RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 TRBV6-4A0A1B0GX49 114 aa8.83□□□□□ -1
LIG1-212ENST00000596549 PPT1P50897 306 aa8.83□□□□□ -1
LIG1-212ENST00000596549 RHOHQ15669 191 aa8.83□□□□□ -1
LIG1-212ENST00000596549 NHLRC2Q8NBF2 726 aa8.83□□□□□ -1
LIG1-212ENST00000596549 HIST1H2BAQ96A08 127 aa8.83□□□□□ -1
LIG1-212ENST00000596549 PARLQ9H300 379 aa8.83□□□□□ -1
LIG1-212ENST00000596549 ABCA13Q86UQ4 5058 aa8.83□□□□□ -1
LIG1-212ENST00000596549 FUSP35637 526 aaKnown RBP eCLIP8.82□□□□□ -1
LIG1-212ENST00000596549 TIRAPP58753 221 aa8.82□□□□□ -1
LIG1-212ENST00000596549 COX8CQ7Z4L0 72 aa8.82□□□□□ -1
LIG1-212ENST00000596549 NKX6-2Q9C056 277 aaPredicted RBP8.82□□□□□ -1
LIG1-212ENST00000596549 FABP5P3A8MUU1 101 aa8.81□□□□□ -1
LIG1-212ENST00000596549 H3BVH4 76 aa8.81□□□□□ -1
LIG1-212ENST00000596549 M0R036 132 aa8.81□□□□□ -1
LIG1-212ENST00000596549 CIDEAO60543 219 aa8.81□□□□□ -1
LIG1-212ENST00000596549 SH2D1AO60880 128 aa8.81□□□□□ -1
LIG1-212ENST00000596549 LINC00694P0DN24 101 aa8.81□□□□□ -1
LIG1-212ENST00000596549 ASIPP42127 132 aa8.81□□□□□ -1
LIG1-212ENST00000596549 Q6ZSN1 163 aa8.81□□□□□ -1
LIG1-212ENST00000596549 FMC1Q96HJ9 113 aa8.81□□□□□ -1
LIG1-212ENST00000596549 JPT2Q9H910 190 aa8.81□□□□□ -1
LIG1-212ENST00000596549 IL36BQ9NZH7 164 aa8.81□□□□□ -1
LIG1-212ENST00000596549 HMSDA8MTL9 139 aa8.8□□□□□ -1
LIG1-212ENST00000596549 B4DEV8 164 aa8.8□□□□□ -1
LIG1-212ENST00000596549 KRBOX1C9JBD0 128 aa8.8□□□□□ -1
LIG1-212ENST00000596549 BCL2L11O43521 198 aa8.8□□□□□ -1
LIG1-212ENST00000596549 LTAP01374 205 aa8.8□□□□□ -1
LIG1-212ENST00000596549 SEC11BP0C7V7 166 aa8.8□□□□□ -1
LIG1-212ENST00000596549 MGST1P10620 155 aaKnown RBP8.8□□□□□ -1
LIG1-212ENST00000596549 ERVFC1-1P60608 527 aa8.8□□□□□ -1
LIG1-212ENST00000596549 DNLZQ5SXM8 178 aa8.8□□□□□ -1
LIG1-212ENST00000596549 UFSP1Q6NVU6 142 aa8.8□□□□□ -1
LIG1-212ENST00000596549 SH2D6Q7Z4S9 175 aa8.8□□□□□ -1
LIG1-212ENST00000596549 PRADC1Q9BSG0 188 aa8.8□□□□□ -1
LIG1-212ENST00000596549 MSRB1Q9NZV6 116 aa8.8□□□□□ -1
LIG1-212ENST00000596549 A0A087WTM6 91 aa8.79□□□□□ -1
LIG1-212ENST00000596549 IGHV3-38A0A0C4DH36 116 aa8.79□□□□□ -1
LIG1-212ENST00000596549 TRBV6-1A0A0K0K1D8 114 aa8.79□□□□□ -1
LIG1-212ENST00000596549 K7EP13 123 aa8.79□□□□□ -1
LIG1-212ENST00000596549 PAGE4O60829 102 aa8.79□□□□□ -1
LIG1-212ENST00000596549 CRYGDP07320 174 aa8.79□□□□□ -1
LIG1-212ENST00000596549 EVI2AP22794 236 aa8.79□□□□□ -1
LIG1-212ENST00000596549 S100A4P26447 101 aaKnown RBP8.79□□□□□ -1
LIG1-212ENST00000596549 UBE2G1P62253 170 aa8.79□□□□□ -1
LIG1-212ENST00000596549 ZNF674Q2M3X9 581 aa8.79□□□□□ -1
LIG1-212ENST00000596549 PIK3CD-AS1Q5SR53 167 aa8.79□□□□□ -1
LIG1-212ENST00000596549 CST9LP1Q5W188 147 aa8.79□□□□□ -1
LIG1-212ENST00000596549 NFE4Q86UQ8 179 aa8.79□□□□□ -1
LIG1-212ENST00000596549 MAPKAPK5-AS1Q8N8E1 139 aa8.79□□□□□ -1
LIG1-212ENST00000596549 FAM213BQ8TBF2 198 aa8.79□□□□□ -1
LIG1-212ENST00000596549 TCEAL7Q9BRU2 100 aa8.79□□□□□ -1
LIG1-212ENST00000596549 ZNF471Q9BX82 626 aaPredicted RBP8.79□□□□□ -1
LIG1-212ENST00000596549 SAMD10Q9BYL1 202 aa8.79□□□□□ -1
LIG1-212ENST00000596549 Q9UF83 564 aa8.79□□□□□ -1
LIG1-212ENST00000596549 ZFP30Q9Y2G7 519 aa8.79□□□□□ -1
LIG1-212ENST00000596549 TRAV9-2A0A087WT02 112 aa8.78□□□□□ -1
LIG1-212ENST00000596549 A0A1B0GV50 99 aa8.78□□□□□ -1
LIG1-212ENST00000596549 SCO2A0A1W2PP80 73 aa8.78□□□□□ -1
LIG1-212ENST00000596549 GRIFINA4D1Z8 144 aa8.78□□□□□ -1
LIG1-212ENST00000596549 A8MWV9 139 aa8.78□□□□□ -1
LIG1-212ENST00000596549 AKR1C3P42330 323 aa8.78□□□□□ -1
LIG1-212ENST00000596549 LINC01559Q495D7 138 aa8.78□□□□□ -1
LIG1-212ENST00000596549 LINC01556Q5JQF7 62 aa8.78□□□□□ -1
LIG1-212ENST00000596549 DMRTA1Q5VZB9 504 aa8.78□□□□□ -1
LIG1-212ENST00000596549 ZFP2Q6ZN57 461 aa8.78□□□□□ -1
LIG1-212ENST00000596549 STOML3Q8TAV4 291 aa8.78□□□□□ -1
LIG1-212ENST00000596549 MBD3L1Q8WWY6 194 aa8.78□□□□□ -1
LIG1-212ENST00000596549 KANTRA0A1W2PQU2 76 aa8.77□□□□□ -1.01
LIG1-212ENST00000596549 UMAD1C9J7I0 102 aa8.77□□□□□ -1.01
LIG1-212ENST00000596549 ARMS2P0C7Q2 107 aa8.77□□□□□ -1.01
LIG1-212ENST00000596549 LGALSLQ3ZCW2 172 aaPredicted RBP8.77□□□□□ -1.01
LIG1-212ENST00000596549 FAM162BQ5T6X4 162 aa8.77□□□□□ -1.01
LIG1-212ENST00000596549 LELP1Q5T871 98 aa8.77□□□□□ -1.01
LIG1-212ENST00000596549 Q8N3U1 123 aa8.77□□□□□ -1.01
LIG1-212ENST00000596549 C10orf126Q8N4M7 172 aa8.77□□□□□ -1.01
LIG1-212ENST00000596549 C14orf178Q8N769 122 aaPredicted RBP8.77□□□□□ -1.01
LIG1-212ENST00000596549 SCRT2Q9NQ03 307 aa8.77□□□□□ -1.01
LIG1-212ENST00000596549 TMSB15BA0A087X1C1 80 aa8.76□□□□□ -1.01
LIG1-212ENST00000596549 A0A0D9SG52 128 aa8.76□□□□□ -1.01
LIG1-212ENST00000596549 GAGE12JA6NER3 117 aa8.76□□□□□ -1.01
LIG1-212ENST00000596549 GAGE1Q13065 139 aa8.76□□□□□ -1.01
LIG1-212ENST00000596549 GAGE4Q13068 117 aa8.76□□□□□ -1.01
LIG1-212ENST00000596549 GAGE5Q13069 117 aa8.76□□□□□ -1.01
LIG1-212ENST00000596549 GAGE13Q4V321 117 aa8.76□□□□□ -1.01
LIG1-212ENST00000596549 OR10J3Q5JRS4 329 aa8.76□□□□□ -1.01
LIG1-212ENST00000596549 ATP6V0E2Q8NHE4 81 aa8.76□□□□□ -1.01
LIG1-212ENST00000596549 SFT2D1Q8WV19 159 aa8.76□□□□□ -1.01
LIG1-212ENST00000596549 GTSF1LQ9H1H1 148 aa8.76□□□□□ -1.01
LIG1-212ENST00000596549 IBA57-AS1B1ANH7 110 aa8.75□□□□□ -1.01
LIG1-212ENST00000596549 IGHV3-30P01768 117 aa8.75□□□□□ -1.01
LIG1-212ENST00000596549 IGHV3-33P01772 117 aa8.75□□□□□ -1.01
LIG1-212ENST00000596549 IGHV3-30-3P0DP02 117 aa8.75□□□□□ -1.01
LIG1-212ENST00000596549 IGHV3-30-5P0DP03 117 aa8.75□□□□□ -1.01
LIG1-212ENST00000596549 RPL19P84098 196 aaKnown RBP8.75□□□□□ -1.01
LIG1-212ENST00000596549 CDPF1Q6NVV7 123 aa8.75□□□□□ -1.01
LIG1-212ENST00000596549 TRAV8-6A0A0B4J262 113 aa8.74□□□□□ -1.01
LIG1-212ENST00000596549 M0R381 172 aa8.74□□□□□ -1.01
LIG1-212ENST00000596549 FAM74A4Q5TZK3 123 aa8.74□□□□□ -1.01
LIG1-212ENST00000596549 TMUB2Q71RG4 321 aa8.74□□□□□ -1.01
LIG1-212ENST00000596549 Q8N1X5 172 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms