RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 CSN3P07498 182 aa8.52□□□□□ -1.05
TPM4-213ENST00000591226 HOXD3P31249 432 aaPredicted RBP8.52□□□□□ -1.05
TPM4-213ENST00000591226 LINC00528Q8N1L1 170 aa8.52□□□□□ -1.05
TPM4-213ENST00000591226 DCANP1Q8TF63 244 aa8.52□□□□□ -1.05
TPM4-213ENST00000591226 NF1P21359 2839 aa8.52□□□□□ -1.05
TPM4-213ENST00000591226 TRAV9-2A0A087WT02 112 aa8.51□□□□□ -1.05
TPM4-213ENST00000591226 KRTAP1-1Q07627 177 aa8.51□□□□□ -1.05
TPM4-213ENST00000591226 DEFB136Q30KP8 78 aa8.51□□□□□ -1.05
TPM4-213ENST00000591226 CNFNQ9BYD5 112 aa8.51□□□□□ -1.05
TPM4-213ENST00000591226 D6R8Y8 96 aa8.51□□□□□ -1.05
TPM4-213ENST00000591226 TMEM86BQ8N661 226 aa8.51□□□□□ -1.05
TPM4-213ENST00000591226 TEX29Q8N6K0 151 aa8.51□□□□□ -1.05
TPM4-213ENST00000591226 CHCHD1Q96BP2 118 aaKnown RBP8.51□□□□□ -1.05
TPM4-213ENST00000591226 IGHV1-24A0A0C4DH33 117 aa8.5□□□□□ -1.05
TPM4-213ENST00000591226 DNAJC9-AS1A6NH13 148 aa8.5□□□□□ -1.05
TPM4-213ENST00000591226 MRPL51Q4U2R6 128 aaKnown RBP8.5□□□□□ -1.05
TPM4-213ENST00000591226 UFSP1Q6NVU6 142 aa8.5□□□□□ -1.05
TPM4-213ENST00000591226 NEGR1Q7Z3B1 354 aa8.5□□□□□ -1.05
TPM4-213ENST00000591226 NAA38Q9BRA0 125 aaKnown RBP8.5□□□□□ -1.05
TPM4-213ENST00000591226 MS4A6AQ9H2W1 248 aa8.5□□□□□ -1.05
TPM4-213ENST00000591226 AP5S1Q9NUS5 200 aa8.5□□□□□ -1.05
TPM4-213ENST00000591226 SS18L2Q9UHA2 77 aa8.5□□□□□ -1.05
TPM4-213ENST00000591226 FASNP49327 2511 aaKnown RBP8.5□□□□□ -1.05
TPM4-213ENST00000591226 HECTD1Q9ULT8 2610 aa8.5□□□□□ -1.05
TPM4-213ENST00000591226 LGALS9O00182 355 aa8.5□□□□□ -1.05
TPM4-213ENST00000591226 ID1P41134 155 aa8.5□□□□□ -1.05
TPM4-213ENST00000591226 FAM19A4Q96LR4 140 aa8.5□□□□□ -1.05
TPM4-213ENST00000591226 RPL24P83731 157 aaKnown RBP8.49□□□□□ -1.05
TPM4-213ENST00000591226 KIR3DS1Q14943 382 aa8.49□□□□□ -1.05
TPM4-213ENST00000591226 HIST2H2BDQ6DRA6 164 aa8.49□□□□□ -1.05
TPM4-213ENST00000591226 OR10AG1Q8NH19 301 aa8.49□□□□□ -1.05
TPM4-213ENST00000591226 FOXC2Q99958 501 aa8.49□□□□□ -1.05
TPM4-213ENST00000591226 U3KQK5 164 aa8.49□□□□□ -1.05
TPM4-213ENST00000591226 MTORP42345 2549 aa8.49□□□□□ -1.05
TPM4-213ENST00000591226 C2orf70A6NJV1 201 aa8.49□□□□□ -1.05
TPM4-213ENST00000591226 SMKR1H3BMG3 65 aa8.49□□□□□ -1.05
TPM4-213ENST00000591226 ZNF688P0C7X2 276 aa8.49□□□□□ -1.05
TPM4-213ENST00000591226 SLURP1P55000 103 aa8.49□□□□□ -1.05
TPM4-213ENST00000591226 TCTEX1D4Q5JR98 221 aa8.49□□□□□ -1.05
TPM4-213ENST00000591226 DGAT2L7PQ6IED9 249 aa8.49□□□□□ -1.05
TPM4-213ENST00000591226 EBLN2Q6P2I7 272 aa8.49□□□□□ -1.05
TPM4-213ENST00000591226 Q6ZSV7 163 aa8.49□□□□□ -1.05
TPM4-213ENST00000591226 ORMDL3Q8N138 153 aa8.49□□□□□ -1.05
TPM4-213ENST00000591226 PRELID3AQ96N28 172 aa8.49□□□□□ -1.05
TPM4-213ENST00000591226 TMEM191AQ9H0A3 160 aa8.49□□□□□ -1.05
TPM4-213ENST00000591226 GEMIN7Q9H840 131 aaKnown RBP8.49□□□□□ -1.05
TPM4-213ENST00000591226 C7orf71A4D174 169 aa8.48□□□□□ -1.05
TPM4-213ENST00000591226 CD5LO43866 347 aa8.48□□□□□ -1.05
TPM4-213ENST00000591226 NCR2O95944 276 aa8.48□□□□□ -1.05
TPM4-213ENST00000591226 RNASE4P34096 147 aaKnown RBP8.48□□□□□ -1.05
TPM4-213ENST00000591226 TIRAPP58753 221 aa8.48□□□□□ -1.05
TPM4-213ENST00000591226 ESM1Q9NQ30 184 aa8.48□□□□□ -1.05
TPM4-213ENST00000591226 YAE1D1Q9NRH1 226 aa8.48□□□□□ -1.05
TPM4-213ENST00000591226 TRAV21A0A0B4J279 112 aa8.48□□□□□ -1.05
TPM4-213ENST00000591226 HERV-K104P63124 156 aa8.48□□□□□ -1.05
TPM4-213ENST00000591226 PSMG4Q5JS54 123 aa8.48□□□□□ -1.05
TPM4-213ENST00000591226 GTF2H5Q6ZYL4 71 aa8.48□□□□□ -1.05
TPM4-213ENST00000591226 RNF185Q96GF1 192 aa8.48□□□□□ -1.05
TPM4-213ENST00000591226 H3BVH4 76 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 HSD52Q0P140 79 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 DUX3Q96PT4 197 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 JMJD8Q96S16 334 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 TSSC4Q9Y5U2 329 aaPredicted RBP8.47□□□□□ -1.05
TPM4-213ENST00000591226 LOC389332A0A1B0GUA5 103 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 TEX48A0A1B0GUV7 120 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 K7EQG2 157 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 CKS2P33552 79 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 C12orf54Q6X4T0 127 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 ADAMTSL5Q6ZMM2 481 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 LINC00173Q6ZV60 143 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 APRG1Q8IVJ8 170 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 PRSS3P2Q8NHM4 247 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 TIMM8BQ9Y5J9 83 aaPredicted RBP8.47□□□□□ -1.05
TPM4-213ENST00000591226 CUBNO60494 3623 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 ANK3Q12955 4377 aaKnown RBP8.47□□□□□ -1.05
TPM4-213ENST00000591226 PRSS29PA6NIE9 313 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 OR5AL1P0C617 328 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 IFI27P40305 119 aaPredicted RBP8.47□□□□□ -1.05
TPM4-213ENST00000591226 FA2HQ7L5A8 372 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 SIGLEC8Q9NYZ4 499 aa8.47□□□□□ -1.05
TPM4-213ENST00000591226 TRBV7-9A0A0J9YWB2 115 aa8.46□□□□□ -1.06
TPM4-213ENST00000591226 SNAI2O43623 268 aa8.46□□□□□ -1.06
TPM4-213ENST00000591226 GAS8-AS1O95177 125 aa8.46□□□□□ -1.06
TPM4-213ENST00000591226 NPYP01303 97 aa8.46□□□□□ -1.06
TPM4-213ENST00000591226 ANXA2RQ3ZCQ2 193 aa8.46□□□□□ -1.06
TPM4-213ENST00000591226 OR11H1Q8NG94 326 aa8.46□□□□□ -1.06
TPM4-213ENST00000591226 C4orf3Q8WVX3 66 aa8.46□□□□□ -1.06
TPM4-213ENST00000591226 GAGE12HA6NDE8 117 aa8.46□□□□□ -1.06
TPM4-213ENST00000591226 LINC01619G3V211 115 aa8.46□□□□□ -1.06
TPM4-213ENST00000591226 LEPROTL1O95214 131 aa8.46□□□□□ -1.06
TPM4-213ENST00000591226 EVI2AP22794 236 aa8.46□□□□□ -1.06
TPM4-213ENST00000591226 SNRPD3P62318 126 aaKnown RBP8.46□□□□□ -1.06
TPM4-213ENST00000591226 SPATA12Q7Z6I5 190 aa8.46□□□□□ -1.06
TPM4-213ENST00000591226 SETD2Q9BYW2 2564 aaPredicted RBP8.45□□□□□ -1.06
TPM4-213ENST00000591226 SPRY2O43597 315 aa8.45□□□□□ -1.06
TPM4-213ENST00000591226 SPANXN1Q5VSR9 72 aa8.45□□□□□ -1.06
TPM4-213ENST00000591226 KLHL30-AS1Q8NEE0 82 aa8.45□□□□□ -1.06
TPM4-213ENST00000591226 AP1S3Q96PC3 154 aa8.45□□□□□ -1.06
TPM4-213ENST00000591226 SORL1Q92673 2214 aa8.45□□□□□ -1.06
TPM4-213ENST00000591226 hDV102S1A0JD36 115 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms