RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 TRAV8-3A0A0A6YYJ7 113 aa9.92□□□□□ -0.82
DNMT1-228ENST00000592705 LRRK2Q5S007 2527 aa9.92□□□□□ -0.82
DNMT1-228ENST00000592705 IGLV11-55A0A075B6I3 123 aa9.92□□□□□ -0.82
DNMT1-228ENST00000592705 ETDBQ3ZM63 59 aa9.92□□□□□ -0.82
DNMT1-228ENST00000592705 SCRT2Q9NQ03 307 aa9.92□□□□□ -0.82
DNMT1-228ENST00000592705 GAGE7O76087 117 aa9.92□□□□□ -0.82
DNMT1-228ENST00000592705 GAGE12FP0CL80 117 aa9.92□□□□□ -0.82
DNMT1-228ENST00000592705 GAGE12GP0CL81 117 aa9.92□□□□□ -0.82
DNMT1-228ENST00000592705 GAGE12IP0CL82 117 aa9.92□□□□□ -0.82
DNMT1-228ENST00000592705 GTSF1Q8WW33 167 aa9.92□□□□□ -0.82
DNMT1-228ENST00000592705 LY6G6DO95868 133 aa9.91□□□□□ -0.82
DNMT1-228ENST00000592705 ZNF295-AS1Q8N0V1 137 aa9.91□□□□□ -0.82
DNMT1-228ENST00000592705 DEFB136Q30KP8 78 aa9.91□□□□□ -0.82
DNMT1-228ENST00000592705 GATD1Q8NB37 220 aa9.91□□□□□ -0.82
DNMT1-228ENST00000592705 SPAG8Q99932 426 aaPredicted RBP9.91□□□□□ -0.82
DNMT1-228ENST00000592705 ZFYVE26Q68DK2 2539 aa9.91□□□□□ -0.82
DNMT1-228ENST00000592705 DNAJC9-AS1A6NH13 148 aa9.91□□□□□ -0.82
DNMT1-228ENST00000592705 S100A7L2Q5SY68 101 aa9.91□□□□□ -0.82
DNMT1-228ENST00000592705 DENND4AQ7Z401 1863 aa9.91□□□□□ -0.82
DNMT1-228ENST00000592705 WNK1Q9H4A3 2382 aa9.91□□□□□ -0.82
DNMT1-228ENST00000592705 CFHR3Q02985 330 aa9.91□□□□□ -0.82
DNMT1-228ENST00000592705 LINC00173Q6ZV60 143 aa9.91□□□□□ -0.82
DNMT1-228ENST00000592705 KNCNA6PVL3 124 aa9.9□□□□□ -0.82
DNMT1-228ENST00000592705 K7ERJ3 54 aa9.9□□□□□ -0.82
DNMT1-228ENST00000592705 C12orf74Q32Q52 190 aa9.9□□□□□ -0.82
DNMT1-228ENST00000592705 SEM1Q6ZVN7 128 aa9.9□□□□□ -0.82
DNMT1-228ENST00000592705 TRBV6-1A0A0K0K1D8 114 aa9.9□□□□□ -0.82
DNMT1-228ENST00000592705 CCL25O15444 150 aa9.9□□□□□ -0.82
DNMT1-228ENST00000592705 SS18Q15532 418 aa9.9□□□□□ -0.82
DNMT1-228ENST00000592705 IGFBPL1Q8WX77 278 aa9.9□□□□□ -0.82
DNMT1-228ENST00000592705 PRO1854Q9UHT4 67 aa9.9□□□□□ -0.82
DNMT1-228ENST00000592705 PCP2Q8IVA1 136 aa9.9□□□□□ -0.82
DNMT1-228ENST00000592705 WI2-2373I1.2A0A1W2PRP0 233 aa9.9□□□□□ -0.83
DNMT1-228ENST00000592705 Q6ZVH6 145 aa9.9□□□□□ -0.83
DNMT1-228ENST00000592705 C6orf226Q5I0X4 101 aa9.89□□□□□ -0.83
DNMT1-228ENST00000592705 TEX22C9J3V5 150 aa9.89□□□□□ -0.83
DNMT1-228ENST00000592705 H3BMM0 161 aa9.89□□□□□ -0.83
DNMT1-228ENST00000592705 UBE2WQ96B02 151 aa9.89□□□□□ -0.83
DNMT1-228ENST00000592705 J3QQQ9 107 aa9.89□□□□□ -0.83
DNMT1-228ENST00000592705 ZNF561-AS1K7EIQ3 104 aa9.89□□□□□ -0.83
DNMT1-228ENST00000592705 TRAV12-2A0A075B6T6 113 aa9.89□□□□□ -0.83
DNMT1-228ENST00000592705 IGHV7-81A0A0B4J1V7 117 aa9.89□□□□□ -0.83
DNMT1-228ENST00000592705 SPART-AS1P0CW21 52 aa9.89□□□□□ -0.83
DNMT1-228ENST00000592705 PRSS29PA6NIE9 313 aa9.89□□□□□ -0.83
DNMT1-228ENST00000592705 CTSGP08311 255 aa9.89□□□□□ -0.83
DNMT1-228ENST00000592705 BRWD1-AS2P59051 145 aa9.89□□□□□ -0.83
DNMT1-228ENST00000592705 BLCAPP62952 87 aa9.88□□□□□ -0.83
DNMT1-228ENST00000592705 C11orf68Q9H3H3 251 aaKnown RBP9.88□□□□□ -0.83
DNMT1-228ENST00000592705 PKIGQ9Y2B9 76 aa9.88□□□□□ -0.83
DNMT1-228ENST00000592705 H3BMG7 143 aa9.88□□□□□ -0.83
DNMT1-228ENST00000592705 AZU1P20160 251 aa9.88□□□□□ -0.83
DNMT1-228ENST00000592705 IGLV1-47P01700 117 aa9.88□□□□□ -0.83
DNMT1-228ENST00000592705 FRMD6-AS1P0C7T7 363 aa9.88□□□□□ -0.83
DNMT1-228ENST00000592705 YPEL4Q96NS1 127 aa9.88□□□□□ -0.83
DNMT1-228ENST00000592705 ATP6V0BQ99437 205 aa9.88□□□□□ -0.83
DNMT1-228ENST00000592705 NDUFA12Q9UI09 145 aa9.88□□□□□ -0.83
DNMT1-228ENST00000592705 MUC22E2RYF6 1773 aaPredicted RBP9.88□□□□□ -0.83
DNMT1-228ENST00000592705 NCOA6Q14686 2063 aaPredicted RBP9.88□□□□□ -0.83
DNMT1-228ENST00000592705 E7EUB6 86 aa9.87□□□□□ -0.83
DNMT1-228ENST00000592705 IGHV4-31P0DP07 118 aa9.87□□□□□ -0.83
DNMT1-228ENST00000592705 ZNF503Q96F45 646 aa9.87□□□□□ -0.83
DNMT1-228ENST00000592705 JPT2Q9H910 190 aa9.87□□□□□ -0.83
DNMT1-228ENST00000592705 CRYGCP07315 174 aa9.87□□□□□ -0.83
DNMT1-228ENST00000592705 FGF6P10767 208 aa9.87□□□□□ -0.83
DNMT1-228ENST00000592705 RHOHQ15669 191 aa9.87□□□□□ -0.83
DNMT1-228ENST00000592705 ANKRD39Q53RE8 183 aa9.87□□□□□ -0.83
DNMT1-228ENST00000592705 GATA1P15976 413 aaPredicted RBP9.87□□□□□ -0.83
DNMT1-228ENST00000592705 EIF4EBP1Q13541 118 aaPredicted RBP9.87□□□□□ -0.83
DNMT1-228ENST00000592705 MSMPQ1L6U9 139 aa9.87□□□□□ -0.83
DNMT1-228ENST00000592705 MRPL36Q9P0J6 103 aaKnown RBP9.87□□□□□ -0.83
DNMT1-228ENST00000592705 EML6Q6ZMW3 1958 aa9.87□□□□□ -0.83
DNMT1-228ENST00000592705 GAGE12HA6NDE8 117 aa9.87□□□□□ -0.83
DNMT1-228ENST00000592705 LINC00574Q9H8X3 128 aa9.87□□□□□ -0.83
DNMT1-228ENST00000592705 SPANXA1Q9NS26 97 aa9.87□□□□□ -0.83
DNMT1-228ENST00000592705 C19orf71A6NCJ1 209 aa9.86□□□□□ -0.83
DNMT1-228ENST00000592705 GNRH2O43555 120 aa9.86□□□□□ -0.83
DNMT1-228ENST00000592705 TRBV25-1A0A075B6N4 114 aa9.86□□□□□ -0.83
DNMT1-228ENST00000592705 PROP1O75360 226 aa9.86□□□□□ -0.83
DNMT1-228ENST00000592705 SLURP1P55000 103 aa9.86□□□□□ -0.83
DNMT1-228ENST00000592705 CITED2Q99967 270 aaPredicted RBP9.86□□□□□ -0.83
DNMT1-228ENST00000592705 GAGE12JA6NER3 117 aa9.86□□□□□ -0.83
DNMT1-228ENST00000592705 GAGE4Q13068 117 aa9.86□□□□□ -0.83
DNMT1-228ENST00000592705 GAGE5Q13069 117 aa9.86□□□□□ -0.83
DNMT1-228ENST00000592705 NCKAP5O14513 1909 aa9.86□□□□□ -0.83
DNMT1-228ENST00000592705 BUB3O43684 328 aa9.85□□□□□ -0.83
DNMT1-228ENST00000592705 NDUFA11Q86Y39 141 aa9.85□□□□□ -0.83
DNMT1-228ENST00000592705 MED13Q9UHV7 2174 aa9.85□□□□□ -0.83
DNMT1-228ENST00000592705 IGHV3-16A0A0C4DH30 117 aa9.85□□□□□ -0.83
DNMT1-228ENST00000592705 ZNF625Q96I27 306 aaPredicted RBP9.85□□□□□ -0.83
DNMT1-228ENST00000592705 DNAJC30Q96LL9 226 aa9.85□□□□□ -0.83
DNMT1-228ENST00000592705 FOXI2Q6ZQN5 318 aa9.85□□□□□ -0.83
DNMT1-228ENST00000592705 MSRB1Q9NZV6 116 aa9.85□□□□□ -0.83
DNMT1-228ENST00000592705 TNCP24821 2201 aa9.84□□□□□ -0.83
DNMT1-228ENST00000592705 F6UB75 175 aa9.84□□□□□ -0.83
DNMT1-228ENST00000592705 IGKV1D-37A0A075B6S9 117 aa9.84□□□□□ -0.83
DNMT1-228ENST00000592705 INAFM2P0DMQ5 153 aa9.84□□□□□ -0.83
DNMT1-228ENST00000592705 CTRLP40313 264 aa9.84□□□□□ -0.83
DNMT1-228ENST00000592705 IGLV2-8P01709 118 aa9.84□□□□□ -0.83
DNMT1-228ENST00000592705 AMTNQ6UX39 209 aa9.84□□□□□ -0.83
DNMT1-228ENST00000592705 GAGE2AQ6NT46 116 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms