RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ODAMA1E959 279 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 A6NDX4 124 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 BUB1B-PAK6H3BSN5 160 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 ZNF324O75467 553 aaPredicted RBP3.09□□□□□ -1.91
SMAD4-216ENST00000593223 IFITM1P13164 125 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 RPS10P46783 165 aaKnown RBP3.09□□□□□ -1.91
SMAD4-216ENST00000593223 NMUP48645 174 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 DYNLT3P51808 116 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 LSM3P62310 102 aaKnown RBP3.09□□□□□ -1.91
SMAD4-216ENST00000593223 AKR1C1Q04828 323 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 BSPH1Q075Z2 132 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 TMEM155Q4W5P6 130 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 LINC01554Q52M75 96 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 AAED1Q7RTV5 226 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 TEN1Q86WV5 123 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 C10orf111Q8N326 155 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 KCNRGQ8N5I3 272 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 PACRGLQ8N7B6 248 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 Q8N9W7 124 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 OR10P1Q8NGE3 313 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 OR8D4Q8NGM9 314 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 STAG3L4Q8TBR4 150 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 RBPMSQ93062 196 aaKnown RBP3.09□□□□□ -1.91
SMAD4-216ENST00000593223 B9D2Q9BPU9 175 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 FAM60AQ9NP50 221 aa3.09□□□□□ -1.91
SMAD4-216ENST00000593223 NOP16Q9Y3C1 178 aaKnown RBP3.09□□□□□ -1.91
SMAD4-216ENST00000593223 DNAH1Q9P2D7 4330 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 TRAV12-2A0A075B6T6 113 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 TRGV10A0A0A0MS01 117 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 IGKV1-12A0A0C4DH73 117 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 A0A0D9SG52 128 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 TCRBV3S1A0A5B6 114 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 BPY2O14599 106 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 HIST1H2BKO60814 126 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 KLF7O75840 302 aaPredicted RBP3.08□□□□□ -1.92
SMAD4-216ENST00000593223 IGKV1D-12P01611 117 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 TCRAP04437 139 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 HIST1H2BJP06899 126 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 IGHV1-8P0DP01 117 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 UBA52P62987 128 aaKnown RBP3.08□□□□□ -1.92
SMAD4-216ENST00000593223 DEFB113Q30KQ7 82 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 LGALS9BQ3B8N2 356 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 RNASE13Q5GAN3 156 aaKnown RBP3.08□□□□□ -1.92
SMAD4-216ENST00000593223 LGALS9CQ6DKI2 356 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 SVBPQ8N300 66 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 LINC00311Q8N616 119 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 DAND5Q8N907 189 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 OR10G2Q8NGC3 310 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 OR4B1Q8NGF8 309 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 MAL2Q969L2 176 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 ZC2HC1AQ96GY0 325 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 PRELID3AQ96N28 172 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 DPY30Q9C005 99 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 RPP21Q9H633 154 aaKnown RBP3.08□□□□□ -1.92
SMAD4-216ENST00000593223 SAR1AQ9NR31 198 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 C8orf17Q9NRJ1 99 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 ZNF586Q9NXT0 402 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 C21orf62Q9NYP8 219 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 ZNF835Q9Y2P0 537 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 CHCHD2Q9Y6H1 151 aaPredicted RBP3.08□□□□□ -1.92
SMAD4-216ENST00000593223 ANAPC1Q9H1A4 1944 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 MDC1Q14676 2089 aaKnown RBP3.08□□□□□ -1.92
SMAD4-216ENST00000593223 SEC16AO15027 2179 aa3.08□□□□□ -1.92
SMAD4-216ENST00000593223 IGLV11-55A0A075B6I3 123 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 IGHV3-49A0A0A0MS15 119 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 IGHV3-21A0A0B4J1V1 117 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 IGHV5-51A0A0C4DH38 117 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 IGHV5-10-1A0A0J9YXX1 117 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 K7ERS5 55 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 HRASP01112 189 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 CXCL1P09341 107 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 LINC00032P0C843 101 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 TRAPPC2P0DI81 140 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 TRAPPC2BP0DI82 140 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 PTHLHP12272 177 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 NPPCP23582 126 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 CRYBB3P26998 211 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 ETV6P41212 452 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 RPL27AP46776 148 aaKnown RBP3.07□□□□□ -1.92
SMAD4-216ENST00000593223 ZNF90Q03938 601 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 RPL18Q07020 188 aaKnown RBP3.07□□□□□ -1.92
SMAD4-216ENST00000593223 Q56UQ5 140 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 CLLU1Q5K131 121 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 ZNF678Q5SXM1 525 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 MRPL54Q6P161 138 aaKnown RBP3.07□□□□□ -1.92
SMAD4-216ENST00000593223 IGFL3Q6UXB1 125 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 TMEM91Q6ZNR0 172 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 SLC35E3Q7Z769 313 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 SAXO1Q8IYX7 474 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 MORN4Q8NDC4 146 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 BPIFB6Q8NFQ5 453 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 FDCSPQ8NFU4 85 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 RNASE6Q93091 150 aaKnown RBP3.07□□□□□ -1.92
SMAD4-216ENST00000593223 RAB37Q96AX2 223 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 SHANK2-AS3Q9BTD1 123 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 SEC11CQ9BY50 192 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 TXNL4BQ9NX01 149 aaKnown RBP3.07□□□□□ -1.92
SMAD4-216ENST00000593223 AP4S1Q9Y587 144 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 TRIP11Q15643 1979 aa3.07□□□□□ -1.92
SMAD4-216ENST00000593223 CACNA1CQ13936 2221 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms