR4 140 aa6.51□□□□□ -1.37
SIN3B-208ENST00000596638 SCGB3A1Q96QR1 104 aa6.51□□□□□ -1.37
SIN3B-208ENST00000596638 HIST1H4GQ99525 98 aa6.51□□□□□ -1.37
SIN3B-208ENST00000596638 TTTY13Q9BZ97 58 aa6.51□□□□□ -1.37
SIN3B-208ENST00000596638 IGHV4OR15-8A0A075B7B6 117 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms