RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 GCHFRP30047 84 aa12.13□□□□□ -0.47
H3F3B-209ENST00000589949 CDC34P49427 236 aaPredicted RBP12.13□□□□□ -0.47
H3F3B-209ENST00000589949 NFE4Q86UQ8 179 aa12.13□□□□□ -0.47
H3F3B-209ENST00000589949 TMEM75Q8N9X5 138 aa12.13□□□□□ -0.47
H3F3B-209ENST00000589949 MBD3L1Q8WWY6 194 aa12.13□□□□□ -0.47
H3F3B-209ENST00000589949 TRAV9-2A0A087WT02 112 aa12.12□□□□□ -0.47
H3F3B-209ENST00000589949 CTXND1A0A1B0GTU2 59 aa12.12□□□□□ -0.47
H3F3B-209ENST00000589949 GGTLC3B5MD39 225 aa12.12□□□□□ -0.47
H3F3B-209ENST00000589949 TXNDC17Q9BRA2 123 aa12.12□□□□□ -0.47
H3F3B-209ENST00000589949 TRAV1-1A0A0B4J248 108 aa12.11□□□□□ -0.47
H3F3B-209ENST00000589949 TEX46H3BTG2 121 aa12.11□□□□□ -0.47
H3F3B-209ENST00000589949 CRYGDP07320 174 aa12.11□□□□□ -0.47
H3F3B-209ENST00000589949 EVI2AP22794 236 aa12.11□□□□□ -0.47
H3F3B-209ENST00000589949 ZNF726P1Q15940 193 aa12.11□□□□□ -0.47
H3F3B-209ENST00000589949 CFAP126Q5VTH2 177 aa12.11□□□□□ -0.47
H3F3B-209ENST00000589949 CDPF1Q6NVV7 123 aa12.11□□□□□ -0.47
H3F3B-209ENST00000589949 SLC25A29Q8N8R3 303 aa12.11□□□□□ -0.47
H3F3B-209ENST00000589949 C5orf17Q8NAS9 161 aa12.11□□□□□ -0.47
H3F3B-209ENST00000589949 KCNS1Q96KK3 526 aa12.11□□□□□ -0.47
H3F3B-209ENST00000589949 C9orf85Q96MD7 179 aa12.11□□□□□ -0.47
H3F3B-209ENST00000589949 PSG8Q9UQ74 426 aa12.11□□□□□ -0.47
H3F3B-209ENST00000589949 FAT1Q14517 4588 aa12.11□□□□□ -0.47
H3F3B-209ENST00000589949 IGHV3-73A0A0B4J1V6 119 aa12.1□□□□□ -0.47
H3F3B-209ENST00000589949 EREGO14944 169 aa12.1□□□□□ -0.47
H3F3B-209ENST00000589949 RS1O15537 224 aa12.1□□□□□ -0.47
H3F3B-209ENST00000589949 GCGP01275 180 aa12.1□□□□□ -0.47
H3F3B-209ENST00000589949 ZNF876PQ49A33 203 aa12.1□□□□□ -0.47
H3F3B-209ENST00000589949 SLC7A5P1Q8MH63 180 aa12.1□□□□□ -0.47
H3F3B-209ENST00000589949 NHLRC2Q8NBF2 726 aa12.1□□□□□ -0.47
H3F3B-209ENST00000589949 SFT2D1Q8WV19 159 aa12.1□□□□□ -0.47
H3F3B-209ENST00000589949 PGPEP1LA6NFU8 196 aa12.09□□□□□ -0.47
H3F3B-209ENST00000589949 FBLL1A6NHQ2 334 aaKnown RBP12.09□□□□□ -0.47
H3F3B-209ENST00000589949 K7EP13 123 aa12.09□□□□□ -0.47
H3F3B-209ENST00000589949 RNASE3P12724 160 aaKnown RBP12.09□□□□□ -0.47
H3F3B-209ENST00000589949 TIRAPP58753 221 aa12.09□□□□□ -0.47
H3F3B-209ENST00000589949 SUMO1P63165 101 aaKnown RBP12.09□□□□□ -0.47
H3F3B-209ENST00000589949 LINC00479Q96M42 142 aa12.09□□□□□ -0.47
H3F3B-209ENST00000589949 MAP1LC3B2A6NCE7 125 aa12.08□□□□□ -0.48
H3F3B-209ENST00000589949 FLI1Q01543 452 aaPredicted RBP12.08□□□□□ -0.48
H3F3B-209ENST00000589949 ZNF506Q5JVG8 444 aa12.08□□□□□ -0.48
H3F3B-209ENST00000589949 Q6ZSN1 163 aa12.08□□□□□ -0.48
H3F3B-209ENST00000589949 PRNTQ86SH4 94 aa12.08□□□□□ -0.48
H3F3B-209ENST00000589949 COMMD7Q86VX2 200 aa12.08□□□□□ -0.48
H3F3B-209ENST00000589949 MAP1LC3BQ9GZQ8 125 aa12.08□□□□□ -0.48
H3F3B-209ENST00000589949 EPDR1Q9UM22 224 aa12.08□□□□□ -0.48
H3F3B-209ENST00000589949 IGHV3-38A0A0C4DH36 116 aa12.07□□□□□ -0.48
H3F3B-209ENST00000589949 SERTM2A0A1B0GWG4 89 aa12.07□□□□□ -0.48
H3F3B-209ENST00000589949 RAB19A4D1S5 217 aa12.07□□□□□ -0.48
H3F3B-209ENST00000589949 LRCOL1A6NCL2 159 aa12.07□□□□□ -0.48
H3F3B-209ENST00000589949 EPM2AB3EWF7 344 aa12.07□□□□□ -0.48
H3F3B-209ENST00000589949 PFN1P07737 140 aaKnown RBP12.07□□□□□ -0.48
H3F3B-209ENST00000589949 NDFIP1Q9BT67 221 aa12.07□□□□□ -0.48
H3F3B-209ENST00000589949 TRAV34A0A0B4J273 112 aa12.06□□□□□ -0.48
H3F3B-209ENST00000589949 PPT1P50897 306 aa12.06□□□□□ -0.48
H3F3B-209ENST00000589949 CCL20P78556 96 aa12.06□□□□□ -0.48
H3F3B-209ENST00000589949 LINC01556Q5JQF7 62 aa12.06□□□□□ -0.48
H3F3B-209ENST00000589949 SH2D6Q7Z4S9 175 aa12.06□□□□□ -0.48
H3F3B-209ENST00000589949 Q8N3U1 123 aa12.06□□□□□ -0.48
H3F3B-209ENST00000589949 Q9UF83 564 aa12.06□□□□□ -0.48
H3F3B-209ENST00000589949 IGKV3D-20A0A0C4DH25 116 aa12.05□□□□□ -0.48
H3F3B-209ENST00000589949 TRBV6-4A0A1B0GX49 114 aa12.05□□□□□ -0.48
H3F3B-209ENST00000589949 CXorf1O96002 111 aa12.05□□□□□ -0.48
H3F3B-209ENST00000589949 FGF8P55075 233 aaPredicted RBP12.05□□□□□ -0.48
H3F3B-209ENST00000589949 HAMPP81172 84 aa12.05□□□□□ -0.48
H3F3B-209ENST00000589949 SMUG1Q53HV7 270 aa12.05□□□□□ -0.48
H3F3B-209ENST00000589949 C10orf126Q8N4M7 172 aa12.05□□□□□ -0.48
H3F3B-209ENST00000589949 CYB561D1Q8N8Q1 229 aa12.05□□□□□ -0.48
H3F3B-209ENST00000589949 HERC1Q15751 4861 aa12.04□□□□□ -0.48
H3F3B-209ENST00000589949 A0A1B0GV50 99 aa12.04□□□□□ -0.48
H3F3B-209ENST00000589949 IBA57-AS1B1ANH7 110 aa12.04□□□□□ -0.48
H3F3B-209ENST00000589949 PTH2Q96A98 100 aa12.04□□□□□ -0.48
H3F3B-209ENST00000589949 FAM210AQ96ND0 272 aa12.04□□□□□ -0.48
H3F3B-209ENST00000589949 TMEM167BQ9NRX6 74 aa12.04□□□□□ -0.48
H3F3B-209ENST00000589949 K7EQM0 130 aa12.03□□□□□ -0.48
H3F3B-209ENST00000589949 IGHV3-30P01768 117 aa12.03□□□□□ -0.48
H3F3B-209ENST00000589949 IGHV3-33P01772 117 aa12.03□□□□□ -0.48
H3F3B-209ENST00000589949 IGHV3-30-3P0DP02 117 aa12.03□□□□□ -0.48
H3F3B-209ENST00000589949 IGHV3-30-5P0DP03 117 aa12.03□□□□□ -0.48
H3F3B-209ENST00000589949 GCSHP23434 173 aa12.03□□□□□ -0.48
H3F3B-209ENST00000589949 RHOHQ15669 191 aa12.03□□□□□ -0.48
H3F3B-209ENST00000589949 UQCC3Q6UW78 93 aa12.03□□□□□ -0.48
H3F3B-209ENST00000589949 PRADC1Q9BSG0 188 aa12.03□□□□□ -0.48
H3F3B-209ENST00000589949 JPT2Q9H910 190 aa12.03□□□□□ -0.48
H3F3B-209ENST00000589949 SMR3BP02814 79 aaPredicted RBP12.02□□□□□ -0.49
H3F3B-209ENST00000589949 OR10J3Q5JRS4 329 aa12.02□□□□□ -0.49
H3F3B-209ENST00000589949 Q5VSD8 79 aa12.02□□□□□ -0.49
H3F3B-209ENST00000589949 Q9HAA7 133 aa12.02□□□□□ -0.49
H3F3B-209ENST00000589949 ARL2-SNX15V9GYD0 113 aa12.02□□□□□ -0.49
H3F3B-209ENST00000589949 A0A1W2PRE2 83 aa12.01□□□□□ -0.49
H3F3B-209ENST00000589949 RBFOX3A6NFN3 312 aa12.01□□□□□ -0.49
H3F3B-209ENST00000589949 CIDEAO60543 219 aa12.01□□□□□ -0.49
H3F3B-209ENST00000589949 ATP6V1G1O75348 118 aa12.01□□□□□ -0.49
H3F3B-209ENST00000589949 IFNA1P01562 189 aa12.01□□□□□ -0.49
H3F3B-209ENST00000589949 LINC00694P0DN24 101 aa12.01□□□□□ -0.49
H3F3B-209ENST00000589949 CRIP1P50238 77 aa12.01□□□□□ -0.49
H3F3B-209ENST00000589949 UBE2G2P60604 165 aa12.01□□□□□ -0.49
H3F3B-209ENST00000589949 PEA15Q15121 130 aa12.01□□□□□ -0.49
H3F3B-209ENST00000589949 SAPCD1Q5SSQ6 148 aa12.01□□□□□ -0.49
H3F3B-209ENST00000589949 LELP1Q5T871 98 aa12.01□□□□□ -0.49
H3F3B-209ENST00000589949 ATP6V0E2Q8NHE4 81 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms