RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 NBEAP1P0C6P0 100 aa14.49□□□□□ -0.09
LSM4-203ENST00000593829 RPL7P18124 248 aaKnown RBP14.49□□□□□ -0.09
LSM4-203ENST00000593829 RNASE8Q8TDE3 154 aaKnown RBP14.49□□□□□ -0.09
LSM4-203ENST00000593829 TMEM191AQ9H0A3 160 aa14.49□□□□□ -0.09
LSM4-203ENST00000593829 ZMAT4Q9H898 229 aa14.49□□□□□ -0.09
LSM4-203ENST00000593829 P01737 135 aa14.48□□□□□ -0.09
LSM4-203ENST00000593829 GTSF1Q8WW33 167 aa14.48□□□□□ -0.09
LSM4-203ENST00000593829 TM2D3Q9BRN9 247 aa14.48□□□□□ -0.09
LSM4-203ENST00000593829 CLEC5AQ9NY25 188 aa14.48□□□□□ -0.09
LSM4-203ENST00000593829 LEPROTL1O95214 131 aa14.47□□□□□ -0.09
LSM4-203ENST00000593829 ID1P41134 155 aa14.47□□□□□ -0.09
LSM4-203ENST00000593829 PSMG4Q5JS54 123 aa14.47□□□□□ -0.09
LSM4-203ENST00000593829 SAMD13Q5VXD3 122 aa14.47□□□□□ -0.09
LSM4-203ENST00000593829 GATD1Q8NB37 220 aa14.47□□□□□ -0.09
LSM4-203ENST00000593829 FOXA3P55318 350 aaPredicted RBP14.47□□□□□ -0.09
LSM4-203ENST00000593829 TCRAP04437 139 aa14.46□□□□□ -0.09
LSM4-203ENST00000593829 RPL35AP18077 110 aaKnown RBP14.46□□□□□ -0.09
LSM4-203ENST00000593829 APOC4P55056 127 aa14.46□□□□□ -0.09
LSM4-203ENST00000593829 SAPCD1Q5SSQ6 148 aa14.46□□□□□ -0.09
LSM4-203ENST00000593829 SLC25A34Q6PIV7 304 aa14.46□□□□□ -0.09
LSM4-203ENST00000593829 SPATA25Q9BR10 227 aa14.46□□□□□ -0.09
LSM4-203ENST00000593829 SOCS3O14543 225 aa14.45□□□□□ -0.1
LSM4-203ENST00000593829 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.45□□□□□ -0.1
LSM4-203ENST00000593829 U3KQK5 164 aa14.45□□□□□ -0.1
LSM4-203ENST00000593829 DAZAP1Q96EP5 407 aaKnown RBP14.45□□□□□ -0.1
LSM4-203ENST00000593829 C16orf92Q96LL3 132 aa14.45□□□□□ -0.1
LSM4-203ENST00000593829 C17orf77Q96MU5 243 aa14.45□□□□□ -0.1
LSM4-203ENST00000593829 SCRT2Q9NQ03 307 aa14.45□□□□□ -0.1
LSM4-203ENST00000593829 TMEM14CQ9P0S9 112 aa14.45□□□□□ -0.1
LSM4-203ENST00000593829 HSPB8Q9UJY1 196 aa14.45□□□□□ -0.1
LSM4-203ENST00000593829 HSBP1L1C9JCN9 74 aa14.44□□□□□ -0.1
LSM4-203ENST00000593829 BVES-AS1Q5T3Y7 98 aa14.44□□□□□ -0.1
LSM4-203ENST00000593829 BPIFA4PQ86YQ2 179 aa14.44□□□□□ -0.1
LSM4-203ENST00000593829 STHQ8IWL8 128 aa14.44□□□□□ -0.1
LSM4-203ENST00000593829 KIR2DL5BQ8NHK3 375 aa14.44□□□□□ -0.1
LSM4-203ENST00000593829 MAP1LC3CQ9BXW4 147 aa14.44□□□□□ -0.1
LSM4-203ENST00000593829 OTORQ9NRC9 128 aa14.44□□□□□ -0.1
LSM4-203ENST00000593829 TAX1BP3O14907 124 aa14.43□□□□□ -0.1
LSM4-203ENST00000593829 Q6ZVH6 145 aa14.43□□□□□ -0.1
LSM4-203ENST00000593829 OR4C5Q8NGB2 326 aa14.43□□□□□ -0.1
LSM4-203ENST00000593829 BLNKQ8WV28 456 aa14.43□□□□□ -0.1
LSM4-203ENST00000593829 PGLYRP4Q96LB8 373 aa14.43□□□□□ -0.1
LSM4-203ENST00000593829 Q9H3A6 140 aa14.43□□□□□ -0.1
LSM4-203ENST00000593829 A0A087X0K7 114 aa14.43□□□□□ -0.1
LSM4-203ENST00000593829 KNCNA6PVL3 124 aa14.43□□□□□ -0.1
LSM4-203ENST00000593829 MRPS12O15235 138 aaKnown RBP14.43□□□□□ -0.1
LSM4-203ENST00000593829 Q86TA4 180 aa14.43□□□□□ -0.1
LSM4-203ENST00000593829 PMCHL2Q9BQD1 86 aa14.43□□□□□ -0.1
LSM4-203ENST00000593829 MPV17L2Q567V2 206 aa14.42□□□□□ -0.1
LSM4-203ENST00000593829 A0A1B0GW15 77 aa14.41□□□□□ -0.1
LSM4-203ENST00000593829 PPBPP02775 128 aa14.41□□□□□ -0.1
LSM4-203ENST00000593829 LINC01545Q5VT33 79 aa14.41□□□□□ -0.1
LSM4-203ENST00000593829 CSTL1Q9H114 145 aa14.41□□□□□ -0.1
LSM4-203ENST00000593829 HIST1H1AQ02539 215 aaPredicted RBP14.41□□□□□ -0.1
LSM4-203ENST00000593829 C21orf62-AS1Q17RA5 79 aa14.41□□□□□ -0.1
LSM4-203ENST00000593829 LINC00173Q6ZV60 143 aa14.41□□□□□ -0.1
LSM4-203ENST00000593829 ARL6IP6Q8N6S5 226 aa14.41□□□□□ -0.1
LSM4-203ENST00000593829 hDV102S1A0JD36 115 aa14.4□□□□□ -0.1
LSM4-203ENST00000593829 VAMP3Q15836 100 aa14.4□□□□□ -0.1
LSM4-203ENST00000593829 TRPT1Q86TN4 253 aaKnown RBP14.4□□□□□ -0.1
LSM4-203ENST00000593829 RETNQ9HD89 108 aa14.4□□□□□ -0.1
LSM4-203ENST00000593829 NUDT3O95989 172 aa14.39□□□□□ -0.11
LSM4-203ENST00000593829 C20orf173Q96LM9 149 aa14.39□□□□□ -0.11
LSM4-203ENST00000593829 TRAV8-2A0A0B4J237 113 aa14.38□□□□□ -0.11
LSM4-203ENST00000593829 IGLV2-11P01706 119 aa14.38□□□□□ -0.11
LSM4-203ENST00000593829 FOXI2Q6ZQN5 318 aa14.38□□□□□ -0.11
LSM4-203ENST00000593829 SGK494Q96LW2 274 aa14.38□□□□□ -0.11
LSM4-203ENST00000593829 RPH3ALQ9UNE2 315 aa14.38□□□□□ -0.11
LSM4-203ENST00000593829 NBEAL2Q6ZNJ1 2754 aa14.38□□□□□ -0.11
LSM4-203ENST00000593829 H3BMM0 161 aa14.37□□□□□ -0.11
LSM4-203ENST00000593829 HLA-DRB4P13762 266 aa14.37□□□□□ -0.11
LSM4-203ENST00000593829 RIGQ13278 110 aa14.37□□□□□ -0.11
LSM4-203ENST00000593829 IGFL4Q6B9Z1 124 aa14.37□□□□□ -0.11
LSM4-203ENST00000593829 HLA-DRB4X5D2U9 266 aa14.37□□□□□ -0.11
LSM4-203ENST00000593829 A0A1B0GUT8 65 aa14.37□□□□□ -0.11
LSM4-203ENST00000593829 Q6AWC8 147 aa14.37□□□□□ -0.11
LSM4-203ENST00000593829 SLC50A1Q9BRV3 221 aa14.37□□□□□ -0.11
LSM4-203ENST00000593829 HUWE1Q7Z6Z7 4374 aaKnown RBP14.36□□□□□ -0.11
LSM4-203ENST00000593829 COX8AP10176 69 aa14.36□□□□□ -0.11
LSM4-203ENST00000593829 DEFB1P60022 68 aa14.36□□□□□ -0.11
LSM4-203ENST00000593829 DEFB135Q30KP9 77 aa14.36□□□□□ -0.11
LSM4-203ENST00000593829 MORN3Q6PF18 240 aaPredicted RBP14.36□□□□□ -0.11
LSM4-203ENST00000593829 RNF182Q8N6D2 247 aa14.36□□□□□ -0.11
LSM4-203ENST00000593829 TMEM75Q8N9X5 138 aa14.36□□□□□ -0.11
LSM4-203ENST00000593829 TP53TG1Q9Y2A0 90 aa14.36□□□□□ -0.11
LSM4-203ENST00000593829 LYPD1Q8N2G4 141 aa14.35□□□□□ -0.11
LSM4-203ENST00000593829 OVOL2Q9BRP0 275 aa14.35□□□□□ -0.11
LSM4-203ENST00000593829 H3BTX0 84 aa14.35□□□□□ -0.11
LSM4-203ENST00000593829 SPRY2O43597 315 aa14.35□□□□□ -0.11
LSM4-203ENST00000593829 COTL1Q14019 142 aa14.35□□□□□ -0.11
LSM4-203ENST00000593829 MUC21A0A0G2JKD1 596 aa14.34□□□□□ -0.11
LSM4-203ENST00000593829 MUC21A0A140T8X8 626 aa14.34□□□□□ -0.11
LSM4-203ENST00000593829 PSG3Q16557 428 aa14.34□□□□□ -0.11
LSM4-203ENST00000593829 MUC21Q5SSG8 566 aa14.34□□□□□ -0.11
LSM4-203ENST00000593829 RNF183Q96D59 192 aa14.34□□□□□ -0.11
LSM4-203ENST00000593829 AP5S1Q9NUS5 200 aa14.34□□□□□ -0.11
LSM4-203ENST00000593829 TENM3Q9P273 2699 aa14.34□□□□□ -0.11
LSM4-203ENST00000593829 AGRNO00468 2067 aa14.33□□□□□ -0.11
LSM4-203ENST00000593829 A0A0J9YX75 114 aa14.33□□□□□ -0.11
LSM4-203ENST00000593829 F6UB75 175 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms