RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ZNF22P17026 224 aaPredicted RBP11.64□□□□□ -0.55
CIRBP-228ENST00000590347 CSDC2Q9Y534 153 aaKnown RBP11.64□□□□□ -0.55
CIRBP-228ENST00000590347 LYRM7Q5U5X0 104 aa11.64□□□□□ -0.55
CIRBP-228ENST00000590347 C2orf66Q6UXQ4 117 aa11.64□□□□□ -0.55
CIRBP-228ENST00000590347 Q6ZS92 163 aa11.64□□□□□ -0.55
CIRBP-228ENST00000590347 FAM27E3Q08E93 113 aa11.64□□□□□ -0.55
CIRBP-228ENST00000590347 FAM236AA0A1B0GUQ0 79 aa11.63□□□□□ -0.55
CIRBP-228ENST00000590347 FAM236BA0A1B0GV22 79 aa11.63□□□□□ -0.55
CIRBP-228ENST00000590347 MZT1Q08AG7 82 aa11.63□□□□□ -0.55
CIRBP-228ENST00000590347 INS-IGF2F8WCM5 200 aa11.63□□□□□ -0.55
CIRBP-228ENST00000590347 HERVK_113P61574 105 aa11.63□□□□□ -0.55
CIRBP-228ENST00000590347 NEXN-AS1Q8NBZ9 246 aa11.63□□□□□ -0.55
CIRBP-228ENST00000590347 TRBV6-1A0A0K0K1D8 114 aa11.62□□□□□ -0.55
CIRBP-228ENST00000590347 DEFB1P60022 68 aa11.62□□□□□ -0.55
CIRBP-228ENST00000590347 PSMG4Q5JS54 123 aa11.62□□□□□ -0.55
CIRBP-228ENST00000590347 GFRALQ6UXV0 394 aa11.62□□□□□ -0.55
CIRBP-228ENST00000590347 LINC01587Q99440 93 aa11.62□□□□□ -0.55
CIRBP-228ENST00000590347 RS1O15537 224 aa11.62□□□□□ -0.55
CIRBP-228ENST00000590347 IGHV3-30P01768 117 aa11.62□□□□□ -0.55
CIRBP-228ENST00000590347 IGHG4P01861 327 aa11.62□□□□□ -0.55
CIRBP-228ENST00000590347 IGHV3-30-5P0DP03 117 aa11.62□□□□□ -0.55
CIRBP-228ENST00000590347 RPL39P62891 51 aaKnown RBP11.62□□□□□ -0.55
CIRBP-228ENST00000590347 ZNF474Q6S9Z5 364 aaPredicted RBP11.62□□□□□ -0.55
CIRBP-228ENST00000590347 SBSPONQ8IVN8 264 aa11.62□□□□□ -0.55
CIRBP-228ENST00000590347 COX6B1P14854 86 aa11.62□□□□□ -0.55
CIRBP-228ENST00000590347 IGFL2Q6UWQ7 119 aa11.62□□□□□ -0.55
CIRBP-228ENST00000590347 SMIM2Q9BVW6 85 aa11.62□□□□□ -0.55
CIRBP-228ENST00000590347 ZNF580Q9UK33 172 aa11.62□□□□□ -0.55
CIRBP-228ENST00000590347 FAM215AQ9Y5M1 114 aa11.62□□□□□ -0.55
CIRBP-228ENST00000590347 MAP1AP78559 2803 aaPredicted RBP11.61□□□□□ -0.55
CIRBP-228ENST00000590347 PRR30Q53SZ7 412 aaPredicted RBP11.61□□□□□ -0.55
CIRBP-228ENST00000590347 OR10J6PQ8NGY7 276 aa11.61□□□□□ -0.55
CIRBP-228ENST00000590347 EDA2RQ9HAV5 297 aa11.61□□□□□ -0.55
CIRBP-228ENST00000590347 TRGV11A0A075B6L2 103 aa11.61□□□□□ -0.55
CIRBP-228ENST00000590347 IGF1P05019 195 aa11.61□□□□□ -0.55
CIRBP-228ENST00000590347 EEF1AKMT3Q96AZ1 226 aa11.61□□□□□ -0.55
CIRBP-228ENST00000590347 RAB1BQ9H0U4 201 aa11.61□□□□□ -0.55
CIRBP-228ENST00000590347 ASIPP42127 132 aa11.6□□□□□ -0.55
CIRBP-228ENST00000590347 ADIPOQQ15848 244 aa11.6□□□□□ -0.55
CIRBP-228ENST00000590347 LINC01620Q4KN68 170 aa11.6□□□□□ -0.55
CIRBP-228ENST00000590347 OPRPNQ99935 248 aaPredicted RBP11.6□□□□□ -0.55
CIRBP-228ENST00000590347 UBTD1Q9HAC8 227 aa11.6□□□□□ -0.55
CIRBP-228ENST00000590347 CEACAM4O75871 244 aa11.6□□□□□ -0.55
CIRBP-228ENST00000590347 CLEC2BQ92478 149 aa11.6□□□□□ -0.55
CIRBP-228ENST00000590347 SMAD5-AS1Q9Y6J3 95 aa11.6□□□□□ -0.55
CIRBP-228ENST00000590347 C2orf82Q6UX34 121 aa11.6□□□□□ -0.55
CIRBP-228ENST00000590347 TIMM23O14925 209 aa11.59□□□□□ -0.55
CIRBP-228ENST00000590347 C9orf153Q5TBE3 101 aa11.59□□□□□ -0.55
CIRBP-228ENST00000590347 H3BMM0 161 aa11.59□□□□□ -0.55
CIRBP-228ENST00000590347 DLX6P56179 175 aa11.59□□□□□ -0.55
CIRBP-228ENST00000590347 UBE2WQ96B02 151 aa11.59□□□□□ -0.55
CIRBP-228ENST00000590347 LINC01546A6NGU7 62 aa11.58□□□□□ -0.56
CIRBP-228ENST00000590347 PRSS2P07478 247 aa11.58□□□□□ -0.56
CIRBP-228ENST00000590347 LYPD1Q8N2G4 141 aa11.58□□□□□ -0.56
CIRBP-228ENST00000590347 IGLV1-44P01699 117 aa11.58□□□□□ -0.56
CIRBP-228ENST00000590347 IGHV3-33P01772 117 aa11.58□□□□□ -0.56
CIRBP-228ENST00000590347 PF4V1P10720 104 aa11.58□□□□□ -0.56
CIRBP-228ENST00000590347 MUSTN1Q8IVN3 82 aa11.58□□□□□ -0.56
CIRBP-228ENST00000590347 PMVKQ15126 192 aa11.58□□□□□ -0.56
CIRBP-228ENST00000590347 TIMD4Q96H15 378 aa11.58□□□□□ -0.56
CIRBP-228ENST00000590347 DOPEY2Q9Y3R5 2298 aa11.57□□□□□ -0.56
CIRBP-228ENST00000590347 THBDP07204 575 aa11.57□□□□□ -0.56
CIRBP-228ENST00000590347 CRYGDP07320 174 aa11.57□□□□□ -0.56
CIRBP-228ENST00000590347 SUMO2P61956 95 aaKnown RBP11.57□□□□□ -0.56
CIRBP-228ENST00000590347 TRAV41A0A0B4J266 112 aa11.57□□□□□ -0.56
CIRBP-228ENST00000590347 SLC25A15Q9Y619 301 aa11.57□□□□□ -0.56
CIRBP-228ENST00000590347 TEX36Q5VZQ5 186 aa11.56□□□□□ -0.56
CIRBP-228ENST00000590347 MDFICQ9P1T7 246 aa11.56□□□□□ -0.56
CIRBP-228ENST00000590347 ZFHX3Q15911 3703 aa11.56□□□□□ -0.56
CIRBP-228ENST00000590347 TRAV12-3A0A0B4J271 114 aa11.55□□□□□ -0.56
CIRBP-228ENST00000590347 IGHV7-4-1A0A0J9YVY3 117 aa11.55□□□□□ -0.56
CIRBP-228ENST00000590347 TRIAP1O43715 76 aa11.55□□□□□ -0.56
CIRBP-228ENST00000590347 FAM19A5Q7Z5A7 132 aaPredicted RBP11.55□□□□□ -0.56
CIRBP-228ENST00000590347 AGPAT4-IT1Q9H0P7 198 aa11.55□□□□□ -0.56
CIRBP-228ENST00000590347 TP53TG1Q9Y2A0 90 aa11.55□□□□□ -0.56
CIRBP-228ENST00000590347 SORL1Q92673 2214 aa11.55□□□□□ -0.56
CIRBP-228ENST00000590347 TRAV12-1A0A0B4J245 112 aa11.55□□□□□ -0.56
CIRBP-228ENST00000590347 RBAKDNA6NC62 111 aa11.55□□□□□ -0.56
CIRBP-228ENST00000590347 HES1Q14469 280 aa11.55□□□□□ -0.56
CIRBP-228ENST00000590347 TOMM6Q96B49 74 aa11.55□□□□□ -0.56
CIRBP-228ENST00000590347 CELSR1Q9NYQ6 3014 aa11.55□□□□□ -0.56
CIRBP-228ENST00000590347 LYNX1G3V0Z9 82 aa11.55□□□□□ -0.56
CIRBP-228ENST00000590347 LYNX1P0DP58 116 aa11.55□□□□□ -0.56
CIRBP-228ENST00000590347 LINC01619G3V211 115 aa11.54□□□□□ -0.56
CIRBP-228ENST00000590347 LGALS9O00182 355 aa11.54□□□□□ -0.56
CIRBP-228ENST00000590347 HERVK_113P63121 156 aa11.54□□□□□ -0.56
CIRBP-228ENST00000590347 MSRB2Q9Y3D2 182 aa11.54□□□□□ -0.56
CIRBP-228ENST00000590347 IGLV4-69A0A075B6H9 119 aa11.54□□□□□ -0.56
CIRBP-228ENST00000590347 IGHV1-3A0A0C4DH29 117 aa11.54□□□□□ -0.56
CIRBP-228ENST00000590347 NDUFB3O43676 98 aa11.54□□□□□ -0.56
CIRBP-228ENST00000590347 TSHBP01222 138 aa11.54□□□□□ -0.56
CIRBP-228ENST00000590347 ZNRF2Q8NHG8 242 aa11.54□□□□□ -0.56
CIRBP-228ENST00000590347 CNFNQ9BYD5 112 aa11.54□□□□□ -0.56
CIRBP-228ENST00000590347 LINC00574Q9H8X3 128 aa11.54□□□□□ -0.56
CIRBP-228ENST00000590347 LGALS3P17931 250 aaKnown RBP11.53□□□□□ -0.56
CIRBP-228ENST00000590347 MBD3L4A6NDZ8 208 aaPredicted RBP11.53□□□□□ -0.56
CIRBP-228ENST00000590347 MBD3L3A6NE82 208 aaPredicted RBP11.53□□□□□ -0.56
CIRBP-228ENST00000590347 MBD3L5A6NJ08 208 aaPredicted RBP11.53□□□□□ -0.56
CIRBP-228ENST00000590347 IGHV1-8P0DP01 117 aa11.53□□□□□ -0.56
CIRBP-228ENST00000590347 NBL1P41271 181 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms