RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 C2orf66Q6UXQ4 117 aa8.74□□□□□ -1.01
ZNF540-210ENST00000592533 IGHV3OR16-10A0A075B7F0 116 aa8.73□□□□□ -1.01
ZNF540-210ENST00000592533 IGHV4-61A0A0C4DH41 118 aa8.73□□□□□ -1.01
ZNF540-210ENST00000592533 K7EMT4 169 aa8.73□□□□□ -1.01
ZNF540-210ENST00000592533 RNASE4P34096 147 aaKnown RBP8.73□□□□□ -1.01
ZNF540-210ENST00000592533 C10orf105Q8TEF2 133 aa8.73□□□□□ -1.01
ZNF540-210ENST00000592533 DAZ1Q9NQZ3 744 aaKnown RBP8.73□□□□□ -1.01
ZNF540-210ENST00000592533 OR11H12B2RN74 326 aa8.73□□□□□ -1.01
ZNF540-210ENST00000592533 C12orf74Q32Q52 190 aa8.73□□□□□ -1.01
ZNF540-210ENST00000592533 OR11H1Q8NG94 326 aa8.73□□□□□ -1.01
ZNF540-210ENST00000592533 OR11H2Q8NH07 326 aa8.73□□□□□ -1.01
ZNF540-210ENST00000592533 RHPN1-AS1Q9BWJ2 59 aa8.73□□□□□ -1.01
ZNF540-210ENST00000592533 KLK15Q9H2R5 256 aa8.72□□□□□ -1.01
ZNF540-210ENST00000592533 IGHV4-38-2P0DP08 117 aa8.72□□□□□ -1.01
ZNF540-210ENST00000592533 FOXI2Q6ZQN5 318 aa8.72□□□□□ -1.01
ZNF540-210ENST00000592533 ZFHX3Q15911 3703 aa8.72□□□□□ -1.01
ZNF540-210ENST00000592533 GNRH2O43555 120 aa8.71□□□□□ -1.01
ZNF540-210ENST00000592533 PRORYQ9H606 182 aa8.71□□□□□ -1.01
ZNF540-210ENST00000592533 H3BUX3 64 aa8.71□□□□□ -1.01
ZNF540-210ENST00000592533 J3KRW8 73 aa8.71□□□□□ -1.01
ZNF540-210ENST00000592533 DEFB1P60022 68 aa8.71□□□□□ -1.01
ZNF540-210ENST00000592533 ODF3Q96PU9 254 aa8.71□□□□□ -1.01
ZNF540-210ENST00000592533 PRSS29PA6NIE9 313 aa8.71□□□□□ -1.02
ZNF540-210ENST00000592533 F6UB75 175 aa8.71□□□□□ -1.02
ZNF540-210ENST00000592533 COX6B1P14854 86 aa8.71□□□□□ -1.02
ZNF540-210ENST00000592533 LY6DQ14210 128 aa8.71□□□□□ -1.02
ZNF540-210ENST00000592533 HIST1H4GQ99525 98 aa8.71□□□□□ -1.02
ZNF540-210ENST00000592533 F8W1H4 67 aa8.7□□□□□ -1.02
ZNF540-210ENST00000592533 IGHV3-11P01762 117 aa8.7□□□□□ -1.02
ZNF540-210ENST00000592533 MGPP08493 103 aa8.7□□□□□ -1.02
ZNF540-210ENST00000592533 LGALS1P09382 135 aaKnown RBP8.7□□□□□ -1.02
ZNF540-210ENST00000592533 POLR2KP53803 58 aaKnown RBP8.7□□□□□ -1.02
ZNF540-210ENST00000592533 DCANP1Q8TF63 244 aa8.7□□□□□ -1.02
ZNF540-210ENST00000592533 ZNF479Q96JC4 524 aa8.7□□□□□ -1.02
ZNF540-210ENST00000592533 PF4V1P10720 104 aa8.7□□□□□ -1.02
ZNF540-210ENST00000592533 RRN3P1Q2M238 152 aa8.7□□□□□ -1.02
ZNF540-210ENST00000592533 SPRY2O43597 315 aa8.69□□□□□ -1.02
ZNF540-210ENST00000592533 IGIPA6NJ69 53 aa8.69□□□□□ -1.02
ZNF540-210ENST00000592533 CRYGDP07320 174 aa8.69□□□□□ -1.02
ZNF540-210ENST00000592533 ID1P41134 155 aa8.69□□□□□ -1.02
ZNF540-210ENST00000592533 LY6EQ16553 131 aa8.69□□□□□ -1.02
ZNF540-210ENST00000592533 PAPPA-AS1Q5QFB9 102 aa8.69□□□□□ -1.02
ZNF540-210ENST00000592533 CYSLTR1Q9Y271 337 aa8.69□□□□□ -1.02
ZNF540-210ENST00000592533 TRBV6-5A0A0K0K1A5 114 aa8.69□□□□□ -1.02
ZNF540-210ENST00000592533 BLCAPP62952 87 aa8.69□□□□□ -1.02
ZNF540-210ENST00000592533 LCNL1Q6ZST4 164 aa8.69□□□□□ -1.02
ZNF540-210ENST00000592533 PRADC1Q9BSG0 188 aa8.69□□□□□ -1.02
ZNF540-210ENST00000592533 TSHBP01222 138 aa8.68□□□□□ -1.02
ZNF540-210ENST00000592533 RIPPLY3P57055 190 aa8.68□□□□□ -1.02
ZNF540-210ENST00000592533 RPL11P62913 178 aaKnown RBP8.68□□□□□ -1.02
ZNF540-210ENST00000592533 TMEM141Q96I45 108 aa8.68□□□□□ -1.02
ZNF540-210ENST00000592533 IGLV4-69A0A075B6H9 119 aa8.68□□□□□ -1.02
ZNF540-210ENST00000592533 LGALS9O00182 355 aa8.68□□□□□ -1.02
ZNF540-210ENST00000592533 GNLYP22749 145 aa8.68□□□□□ -1.02
ZNF540-210ENST00000592533 Q6ZS46 218 aa8.68□□□□□ -1.02
ZNF540-210ENST00000592533 TIMM17AQ99595 171 aa8.68□□□□□ -1.02
ZNF540-210ENST00000592533 CCL19Q99731 98 aa8.68□□□□□ -1.02
ZNF540-210ENST00000592533 SELENOKQ9Y6D0 94 aa8.68□□□□□ -1.02
ZNF540-210ENST00000592533 MSMBP08118 114 aa8.67□□□□□ -1.02
ZNF540-210ENST00000592533 FAM159AQ6UWV7 190 aa8.67□□□□□ -1.02
ZNF540-210ENST00000592533 ZFP2Q6ZN57 461 aa8.67□□□□□ -1.02
ZNF540-210ENST00000592533 C9orf85Q96MD7 179 aa8.67□□□□□ -1.02
ZNF540-210ENST00000592533 AKAP6Q13023 2319 aa8.67□□□□□ -1.02
ZNF540-210ENST00000592533 TMEM89A2RUT3 159 aa8.67□□□□□ -1.02
ZNF540-210ENST00000592533 DUSP14O95147 198 aaKnown RBP8.67□□□□□ -1.02
ZNF540-210ENST00000592533 SUMO4Q6EEV6 95 aa8.67□□□□□ -1.02
ZNF540-210ENST00000592533 TRBV27A0A0K0K1C4 114 aa8.67□□□□□ -1.02
ZNF540-210ENST00000592533 TEX48A0A1B0GUV7 120 aa8.67□□□□□ -1.02
ZNF540-210ENST00000592533 VCYO14598 125 aa8.67□□□□□ -1.02
ZNF540-210ENST00000592533 PSMB8P28062 276 aa8.67□□□□□ -1.02
ZNF540-210ENST00000592533 CLEC2AQ6UVW9 174 aa8.67□□□□□ -1.02
ZNF540-210ENST00000592533 SPANXB1Q9NS25 103 aaPredicted RBP8.67□□□□□ -1.02
ZNF540-210ENST00000592533 MORN3Q6PF18 240 aaPredicted RBP8.66□□□□□ -1.02
ZNF540-210ENST00000592533 PRO0461Q9UI25 63 aa8.66□□□□□ -1.02
ZNF540-210ENST00000592533 ITPR1Q14643 2758 aa8.66□□□□□ -1.02
ZNF540-210ENST00000592533 UBE2D1P51668 147 aa8.66□□□□□ -1.02
ZNF540-210ENST00000592533 PMVKQ15126 192 aa8.66□□□□□ -1.02
ZNF540-210ENST00000592533 RNF152Q8N8N0 203 aa8.66□□□□□ -1.02
ZNF540-210ENST00000592533 TP53TG1Q9Y2A0 90 aa8.66□□□□□ -1.02
ZNF540-210ENST00000592533 SPTAN1Q13813 2472 aaKnown RBP8.65□□□□□ -1.02
ZNF540-210ENST00000592533 IGHV4-30-2A0A087WSY4 118 aa8.65□□□□□ -1.02
ZNF540-210ENST00000592533 TMEM238LA0A1B0GVL6 79 aa8.65□□□□□ -1.02
ZNF540-210ENST00000592533 C11orf86A6NJI1 115 aa8.65□□□□□ -1.02
ZNF540-210ENST00000592533 A6NJY4 79 aa8.65□□□□□ -1.02
ZNF540-210ENST00000592533 ZNF815PA8K554 130 aa8.65□□□□□ -1.02
ZNF540-210ENST00000592533 IGHV3-16A0A0C4DH30 117 aa8.65□□□□□ -1.03
ZNF540-210ENST00000592533 GATA3P23771 443 aa8.65□□□□□ -1.03
ZNF540-210ENST00000592533 KIR2DL4Q99706 377 aa8.65□□□□□ -1.03
ZNF540-210ENST00000592533 HOXA3O43365 443 aaPredicted RBP8.64□□□□□ -1.03
ZNF540-210ENST00000592533 EDN2P20800 178 aa8.64□□□□□ -1.03
ZNF540-210ENST00000592533 IGKV3-7A0A075B6H7 116 aa8.64□□□□□ -1.03
ZNF540-210ENST00000592533 A0A0J9YX75 114 aa8.64□□□□□ -1.03
ZNF540-210ENST00000592533 HERVK_113P61574 105 aa8.64□□□□□ -1.03
ZNF540-210ENST00000592533 NSUN5P1Q3KNT7 163 aa8.64□□□□□ -1.03
ZNF540-210ENST00000592533 ZNF876PQ49A33 203 aa8.64□□□□□ -1.03
ZNF540-210ENST00000592533 CD7P09564 240 aa8.63□□□□□ -1.03
ZNF540-210ENST00000592533 RPL24P83731 157 aaKnown RBP8.63□□□□□ -1.03
ZNF540-210ENST00000592533 WFDC2Q14508 124 aa8.63□□□□□ -1.03
ZNF540-210ENST00000592533 PLEKHB2Q96CS7 222 aa8.63□□□□□ -1.03
ZNF540-210ENST00000592533 JPT2Q9H910 190 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms