RNA–Protein interactions for RNA: ENST00000590278.1

LRP3-203, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 3,278 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-203ENST00000590278 SIGMAR1Q99720 223 aa11.19□□□□□ -0.62
LRP3-203ENST00000590278 HOXA3O43365 443 aaPredicted RBP11.18□□□□□ -0.62
LRP3-203ENST00000590278 IGKV3-20P01619 116 aa11.18□□□□□ -0.62
LRP3-203ENST00000590278 HLA-DRB4P13762 266 aa11.18□□□□□ -0.62
LRP3-203ENST00000590278 Q5PR19 223 aa11.18□□□□□ -0.62
LRP3-203ENST00000590278 C11orf71Q6IPW1 123 aa11.18□□□□□ -0.62
LRP3-203ENST00000590278 DPH3P1Q9H4G8 78 aa11.18□□□□□ -0.62
LRP3-203ENST00000590278 HLA-DRB4X5D2U9 266 aa11.18□□□□□ -0.62
LRP3-203ENST00000590278 TRAV21A0A0B4J279 112 aa11.18□□□□□ -0.62
LRP3-203ENST00000590278 NPFFO15130 113 aa11.18□□□□□ -0.62
LRP3-203ENST00000590278 PF4V1P10720 104 aa11.18□□□□□ -0.62
LRP3-203ENST00000590278 PRSS29PA6NIE9 313 aa11.17□□□□□ -0.62
LRP3-203ENST00000590278 C1orf122Q6ZSJ8 110 aa11.17□□□□□ -0.62
LRP3-203ENST00000590278 MRAP2Q96G30 205 aa11.17□□□□□ -0.62
LRP3-203ENST00000590278 A0A087WWL8 130 aa11.17□□□□□ -0.62
LRP3-203ENST00000590278 GAGE12HA6NDE8 117 aa11.17□□□□□ -0.62
LRP3-203ENST00000590278 LINC01546A6NGU7 62 aa11.17□□□□□ -0.62
LRP3-203ENST00000590278 RRN3P1Q2M238 152 aa11.17□□□□□ -0.62
LRP3-203ENST00000590278 JPT2Q9H910 190 aa11.17□□□□□ -0.62
LRP3-203ENST00000590278 LINC01549A6NIU2 74 aa11.17□□□□□ -0.62
LRP3-203ENST00000590278 F8W1H4 67 aa11.17□□□□□ -0.62
LRP3-203ENST00000590278 C9orf139Q6ZV77 190 aa11.17□□□□□ -0.62
LRP3-203ENST00000590278 DUSP14O95147 198 aaKnown RBP11.16□□□□□ -0.62
LRP3-203ENST00000590278 PSMB2P49721 201 aa11.16□□□□□ -0.62
LRP3-203ENST00000590278 BAALCQ8WXS3 180 aa11.16□□□□□ -0.62
LRP3-203ENST00000590278 SPOCK3Q9BQ16 436 aa11.16□□□□□ -0.62
LRP3-203ENST00000590278 SPANXB1Q9NS25 103 aaPredicted RBP11.16□□□□□ -0.62
LRP3-203ENST00000590278 LGALS1P09382 135 aaKnown RBP11.16□□□□□ -0.62
LRP3-203ENST00000590278 PLEKHB2Q96CS7 222 aa11.16□□□□□ -0.62
LRP3-203ENST00000590278 PSMG3-AS1Q96PY0 264 aa11.16□□□□□ -0.62
LRP3-203ENST00000590278 SPAG8Q99932 426 aaPredicted RBP11.16□□□□□ -0.62
LRP3-203ENST00000590278 FBXL19-AS1Q494R0 122 aa11.15□□□□□ -0.62
LRP3-203ENST00000590278 TMEM170BQ5T4T1 132 aa11.15□□□□□ -0.62
LRP3-203ENST00000590278 C5orf56Q8N8D9 126 aa11.15□□□□□ -0.62
LRP3-203ENST00000590278 NOTCH3Q9UM47 2321 aa11.15□□□□□ -0.62
LRP3-203ENST00000590278 ZFAND2AQ8N6M9 145 aa11.15□□□□□ -0.63
LRP3-203ENST00000590278 TOMM6Q96B49 74 aa11.14□□□□□ -0.63
LRP3-203ENST00000590278 TP53TG1Q9Y2A0 90 aa11.14□□□□□ -0.63
LRP3-203ENST00000590278 ZNF256Q9Y2P7 627 aaPredicted RBP11.14□□□□□ -0.63
LRP3-203ENST00000590278 RPL39P62891 51 aaKnown RBP11.14□□□□□ -0.63
LRP3-203ENST00000590278 NEXN-AS1Q8NBZ9 246 aa11.14□□□□□ -0.63
LRP3-203ENST00000590278 TRBV7-3A0A075B6L6 115 aa11.13□□□□□ -0.63
LRP3-203ENST00000590278 LINC00477Q96M19 166 aa11.13□□□□□ -0.63
LRP3-203ENST00000590278 TAL2Q16559 108 aa11.13□□□□□ -0.63
LRP3-203ENST00000590278 IGHV3-64A0A075B6Q5 118 aa11.13□□□□□ -0.63
LRP3-203ENST00000590278 AJUBAQ96IF1 538 aa11.13□□□□□ -0.63
LRP3-203ENST00000590278 H7C2G1 150 aa11.12□□□□□ -0.63
LRP3-203ENST00000590278 MRPL53Q96EL3 112 aaKnown RBP11.12□□□□□ -0.63
LRP3-203ENST00000590278 MOB4Q9Y3A3 225 aa11.12□□□□□ -0.63
LRP3-203ENST00000590278 CD7P09564 240 aa11.12□□□□□ -0.63
LRP3-203ENST00000590278 TRAV12-1A0A0B4J245 112 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 TRAV12-3A0A0B4J271 114 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 NDUFS8O00217 210 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 EDN2P20800 178 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 KLRB1Q12918 225 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 FAM159AQ6UWV7 190 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 ZFP2Q6ZN57 461 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 PTH2Q96A98 100 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 VPS13CQ709C8 3753 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 SCGB1C2P0DMR2 95 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 CLEC2AQ6UVW9 174 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 C20orf78Q9BR46 151 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 RHPN1-AS1Q9BWJ2 59 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 TMEM238LA0A1B0GVL6 79 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 C11orf86A6NJI1 115 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 A6NJY4 79 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 OVOL1O14753 267 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 GPHB5Q86YW7 130 aa11.11□□□□□ -0.63
LRP3-203ENST00000590278 IGHV4-4A0A075B6R2 117 aa11.1□□□□□ -0.63
LRP3-203ENST00000590278 HTN1P15515 57 aa11.1□□□□□ -0.63
LRP3-203ENST00000590278 LMO4P61968 165 aa11.1□□□□□ -0.63
LRP3-203ENST00000590278 MORN3Q6PF18 240 aaPredicted RBP11.1□□□□□ -0.63
LRP3-203ENST00000590278 BLCAPP62952 87 aa11.1□□□□□ -0.63
LRP3-203ENST00000590278 U3KQE9 123 aa11.1□□□□□ -0.63
LRP3-203ENST00000590278 RNASE3P12724 160 aaKnown RBP11.09□□□□□ -0.63
LRP3-203ENST00000590278 HERVK_113P61574 105 aa11.09□□□□□ -0.63
LRP3-203ENST00000590278 LY6DQ14210 128 aa11.09□□□□□ -0.63
LRP3-203ENST00000590278 ITLN2Q8WWU7 325 aaPredicted RBP11.09□□□□□ -0.63
LRP3-203ENST00000590278 KIR2DL4Q99706 377 aa11.09□□□□□ -0.63
LRP3-203ENST00000590278 USP9YO00507 2555 aaPredicted RBP11.09□□□□□ -0.63
LRP3-203ENST00000590278 TRAV12-2A0A075B6T6 113 aa11.09□□□□□ -0.63
LRP3-203ENST00000590278 H3BUX3 64 aa11.09□□□□□ -0.63
LRP3-203ENST00000590278 MUC4Q99102 2169 aa11.08□□□□□ -0.63
LRP3-203ENST00000590278 PRSS47A8MTI9 375 aa11.08□□□□□ -0.64
LRP3-203ENST00000590278 ZNF56Q15929 161 aa11.08□□□□□ -0.64
LRP3-203ENST00000590278 DLX4Q92988 240 aaPredicted RBP11.08□□□□□ -0.64
LRP3-203ENST00000590278 FAM223BA6NKX1 122 aa11.08□□□□□ -0.64
LRP3-203ENST00000590278 FAM223AQ8IWN6 122 aa11.08□□□□□ -0.64
LRP3-203ENST00000590278 SYT8Q8NBV8 401 aa11.08□□□□□ -0.64
LRP3-203ENST00000590278 Q6ZS46 218 aa11.08□□□□□ -0.64
LRP3-203ENST00000590278 OPRPNQ99935 248 aaPredicted RBP11.08□□□□□ -0.64
LRP3-203ENST00000590278 ZNF688P0C7X2 276 aa11.07□□□□□ -0.64
LRP3-203ENST00000590278 SDHAF1A6NFY7 115 aa11.06□□□□□ -0.64
LRP3-203ENST00000590278 NDUFA4O00483 81 aa11.06□□□□□ -0.64
LRP3-203ENST00000590278 IGHV4-38-2P0DP08 117 aa11.06□□□□□ -0.64
LRP3-203ENST00000590278 TMEM95Q3KNT9 176 aa11.06□□□□□ -0.64
LRP3-203ENST00000590278 SUMO4Q6EEV6 95 aa11.06□□□□□ -0.64
LRP3-203ENST00000590278 RAX2Q96IS3 184 aa11.06□□□□□ -0.64
LRP3-203ENST00000590278 LENEPQ9Y5L5 61 aa11.06□□□□□ -0.64
LRP3-203ENST00000590278 TSPAN13O95857 204 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms