RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 SH2D6Q7Z4S9 175 aa11.64□□□□□ -0.55
RETREG3-210ENST00000590541 WFDC10BQ8IUB3 73 aa11.64□□□□□ -0.55
RETREG3-210ENST00000590541 LRCOL1A6NCL2 159 aa11.63□□□□□ -0.55
RETREG3-210ENST00000590541 K7EP13 123 aa11.63□□□□□ -0.55
RETREG3-210ENST00000590541 GCGP01275 180 aa11.63□□□□□ -0.55
RETREG3-210ENST00000590541 SFTA3P0C7M3 94 aa11.63□□□□□ -0.55
RETREG3-210ENST00000590541 ZNF345Q14585 488 aa11.63□□□□□ -0.55
RETREG3-210ENST00000590541 ZNF726P1Q15940 193 aa11.63□□□□□ -0.55
RETREG3-210ENST00000590541 PRNTQ86SH4 94 aa11.63□□□□□ -0.55
RETREG3-210ENST00000590541 SYT8Q8NBV8 401 aa11.63□□□□□ -0.55
RETREG3-210ENST00000590541 NTN5Q8WTR8 489 aaPredicted RBP11.63□□□□□ -0.55
RETREG3-210ENST00000590541 HIST1H2BAQ96A08 127 aa11.63□□□□□ -0.55
RETREG3-210ENST00000590541 PTH2Q96A98 100 aa11.63□□□□□ -0.55
RETREG3-210ENST00000590541 SGK494Q96LW2 274 aa11.63□□□□□ -0.55
RETREG3-210ENST00000590541 TXNDC17Q9BRA2 123 aa11.63□□□□□ -0.55
RETREG3-210ENST00000590541 K7EQD1 137 aa11.62□□□□□ -0.55
RETREG3-210ENST00000590541 IFNA7P01567 189 aa11.62□□□□□ -0.55
RETREG3-210ENST00000590541 PLA2G1BP04054 148 aaKnown RBP11.62□□□□□ -0.55
RETREG3-210ENST00000590541 STOML3Q8TAV4 291 aa11.62□□□□□ -0.55
RETREG3-210ENST00000590541 TCEAL7Q9BRU2 100 aa11.62□□□□□ -0.55
RETREG3-210ENST00000590541 GYPEP15421 78 aa11.61□□□□□ -0.55
RETREG3-210ENST00000590541 EVI2AP22794 236 aa11.61□□□□□ -0.55
RETREG3-210ENST00000590541 ZNF80P51504 273 aaPredicted RBP11.61□□□□□ -0.55
RETREG3-210ENST00000590541 DEFB104AQ8WTQ1 72 aa11.61□□□□□ -0.55
RETREG3-210ENST00000590541 CYTL1Q9NRR1 136 aa11.61□□□□□ -0.55
RETREG3-210ENST00000590541 BOLA1Q9Y3E2 137 aa11.61□□□□□ -0.55
RETREG3-210ENST00000590541 FAM74A7A6NL05 159 aa11.6□□□□□ -0.55
RETREG3-210ENST00000590541 ZNF876PQ49A33 203 aa11.6□□□□□ -0.55
RETREG3-210ENST00000590541 KCNRGQ8N5I3 272 aa11.6□□□□□ -0.55
RETREG3-210ENST00000590541 ARL2-SNX15V9GYD0 113 aa11.6□□□□□ -0.55
RETREG3-210ENST00000590541 MAP1LC3B2A6NCE7 125 aa11.59□□□□□ -0.55
RETREG3-210ENST00000590541 HMSDA8MTL9 139 aa11.59□□□□□ -0.55
RETREG3-210ENST00000590541 FABP5P3A8MUU1 101 aa11.59□□□□□ -0.55
RETREG3-210ENST00000590541 PEX7O00628 323 aa11.59□□□□□ -0.55
RETREG3-210ENST00000590541 FHITP49789 147 aa11.59□□□□□ -0.55
RETREG3-210ENST00000590541 PIK3CD-AS1Q5SR53 167 aa11.59□□□□□ -0.55
RETREG3-210ENST00000590541 C9orf85Q96MD7 179 aa11.59□□□□□ -0.55
RETREG3-210ENST00000590541 MAP1LC3BQ9GZQ8 125 aa11.59□□□□□ -0.55
RETREG3-210ENST00000590541 C11orf21Q9P2W6 132 aa11.59□□□□□ -0.55
RETREG3-210ENST00000590541 ZFP30Q9Y2G7 519 aa11.59□□□□□ -0.55
RETREG3-210ENST00000590541 FAT3Q8TDW7 4589 aa11.59□□□□□ -0.55
RETREG3-210ENST00000590541 A0A0D9SG52 128 aa11.58□□□□□ -0.56
RETREG3-210ENST00000590541 UMAD1C9J7I0 102 aa11.58□□□□□ -0.56
RETREG3-210ENST00000590541 CRYGDP07320 174 aa11.58□□□□□ -0.56
RETREG3-210ENST00000590541 SEC11BP0C7V7 166 aa11.58□□□□□ -0.56
RETREG3-210ENST00000590541 GATA1P15976 413 aaPredicted RBP11.58□□□□□ -0.56
RETREG3-210ENST00000590541 FGF8P55075 233 aaPredicted RBP11.58□□□□□ -0.56
RETREG3-210ENST00000590541 TIRAPP58753 221 aa11.58□□□□□ -0.56
RETREG3-210ENST00000590541 UBE2G2P60604 165 aa11.58□□□□□ -0.56
RETREG3-210ENST00000590541 LINC00528Q8N1L1 170 aa11.58□□□□□ -0.56
RETREG3-210ENST00000590541 Q8N814 137 aa11.58□□□□□ -0.56
RETREG3-210ENST00000590541 TRBV6-4A0A1B0GX49 114 aa11.57□□□□□ -0.56
RETREG3-210ENST00000590541 RS1O15537 224 aa11.57□□□□□ -0.56
RETREG3-210ENST00000590541 C1QBP02746 253 aa11.57□□□□□ -0.56
RETREG3-210ENST00000590541 EIF5AP63241 154 aaKnown RBP11.57□□□□□ -0.56
RETREG3-210ENST00000590541 COX8CQ7Z4L0 72 aa11.57□□□□□ -0.56
RETREG3-210ENST00000590541 FMC1Q96HJ9 113 aa11.57□□□□□ -0.56
RETREG3-210ENST00000590541 LINC00479Q96M42 142 aa11.57□□□□□ -0.56
RETREG3-210ENST00000590541 PRADC1Q9BSG0 188 aa11.57□□□□□ -0.56
RETREG3-210ENST00000590541 TRAV34A0A0B4J273 112 aa11.56□□□□□ -0.56
RETREG3-210ENST00000590541 PSCAO43653 123 aa11.56□□□□□ -0.56
RETREG3-210ENST00000590541 RNASE3P12724 160 aaKnown RBP11.56□□□□□ -0.56
RETREG3-210ENST00000590541 S100A4P26447 101 aaKnown RBP11.56□□□□□ -0.56
RETREG3-210ENST00000590541 CFAP126Q5VTH2 177 aa11.56□□□□□ -0.56
RETREG3-210ENST00000590541 Q86TA4 180 aa11.56□□□□□ -0.56
RETREG3-210ENST00000590541 C10orf126Q8N4M7 172 aa11.56□□□□□ -0.56
RETREG3-210ENST00000590541 PLA2G2DQ9UNK4 145 aa11.56□□□□□ -0.56
RETREG3-210ENST00000590541 TRBV6-1A0A0K0K1D8 114 aa11.55□□□□□ -0.56
RETREG3-210ENST00000590541 KANTRA0A1W2PQU2 76 aa11.55□□□□□ -0.56
RETREG3-210ENST00000590541 MGST1P10620 155 aaKnown RBP11.55□□□□□ -0.56
RETREG3-210ENST00000590541 UBE2G1P62253 170 aa11.55□□□□□ -0.56
RETREG3-210ENST00000590541 RHOHQ15669 191 aa11.55□□□□□ -0.56
RETREG3-210ENST00000590541 ZNF506Q5JVG8 444 aa11.55□□□□□ -0.56
RETREG3-210ENST00000590541 DPPA3Q6W0C5 159 aa11.55□□□□□ -0.56
RETREG3-210ENST00000590541 Q6ZSA8 131 aa11.55□□□□□ -0.56
RETREG3-210ENST00000590541 A8MWV9 139 aa11.54□□□□□ -0.56
RETREG3-210ENST00000590541 SMLR1H3BR10 107 aa11.54□□□□□ -0.56
RETREG3-210ENST00000590541 ASIPP42127 132 aa11.54□□□□□ -0.56
RETREG3-210ENST00000590541 DNLZQ5SXM8 178 aa11.54□□□□□ -0.56
RETREG3-210ENST00000590541 SLC25A29Q8N8R3 303 aa11.54□□□□□ -0.56
RETREG3-210ENST00000590541 NHLRC2Q8NBF2 726 aa11.54□□□□□ -0.56
RETREG3-210ENST00000590541 IL36BQ9NZH7 164 aa11.54□□□□□ -0.56
RETREG3-210ENST00000590541 IGKV3D-20A0A0C4DH25 116 aa11.53□□□□□ -0.56
RETREG3-210ENST00000590541 PGPEP1LA6NFU8 196 aa11.53□□□□□ -0.56
RETREG3-210ENST00000590541 S100A9P06702 114 aaKnown RBP11.53□□□□□ -0.56
RETREG3-210ENST00000590541 CST9LP1Q5W188 147 aa11.53□□□□□ -0.56
RETREG3-210ENST00000590541 ZFP2Q6ZN57 461 aa11.53□□□□□ -0.56
RETREG3-210ENST00000590541 MBD3L1Q8WWY6 194 aa11.53□□□□□ -0.56
RETREG3-210ENST00000590541 B4DEV8 164 aa11.52□□□□□ -0.57
RETREG3-210ENST00000590541 BCL2L11O43521 198 aa11.52□□□□□ -0.57
RETREG3-210ENST00000590541 LGALSLQ3ZCW2 172 aaPredicted RBP11.52□□□□□ -0.57
RETREG3-210ENST00000590541 FAM162BQ5T6X4 162 aa11.52□□□□□ -0.57
RETREG3-210ENST00000590541 OR11H4Q8NGC9 324 aa11.52□□□□□ -0.57
RETREG3-210ENST00000590541 ZNF471Q9BX82 626 aaPredicted RBP11.52□□□□□ -0.57
RETREG3-210ENST00000590541 LTAP01374 205 aa11.51□□□□□ -0.57
RETREG3-210ENST00000590541 KRTAP10-4P60372 401 aaPredicted RBP11.51□□□□□ -0.57
RETREG3-210ENST00000590541 SFT2D1Q8WV19 159 aa11.51□□□□□ -0.57
RETREG3-210ENST00000590541 ZC2HC1AQ96GY0 325 aa11.51□□□□□ -0.57
RETREG3-210ENST00000590541 TRAV8-6A0A0B4J262 113 aa11.5□□□□□ -0.57
RETREG3-210ENST00000590541 LOC100131303A0A0U1RQF7 123 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms