RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 DPH3P1Q9H4G8 78 aa11.76□□□□□ -0.53
MBD1-227ENST00000592060 SNRPD3P62318 126 aaKnown RBP11.76□□□□□ -0.53
MBD1-227ENST00000592060 TMEM158Q8WZ71 300 aa11.76□□□□□ -0.53
MBD1-227ENST00000592060 WFDC11Q8NEX6 87 aa11.75□□□□□ -0.53
MBD1-227ENST00000592060 TEX15Q9BXT5 2789 aa11.75□□□□□ -0.53
MBD1-227ENST00000592060 ABCA12Q86UK0 2595 aa11.74□□□□□ -0.53
MBD1-227ENST00000592060 C7orf71A4D174 169 aa11.74□□□□□ -0.53
MBD1-227ENST00000592060 CD5LO43866 347 aa11.74□□□□□ -0.53
MBD1-227ENST00000592060 HINT1P49773 126 aaPredicted RBP11.74□□□□□ -0.53
MBD1-227ENST00000592060 WFDC12Q8WWY7 111 aa11.74□□□□□ -0.53
MBD1-227ENST00000592060 RASL10AQ92737 203 aa11.74□□□□□ -0.53
MBD1-227ENST00000592060 C18orf15Q96N68 181 aa11.74□□□□□ -0.53
MBD1-227ENST00000592060 MUC4Q99102 2169 aa11.74□□□□□ -0.53
MBD1-227ENST00000592060 CENPEQ02224 2701 aa11.74□□□□□ -0.53
MBD1-227ENST00000592060 COX8AP10176 69 aa11.74□□□□□ -0.53
MBD1-227ENST00000592060 SLURP1P55000 103 aa11.74□□□□□ -0.53
MBD1-227ENST00000592060 ANKRD39Q53RE8 183 aa11.74□□□□□ -0.53
MBD1-227ENST00000592060 TMEM86BQ8N661 226 aa11.74□□□□□ -0.53
MBD1-227ENST00000592060 C14orf178Q8N769 122 aaPredicted RBP11.74□□□□□ -0.53
MBD1-227ENST00000592060 POM121L12Q8N7R1 296 aa11.74□□□□□ -0.53
MBD1-227ENST00000592060 AP1S3Q96PC3 154 aa11.74□□□□□ -0.53
MBD1-227ENST00000592060 SMIM2Q9BVW6 85 aa11.74□□□□□ -0.53
MBD1-227ENST00000592060 TRAV12-3A0A0B4J271 114 aa11.73□□□□□ -0.53
MBD1-227ENST00000592060 LAGE3Q14657 143 aa11.73□□□□□ -0.53
MBD1-227ENST00000592060 DEFB136Q30KP8 78 aa11.73□□□□□ -0.53
MBD1-227ENST00000592060 FAM159AQ6UWV7 190 aa11.73□□□□□ -0.53
MBD1-227ENST00000592060 CREBBPQ92793 2442 aa11.73□□□□□ -0.53
MBD1-227ENST00000592060 TCTEX1D4Q5JR98 221 aa11.72□□□□□ -0.53
MBD1-227ENST00000592060 HIST2H2BCQ6DN03 193 aa11.72□□□□□ -0.53
MBD1-227ENST00000592060 KIF25-AS1Q9Y6Z4 181 aa11.72□□□□□ -0.53
MBD1-227ENST00000592060 OR1N2Q8NGR9 330 aa11.72□□□□□ -0.53
MBD1-227ENST00000592060 DKK2Q9UBU2 259 aa11.72□□□□□ -0.53
MBD1-227ENST00000592060 APCP25054 2843 aa11.71□□□□□ -0.53
MBD1-227ENST00000592060 MXRA5Q9NR99 2828 aa11.71□□□□□ -0.53
MBD1-227ENST00000592060 FGF6P10767 208 aa11.71□□□□□ -0.53
MBD1-227ENST00000592060 LINC00315P59091 139 aa11.71□□□□□ -0.53
MBD1-227ENST00000592060 ODF1Q14990 250 aa11.71□□□□□ -0.53
MBD1-227ENST00000592060 C4orf3Q8WVX3 66 aa11.71□□□□□ -0.53
MBD1-227ENST00000592060 RPL39LQ96EH5 51 aaKnown RBP11.71□□□□□ -0.53
MBD1-227ENST00000592060 C20orf78Q9BR46 151 aa11.71□□□□□ -0.53
MBD1-227ENST00000592060 ZMAT4Q9H898 229 aa11.71□□□□□ -0.53
MBD1-227ENST00000592060 LINC01619G3V211 115 aa11.7□□□□□ -0.54
MBD1-227ENST00000592060 DUSP14O95147 198 aaKnown RBP11.7□□□□□ -0.54
MBD1-227ENST00000592060 MGPP08493 103 aa11.7□□□□□ -0.54
MBD1-227ENST00000592060 SMIM17P0DL12 118 aa11.7□□□□□ -0.54
MBD1-227ENST00000592060 SUMO2P61956 95 aaKnown RBP11.7□□□□□ -0.54
MBD1-227ENST00000592060 FOXI2Q6ZQN5 318 aa11.7□□□□□ -0.54
MBD1-227ENST00000592060 IGKV3-20P01619 116 aa11.7□□□□□ -0.54
MBD1-227ENST00000592060 CD7P09564 240 aa11.7□□□□□ -0.54
MBD1-227ENST00000592060 AMTNQ6UX39 209 aa11.7□□□□□ -0.54
MBD1-227ENST00000592060 C2orf91Q6ZV80 131 aa11.7□□□□□ -0.54
MBD1-227ENST00000592060 TEX29Q8N6K0 151 aa11.7□□□□□ -0.54
MBD1-227ENST00000592060 C9orf85Q96MD7 179 aa11.7□□□□□ -0.54
MBD1-227ENST00000592060 TRAV12-2A0A075B6T6 113 aa11.69□□□□□ -0.54
MBD1-227ENST00000592060 IGHV3-16A0A0C4DH30 117 aa11.69□□□□□ -0.54
MBD1-227ENST00000592060 ATP5LO75964 103 aa11.69□□□□□ -0.54
MBD1-227ENST00000592060 ZNF25P17030 456 aaPredicted RBP11.69□□□□□ -0.54
MBD1-227ENST00000592060 G0S2P27469 103 aa11.69□□□□□ -0.54
MBD1-227ENST00000592060 CDKN1BP46527 198 aa11.69□□□□□ -0.54
MBD1-227ENST00000592060 NOTCH2Q04721 2471 aa11.69□□□□□ -0.54
MBD1-227ENST00000592060 SPINK13Q1W4C9 94 aa11.68□□□□□ -0.54
MBD1-227ENST00000592060 Q6ZSV7 163 aa11.68□□□□□ -0.54
MBD1-227ENST00000592060 AGRNO00468 2067 aa11.68□□□□□ -0.54
MBD1-227ENST00000592060 DNAJC9-AS1A6NH13 148 aa11.68□□□□□ -0.54
MBD1-227ENST00000592060 MPV17L2Q567V2 206 aa11.68□□□□□ -0.54
MBD1-227ENST00000592060 OR11H1Q8NG94 326 aa11.68□□□□□ -0.54
MBD1-227ENST00000592060 TMEM208Q9BTX3 173 aa11.68□□□□□ -0.54
MBD1-227ENST00000592060 A8MTW9 85 aa11.67□□□□□ -0.54
MBD1-227ENST00000592060 KRTAP1-1Q07627 177 aa11.67□□□□□ -0.54
MBD1-227ENST00000592060 OR9G4Q8NGQ1 327 aa11.67□□□□□ -0.54
MBD1-227ENST00000592060 FOXC2Q99958 501 aa11.67□□□□□ -0.54
MBD1-227ENST00000592060 TRAV2A0A0B4J234 112 aa11.67□□□□□ -0.54
MBD1-227ENST00000592060 K7EMI3 77 aa11.67□□□□□ -0.54
MBD1-227ENST00000592060 PRSS1P07477 247 aa11.67□□□□□ -0.54
MBD1-227ENST00000592060 ORMDL2Q53FV1 153 aa11.67□□□□□ -0.54
MBD1-227ENST00000592060 BVES-AS1Q5T3Y7 98 aa11.67□□□□□ -0.54
MBD1-227ENST00000592060 DUX3Q96PT4 197 aa11.67□□□□□ -0.54
MBD1-227ENST00000592060 JPT2Q9H910 190 aa11.67□□□□□ -0.54
MBD1-227ENST00000592060 PEMTQ9UBM1 199 aa11.67□□□□□ -0.54
MBD1-227ENST00000592060 ZNF469Q96JG9 3925 aaPredicted RBP11.66□□□□□ -0.54
MBD1-227ENST00000592060 IGHV1OR15-1A0A075B7D0 117 aa11.66□□□□□ -0.54
MBD1-227ENST00000592060 DLEU1O43261 78 aa11.66□□□□□ -0.54
MBD1-227ENST00000592060 NUDT3O95989 172 aa11.66□□□□□ -0.54
MBD1-227ENST00000592060 PPP1R17O96001 155 aa11.66□□□□□ -0.54
MBD1-227ENST00000592060 BOD1L2Q8IYS8 172 aa11.66□□□□□ -0.54
MBD1-227ENST00000592060 Q8N1Y9 231 aa11.66□□□□□ -0.54
MBD1-227ENST00000592060 TEP1Q99973 2627 aaKnown RBP11.66□□□□□ -0.54
MBD1-227ENST00000592060 ITPR3Q14573 2671 aa11.66□□□□□ -0.54
MBD1-227ENST00000592060 GAGE1Q13065 139 aa11.65□□□□□ -0.54
MBD1-227ENST00000592060 KLHL30-AS1Q8NEE0 82 aa11.65□□□□□ -0.54
MBD1-227ENST00000592060 MDFICQ9P1T7 246 aa11.65□□□□□ -0.54
MBD1-227ENST00000592060 HHLA3Q9XRX5 114 aa11.65□□□□□ -0.54
MBD1-227ENST00000592060 RPL32P62910 135 aaKnown RBP11.65□□□□□ -0.55
MBD1-227ENST00000592060 KHDC1LQ5JSQ8 128 aa11.65□□□□□ -0.55
MBD1-227ENST00000592060 SUMO4Q6EEV6 95 aa11.65□□□□□ -0.55
MBD1-227ENST00000592060 DLX4Q92988 240 aaPredicted RBP11.65□□□□□ -0.55
MBD1-227ENST00000592060 TOMM6Q96B49 74 aa11.65□□□□□ -0.55
MBD1-227ENST00000592060 ESM1Q9NQ30 184 aa11.65□□□□□ -0.55
MBD1-227ENST00000592060 KNCNA6PVL3 124 aa11.64□□□□□ -0.55
MBD1-227ENST00000592060 IGKCP01834 107 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms