RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 K7EQG2 157 aa17.2■□□□□ 0.34
SPTBN4-209ENST00000596411 FAM159AQ6UWV7 190 aa17.2■□□□□ 0.34
SPTBN4-209ENST00000596411 Q6YL49 198 aa17.2■□□□□ 0.34
SPTBN4-209ENST00000596411 LINC01549A6NIU2 74 aa17.2■□□□□ 0.34
SPTBN4-209ENST00000596411 TGFAP01135 160 aa17.2■□□□□ 0.34
SPTBN4-209ENST00000596411 LINC00315P59091 139 aa17.2■□□□□ 0.34
SPTBN4-209ENST00000596411 MRPL35Q9NZE8 188 aaKnown RBP17.2■□□□□ 0.34
SPTBN4-209ENST00000596411 USP24Q9UPU5 2620 aa17.19■□□□□ 0.34
SPTBN4-209ENST00000596411 IGKV2D-26A0A0A0MRZ7 120 aa17.19■□□□□ 0.34
SPTBN4-209ENST00000596411 ZC2HC1BQ5TFG8 222 aa17.19■□□□□ 0.34
SPTBN4-209ENST00000596411 A0A0J9YX75 114 aa17.18■□□□□ 0.34
SPTBN4-209ENST00000596411 SNRPD3P62318 126 aaKnown RBP17.18■□□□□ 0.34
SPTBN4-209ENST00000596411 CFAP46Q8IYW2 2715 aa17.18■□□□□ 0.34
SPTBN4-209ENST00000596411 F8VRH5 84 aa17.18■□□□□ 0.34
SPTBN4-209ENST00000596411 SRD5A1P18405 259 aa17.18■□□□□ 0.34
SPTBN4-209ENST00000596411 OR4C5Q8NGB2 326 aa17.18■□□□□ 0.34
SPTBN4-209ENST00000596411 RPL39LQ96EH5 51 aaKnown RBP17.18■□□□□ 0.34
SPTBN4-209ENST00000596411 UBE2E2Q96LR5 201 aa17.18■□□□□ 0.34
SPTBN4-209ENST00000596411 ZNF702PQ9H963 129 aa17.18■□□□□ 0.34
SPTBN4-209ENST00000596411 H7C1H1 209 aa17.17■□□□□ 0.34
SPTBN4-209ENST00000596411 C10orf99Q6UWK7 81 aa17.17■□□□□ 0.34
SPTBN4-209ENST00000596411 MGPP08493 103 aa17.16■□□□□ 0.34
SPTBN4-209ENST00000596411 IGHV4-31P0DP07 118 aa17.16■□□□□ 0.34
SPTBN4-209ENST00000596411 C9orf85Q96MD7 179 aa17.16■□□□□ 0.34
SPTBN4-209ENST00000596411 LRRC75A-AS1Q8N1F1 130 aa17.16■□□□□ 0.34
SPTBN4-209ENST00000596411 NEXN-AS1Q8NBZ9 246 aa17.16■□□□□ 0.34
SPTBN4-209ENST00000596411 BEX4Q9NWD9 120 aaPredicted RBP17.16■□□□□ 0.34
SPTBN4-209ENST00000596411 C9orf118A6NHY6 69 aa17.15■□□□□ 0.34
SPTBN4-209ENST00000596411 SCGB3A1Q96QR1 104 aa17.15■□□□□ 0.34
SPTBN4-209ENST00000596411 TMEM160Q9NX00 188 aa17.15■□□□□ 0.34
SPTBN4-209ENST00000596411 DUSP14O95147 198 aaKnown RBP17.14■□□□□ 0.33
SPTBN4-209ENST00000596411 TRAV8-6A0A0B4J262 113 aa17.14■□□□□ 0.33
SPTBN4-209ENST00000596411 SPRY2O43597 315 aa17.14■□□□□ 0.33
SPTBN4-209ENST00000596411 AMMECR1LQ6DCA0 310 aa17.14■□□□□ 0.33
SPTBN4-209ENST00000596411 GTSCR1Q86UQ5 136 aa17.14■□□□□ 0.33
SPTBN4-209ENST00000596411 ZNF688P0C7X2 276 aa17.13■□□□□ 0.33
SPTBN4-209ENST00000596411 C2orf66Q6UXQ4 117 aa17.13■□□□□ 0.33
SPTBN4-209ENST00000596411 Q8N2B8 174 aa17.13■□□□□ 0.33
SPTBN4-209ENST00000596411 TCTAP57738 103 aa17.12■□□□□ 0.33
SPTBN4-209ENST00000596411 ERASQ7Z444 233 aa17.12■□□□□ 0.33
SPTBN4-209ENST00000596411 CHAC1Q9BUX1 264 aa17.12■□□□□ 0.33
SPTBN4-209ENST00000596411 USP9XQ93008 2570 aaPredicted RBP17.12■□□□□ 0.33
SPTBN4-209ENST00000596411 TRBV25-1A0A075B6N4 114 aa17.12■□□□□ 0.33
SPTBN4-209ENST00000596411 IGHV3-16A0A0C4DH30 117 aa17.12■□□□□ 0.33
SPTBN4-209ENST00000596411 TRBV6-5A0A0K0K1A5 114 aa17.12■□□□□ 0.33
SPTBN4-209ENST00000596411 POLR2KP53803 58 aaKnown RBP17.12■□□□□ 0.33
SPTBN4-209ENST00000596411 TAL2Q16559 108 aa17.12■□□□□ 0.33
SPTBN4-209ENST00000596411 CSTL1Q9H114 145 aa17.12■□□□□ 0.33
SPTBN4-209ENST00000596411 IGSF10Q6WRI0 2623 aa17.12■□□□□ 0.33
SPTBN4-209ENST00000596411 MUC4Q99102 2169 aa17.11■□□□□ 0.33
SPTBN4-209ENST00000596411 COL12A1Q99715 3063 aa17.11■□□□□ 0.33
SPTBN4-209ENST00000596411 FAM208BQ5VWN6 2430 aa17.11■□□□□ 0.33
SPTBN4-209ENST00000596411 ZFHX3Q15911 3703 aa17.11■□□□□ 0.33
SPTBN4-209ENST00000596411 TRAV12-3A0A0B4J271 114 aa17.11■□□□□ 0.33
SPTBN4-209ENST00000596411 CD7P09564 240 aa17.11■□□□□ 0.33
SPTBN4-209ENST00000596411 FOXI2Q6ZQN5 318 aa17.11■□□□□ 0.33
SPTBN4-209ENST00000596411 CHTOPQ9Y3Y2 248 aaKnown RBP17.11■□□□□ 0.33
SPTBN4-209ENST00000596411 LINC01619G3V211 115 aa17.1■□□□□ 0.33
SPTBN4-209ENST00000596411 CDKN1BP46527 198 aa17.1■□□□□ 0.33
SPTBN4-209ENST00000596411 SYNJ2BPP57105 145 aa17.1■□□□□ 0.33
SPTBN4-209ENST00000596411 HOXD3P31249 432 aaPredicted RBP17.1■□□□□ 0.33
SPTBN4-209ENST00000596411 SUMO4Q6EEV6 95 aa17.1■□□□□ 0.33
SPTBN4-209ENST00000596411 BAALCQ8WXS3 180 aa17.1■□□□□ 0.33
SPTBN4-209ENST00000596411 TM2D2Q9BX73 214 aa17.1■□□□□ 0.33
SPTBN4-209ENST00000596411 SYT8Q8NBV8 401 aa17.09■□□□□ 0.33
SPTBN4-209ENST00000596411 VPS13CQ709C8 3753 aa17.08■□□□□ 0.33
SPTBN4-209ENST00000596411 SELENOKQ9Y6D0 94 aa17.08■□□□□ 0.33
SPTBN4-209ENST00000596411 IGHV1OR15-1A0A075B7D0 117 aa17.07■□□□□ 0.32
SPTBN4-209ENST00000596411 TRAV2A0A0B4J234 112 aa17.07■□□□□ 0.32
SPTBN4-209ENST00000596411 A8MTW9 85 aa17.07■□□□□ 0.32
SPTBN4-209ENST00000596411 DEFB113Q30KQ7 82 aa17.07■□□□□ 0.32
SPTBN4-209ENST00000596411 CYSLTR1Q9Y271 337 aa17.07■□□□□ 0.32
SPTBN4-209ENST00000596411 CELSR1Q9NYQ6 3014 aa17.07■□□□□ 0.32
SPTBN4-209ENST00000596411 CR1P17927 2039 aa17.07■□□□□ 0.32
SPTBN4-209ENST00000596411 PRRC2AP48634 2157 aaKnown RBP17.07■□□□□ 0.32
SPTBN4-209ENST00000596411 SPG11Q96JI7 2443 aa17.07■□□□□ 0.32
SPTBN4-209ENST00000596411 VCYO14598 125 aa17.07■□□□□ 0.32
SPTBN4-209ENST00000596411 UFSP1Q6NVU6 142 aa17.07■□□□□ 0.32
SPTBN4-209ENST00000596411 AMTNQ6UX39 209 aa17.07■□□□□ 0.32
SPTBN4-209ENST00000596411 MAPK1IP1LQ8NDC0 245 aa17.07■□□□□ 0.32
SPTBN4-209ENST00000596411 BBC3Q96PG8 261 aaPredicted RBP17.07■□□□□ 0.32
SPTBN4-209ENST00000596411 TRBV27A0A0K0K1C4 114 aa17.06■□□□□ 0.32
SPTBN4-209ENST00000596411 PRB1P04280 392 aa17.06■□□□□ 0.32
SPTBN4-209ENST00000596411 RIPPLY3P57055 190 aa17.06■□□□□ 0.32
SPTBN4-209ENST00000596411 GTF2H5Q6ZYL4 71 aa17.06■□□□□ 0.32
SPTBN4-209ENST00000596411 ZNF843Q8N446 348 aa17.06■□□□□ 0.32
SPTBN4-209ENST00000596411 TTTY13Q9BZ97 58 aa17.06■□□□□ 0.32
SPTBN4-209ENST00000596411 HOXA3O43365 443 aaPredicted RBP17.05■□□□□ 0.32
SPTBN4-209ENST00000596411 ZFP2Q6ZN57 461 aa17.04■□□□□ 0.32
SPTBN4-209ENST00000596411 CEND1Q8N111 149 aa17.04■□□□□ 0.32
SPTBN4-209ENST00000596411 TMEM141Q96I45 108 aa17.04■□□□□ 0.32
SPTBN4-209ENST00000596411 TIMM17AQ99595 171 aa17.04■□□□□ 0.32
SPTBN4-209ENST00000596411 ZNF256Q9Y2P7 627 aaPredicted RBP17.04■□□□□ 0.32
SPTBN4-209ENST00000596411 SMIM13P0DJ93 91 aa17.03■□□□□ 0.32
SPTBN4-209ENST00000596411 PAPPA-AS1Q5QFB9 102 aa17.03■□□□□ 0.32
SPTBN4-209ENST00000596411 Q8N1Y9 231 aa17.03■□□□□ 0.32
SPTBN4-209ENST00000596411 MAPKAPK5-AS1Q8N8E1 139 aa17.03■□□□□ 0.32
SPTBN4-209ENST00000596411 JMJD8Q96S16 334 aa17.03■□□□□ 0.32
SPTBN4-209ENST00000596411 KIR2DL4Q99706 377 aa17.03■□□□□ 0.32
SPTBN4-209ENST00000596411 JPT2Q9H910 190 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms