RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 MUC4Q99102 2169 aa13.53□□□□□ -0.24
DDX39A-214ENST00000590556 TENM2Q9NT68 2774 aa13.52□□□□□ -0.24
DDX39A-214ENST00000590556 PTH2Q96A98 100 aa13.52□□□□□ -0.25
DDX39A-214ENST00000590556 RNASE7Q9H1E1 156 aaKnown RBP13.52□□□□□ -0.25
DDX39A-214ENST00000590556 XKRY2A2RUG3 117 aa13.51□□□□□ -0.25
DDX39A-214ENST00000590556 IGLL5B9A064 214 aa13.51□□□□□ -0.25
DDX39A-214ENST00000590556 SFTA3P0C7M3 94 aa13.51□□□□□ -0.25
DDX39A-214ENST00000590556 NAT8Q9UHE5 227 aa13.51□□□□□ -0.25
DDX39A-214ENST00000590556 PHLDA3Q9Y5J5 127 aa13.51□□□□□ -0.25
DDX39A-214ENST00000590556 MED14OSP0DP75 135 aa13.5□□□□□ -0.25
DDX39A-214ENST00000590556 ERVFC1-1P60608 527 aa13.5□□□□□ -0.25
DDX39A-214ENST00000590556 RPP21Q9H633 154 aaKnown RBP13.5□□□□□ -0.25
DDX39A-214ENST00000590556 SCRT2Q9NQ03 307 aa13.5□□□□□ -0.25
DDX39A-214ENST00000590556 DYNC2H1Q8NCM8 4307 aaKnown RBP13.5□□□□□ -0.25
DDX39A-214ENST00000590556 IGHV3-53P01767 116 aa13.49□□□□□ -0.25
DDX39A-214ENST00000590556 GZMBP10144 247 aa13.49□□□□□ -0.25
DDX39A-214ENST00000590556 UQCC3Q6UW78 93 aa13.49□□□□□ -0.25
DDX39A-214ENST00000590556 FAM231DQ6ZW35 169 aa13.49□□□□□ -0.25
DDX39A-214ENST00000590556 SYT8Q8NBV8 401 aa13.49□□□□□ -0.25
DDX39A-214ENST00000590556 NDUFAF3Q9BU61 184 aa13.49□□□□□ -0.25
DDX39A-214ENST00000590556 STARD9Q9P2P6 4700 aa13.49□□□□□ -0.25
DDX39A-214ENST00000590556 GATCO43716 136 aaKnown RBP13.48□□□□□ -0.25
DDX39A-214ENST00000590556 HOXA5P20719 270 aa13.48□□□□□ -0.25
DDX39A-214ENST00000590556 RPL23P62829 140 aaKnown RBP13.48□□□□□ -0.25
DDX39A-214ENST00000590556 ADIRFQ15847 76 aa13.48□□□□□ -0.25
DDX39A-214ENST00000590556 COMMD7Q86VX2 200 aa13.48□□□□□ -0.25
DDX39A-214ENST00000590556 OR4C5Q8NGB2 326 aa13.48□□□□□ -0.25
DDX39A-214ENST00000590556 FAM210BQ96KR6 192 aa13.48□□□□□ -0.25
DDX39A-214ENST00000590556 IGHV4-4A0A075B6R2 117 aa13.47□□□□□ -0.25
DDX39A-214ENST00000590556 TRAV4A0A0B4J268 109 aa13.47□□□□□ -0.25
DDX39A-214ENST00000590556 LINC00862A6NCI5 91 aa13.47□□□□□ -0.25
DDX39A-214ENST00000590556 PIK3CD-AS1Q5SR53 167 aa13.47□□□□□ -0.25
DDX39A-214ENST00000590556 DMRTA1Q5VZB9 504 aa13.47□□□□□ -0.25
DDX39A-214ENST00000590556 TMEM88Q6PEY1 159 aa13.47□□□□□ -0.25
DDX39A-214ENST00000590556 ZFP82Q8N141 532 aa13.47□□□□□ -0.25
DDX39A-214ENST00000590556 POM121L12Q8N7R1 296 aa13.47□□□□□ -0.25
DDX39A-214ENST00000590556 ZNF479Q96JC4 524 aa13.47□□□□□ -0.25
DDX39A-214ENST00000590556 TPPP3Q9BW30 176 aa13.47□□□□□ -0.25
DDX39A-214ENST00000590556 SSBP4Q9BWG4 385 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-214ENST00000590556 M0R381 172 aa13.46□□□□□ -0.25
DDX39A-214ENST00000590556 SNAI2O43623 268 aa13.46□□□□□ -0.25
DDX39A-214ENST00000590556 OR5AL1P0C617 328 aa13.46□□□□□ -0.25
DDX39A-214ENST00000590556 FER1L6-AS1Q8NA97 138 aa13.46□□□□□ -0.25
DDX39A-214ENST00000590556 ISOC2Q96AB3 205 aa13.46□□□□□ -0.25
DDX39A-214ENST00000590556 OSTCQ9NRP0 149 aa13.46□□□□□ -0.25
DDX39A-214ENST00000590556 RS1O15537 224 aa13.45□□□□□ -0.26
DDX39A-214ENST00000590556 IGLC6P0CF74 106 aa13.45□□□□□ -0.26
DDX39A-214ENST00000590556 TCTAP57738 103 aa13.45□□□□□ -0.26
DDX39A-214ENST00000590556 CFAP126Q5VTH2 177 aa13.45□□□□□ -0.26
DDX39A-214ENST00000590556 C15orf54Q8N8G6 183 aa13.45□□□□□ -0.26
DDX39A-214ENST00000590556 OR10AG1Q8NH19 301 aa13.45□□□□□ -0.26
DDX39A-214ENST00000590556 TRGV4A0A0C4DH28 118 aa13.44□□□□□ -0.26
DDX39A-214ENST00000590556 MUC21A0A0G2JKD1 596 aa13.44□□□□□ -0.26
DDX39A-214ENST00000590556 MUC21A0A140T8X8 626 aa13.44□□□□□ -0.26
DDX39A-214ENST00000590556 A0A1W2PPQ1 181 aa13.44□□□□□ -0.26
DDX39A-214ENST00000590556 A8MWV9 139 aa13.44□□□□□ -0.26
DDX39A-214ENST00000590556 FHL2Q14192 279 aa13.44□□□□□ -0.26
DDX39A-214ENST00000590556 SFRP2Q96HF1 295 aa13.44□□□□□ -0.26
DDX39A-214ENST00000590556 APLNQ9ULZ1 77 aa13.44□□□□□ -0.26
DDX39A-214ENST00000590556 NACAE9PAV3 2078 aa13.43□□□□□ -0.26
DDX39A-214ENST00000590556 TRAV26-1A0A087WT03 109 aa13.43□□□□□ -0.26
DDX39A-214ENST00000590556 A8MWL6 223 aa13.43□□□□□ -0.26
DDX39A-214ENST00000590556 SSTP61278 116 aa13.43□□□□□ -0.26
DDX39A-214ENST00000590556 SLAQ13239 276 aa13.43□□□□□ -0.26
DDX39A-214ENST00000590556 CT83Q5H943 113 aa13.43□□□□□ -0.26
DDX39A-214ENST00000590556 SPANXN1Q5VSR9 72 aa13.43□□□□□ -0.26
DDX39A-214ENST00000590556 A0A0J9YY99 117 aa13.42□□□□□ -0.26
DDX39A-214ENST00000590556 TMEM218A2RU14 115 aa13.42□□□□□ -0.26
DDX39A-214ENST00000590556 F2Z2F3 143 aa13.42□□□□□ -0.26
DDX39A-214ENST00000590556 CIDEAO60543 219 aa13.42□□□□□ -0.26
DDX39A-214ENST00000590556 NXPH4O95158 308 aa13.42□□□□□ -0.26
DDX39A-214ENST00000590556 LYZL1Q6UWQ5 148 aa13.42□□□□□ -0.26
DDX39A-214ENST00000590556 OR10G8Q8NGN5 311 aa13.42□□□□□ -0.26
DDX39A-214ENST00000590556 JPT2Q9H910 190 aa13.42□□□□□ -0.26
DDX39A-214ENST00000590556 HHLA3Q9XRX5 114 aa13.42□□□□□ -0.26
DDX39A-214ENST00000590556 CACNG7P62955 275 aa13.41□□□□□ -0.26
DDX39A-214ENST00000590556 C15orf53Q8NAA6 179 aa13.41□□□□□ -0.26
DDX39A-214ENST00000590556 PRO0255Q9UI72 69 aa13.41□□□□□ -0.26
DDX39A-214ENST00000590556 IGHV3-73A0A0B4J1V6 119 aa13.4□□□□□ -0.26
DDX39A-214ENST00000590556 PAX4O43316 350 aa13.4□□□□□ -0.26
DDX39A-214ENST00000590556 GTSF1Q8WW33 167 aa13.4□□□□□ -0.26
DDX39A-214ENST00000590556 V9GYV3 84 aa13.4□□□□□ -0.26
DDX39A-214ENST00000590556 F8W036 122 aa13.39□□□□□ -0.27
DDX39A-214ENST00000590556 H3BNG1 76 aa13.39□□□□□ -0.27
DDX39A-214ENST00000590556 NUDT3O95989 172 aa13.39□□□□□ -0.27
DDX39A-214ENST00000590556 CTRLP40313 264 aa13.39□□□□□ -0.27
DDX39A-214ENST00000590556 CRYBA4P53673 196 aa13.39□□□□□ -0.27
DDX39A-214ENST00000590556 PNRC1Q12796 327 aaPredicted RBP13.39□□□□□ -0.27
DDX39A-214ENST00000590556 ZFP2Q6ZN57 461 aa13.39□□□□□ -0.27
DDX39A-214ENST00000590556 TSKUQ8WUA8 353 aa13.39□□□□□ -0.27
DDX39A-214ENST00000590556 VSIG2Q96IQ7 327 aa13.39□□□□□ -0.27
DDX39A-214ENST00000590556 SAMD10Q9BYL1 202 aa13.39□□□□□ -0.27
DDX39A-214ENST00000590556 A0A087WWL8 130 aa13.38□□□□□ -0.27
DDX39A-214ENST00000590556 RHODO00212 210 aa13.38□□□□□ -0.27
DDX39A-214ENST00000590556 GATA1P15976 413 aaPredicted RBP13.38□□□□□ -0.27
DDX39A-214ENST00000590556 WDR73Q6P4I2 378 aa13.38□□□□□ -0.27
DDX39A-214ENST00000590556 GFRA4Q9GZZ7 299 aa13.38□□□□□ -0.27
DDX39A-214ENST00000590556 PLECQ15149 4684 aaKnown RBP13.37□□□□□ -0.27
DDX39A-214ENST00000590556 CRYGDP07320 174 aa13.37□□□□□ -0.27
DDX39A-214ENST00000590556 ADCYAP1P18509 176 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms