RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 A0A1B0GUT8 65 aa14.52□□□□□ -0.09
ATG4D-208ENST00000588667 MT-ND6P03923 174 aa14.52□□□□□ -0.09
ATG4D-208ENST00000588667 Q6ZQT7 251 aa14.52□□□□□ -0.09
ATG4D-208ENST00000588667 TMEM256Q8N2U0 113 aa14.52□□□□□ -0.09
ATG4D-208ENST00000588667 IL17DQ8TAD2 202 aa14.52□□□□□ -0.09
ATG4D-208ENST00000588667 TRAPPC1Q9Y5R8 145 aa14.52□□□□□ -0.09
ATG4D-208ENST00000588667 TRAV12-3A0A0B4J271 114 aa14.51□□□□□ -0.09
ATG4D-208ENST00000588667 GRIFINA4D1Z8 144 aa14.51□□□□□ -0.09
ATG4D-208ENST00000588667 DEFB4AO15263 64 aa14.51□□□□□ -0.09
ATG4D-208ENST00000588667 IGLC6P0CF74 106 aa14.51□□□□□ -0.09
ATG4D-208ENST00000588667 RBMY1A1P0DJD3 496 aaKnown RBP14.51□□□□□ -0.09
ATG4D-208ENST00000588667 RBMY1CP0DJD4 496 aa14.51□□□□□ -0.09
ATG4D-208ENST00000588667 HBBP68871 147 aa14.51□□□□□ -0.09
ATG4D-208ENST00000588667 RBMY1FQ15415 496 aaKnown RBP14.51□□□□□ -0.09
ATG4D-208ENST00000588667 C20orf144Q9BQM9 153 aa14.51□□□□□ -0.09
ATG4D-208ENST00000588667 A0A1B0GXF2 115 aa14.5□□□□□ -0.09
ATG4D-208ENST00000588667 SNURFLB1AK76 121 aa14.5□□□□□ -0.09
ATG4D-208ENST00000588667 C3orf84H3BNL1 204 aa14.5□□□□□ -0.09
ATG4D-208ENST00000588667 CTRLP40313 264 aa14.5□□□□□ -0.09
ATG4D-208ENST00000588667 RAB4BP61018 213 aa14.5□□□□□ -0.09
ATG4D-208ENST00000588667 RIGQ13278 110 aa14.5□□□□□ -0.09
ATG4D-208ENST00000588667 LYZL1Q6UWQ5 148 aa14.5□□□□□ -0.09
ATG4D-208ENST00000588667 FAM159AQ6UWV7 190 aa14.5□□□□□ -0.09
ATG4D-208ENST00000588667 KCNS1Q96KK3 526 aa14.5□□□□□ -0.09
ATG4D-208ENST00000588667 A0A1B0GW15 77 aa14.49□□□□□ -0.09
ATG4D-208ENST00000588667 F2Z2F3 143 aa14.49□□□□□ -0.09
ATG4D-208ENST00000588667 ZNF324O75467 553 aaPredicted RBP14.49□□□□□ -0.09
ATG4D-208ENST00000588667 S100A8P05109 93 aa14.49□□□□□ -0.09
ATG4D-208ENST00000588667 ANXA2RQ3ZCQ2 193 aa14.49□□□□□ -0.09
ATG4D-208ENST00000588667 MUC21Q5SSG8 566 aa14.49□□□□□ -0.09
ATG4D-208ENST00000588667 ZNF575Q86XF7 245 aa14.49□□□□□ -0.09
ATG4D-208ENST00000588667 FRZBQ92765 325 aa14.49□□□□□ -0.09
ATG4D-208ENST00000588667 HLA-DQA1P01909 254 aa14.48□□□□□ -0.09
ATG4D-208ENST00000588667 CAMPP49913 170 aa14.48□□□□□ -0.09
ATG4D-208ENST00000588667 RRN3P1Q2M238 152 aa14.48□□□□□ -0.09
ATG4D-208ENST00000588667 ARMS2P0C7Q2 107 aa14.48□□□□□ -0.09
ATG4D-208ENST00000588667 FABP9Q0Z7S8 132 aa14.48□□□□□ -0.09
ATG4D-208ENST00000588667 TMEM136Q6ZRR5 245 aa14.48□□□□□ -0.09
ATG4D-208ENST00000588667 ZFP82Q8N141 532 aa14.48□□□□□ -0.09
ATG4D-208ENST00000588667 CSMD3Q7Z407 3707 aa14.47□□□□□ -0.09
ATG4D-208ENST00000588667 ASIPP42127 132 aa14.47□□□□□ -0.09
ATG4D-208ENST00000588667 TDRG1Q3Y452 100 aa14.47□□□□□ -0.09
ATG4D-208ENST00000588667 LINC01587Q99440 93 aa14.47□□□□□ -0.09
ATG4D-208ENST00000588667 MRPL18Q9H0U6 180 aaKnown RBP14.47□□□□□ -0.09
ATG4D-208ENST00000588667 PHOX2AO14813 284 aa14.46□□□□□ -0.09
ATG4D-208ENST00000588667 CNFNQ9BYD5 112 aa14.46□□□□□ -0.09
ATG4D-208ENST00000588667 OR5AL1P0C617 328 aa14.45□□□□□ -0.1
ATG4D-208ENST00000588667 S100A4P26447 101 aaKnown RBP14.45□□□□□ -0.1
ATG4D-208ENST00000588667 DNLZQ5SXM8 178 aa14.45□□□□□ -0.1
ATG4D-208ENST00000588667 C11orf45Q8TAV5 145 aa14.45□□□□□ -0.1
ATG4D-208ENST00000588667 SSBP4Q9BWG4 385 aaPredicted RBP14.45□□□□□ -0.1
ATG4D-208ENST00000588667 MED14OSP0DP75 135 aa14.44□□□□□ -0.1
ATG4D-208ENST00000588667 IGHV1OR15-1A0A075B7D0 117 aa14.44□□□□□ -0.1
ATG4D-208ENST00000588667 SNAI2O43623 268 aa14.44□□□□□ -0.1
ATG4D-208ENST00000588667 H3BVH4 76 aa14.43□□□□□ -0.1
ATG4D-208ENST00000588667 APCSP02743 223 aa14.43□□□□□ -0.1
ATG4D-208ENST00000588667 TRGC1P0CF51 173 aa14.43□□□□□ -0.1
ATG4D-208ENST00000588667 CASC10Q5T4H9 136 aa14.43□□□□□ -0.1
ATG4D-208ENST00000588667 ZFAND6Q6FIF0 208 aa14.43□□□□□ -0.1
ATG4D-208ENST00000588667 STARD9Q9P2P6 4700 aa14.42□□□□□ -0.1
ATG4D-208ENST00000588667 GNRH2O43555 120 aa14.42□□□□□ -0.1
ATG4D-208ENST00000588667 HIST1H2BKO60814 126 aa14.42□□□□□ -0.1
ATG4D-208ENST00000588667 PRM2P04554 102 aa14.42□□□□□ -0.1
ATG4D-208ENST00000588667 HIST1H2BJP06899 126 aa14.42□□□□□ -0.1
ATG4D-208ENST00000588667 HIST1H2BOP23527 126 aa14.42□□□□□ -0.1
ATG4D-208ENST00000588667 HIST1H2BBP33778 126 aa14.42□□□□□ -0.1
ATG4D-208ENST00000588667 EMP1P54849 157 aa14.42□□□□□ -0.1
ATG4D-208ENST00000588667 HIST1H2BDP58876 126 aa14.42□□□□□ -0.1
ATG4D-208ENST00000588667 HIST1H2BCP62807 126 aa14.42□□□□□ -0.1
ATG4D-208ENST00000588667 CACNG7P62955 275 aa14.42□□□□□ -0.1
ATG4D-208ENST00000588667 TWIST1Q15672 202 aa14.42□□□□□ -0.1
ATG4D-208ENST00000588667 HIST2H2BEQ16778 126 aa14.42□□□□□ -0.1
ATG4D-208ENST00000588667 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.42□□□□□ -0.1
ATG4D-208ENST00000588667 HIST1H2BHQ93079 126 aa14.42□□□□□ -0.1
ATG4D-208ENST00000588667 HIST1H2BNQ99877 126 aa14.42□□□□□ -0.1
ATG4D-208ENST00000588667 HIST1H2BMQ99879 126 aa14.42□□□□□ -0.1
ATG4D-208ENST00000588667 MUC21A0A0G2JKD1 596 aa14.41□□□□□ -0.1
ATG4D-208ENST00000588667 MUC21A0A140T8X8 626 aa14.41□□□□□ -0.1
ATG4D-208ENST00000588667 HTN1P15515 57 aa14.41□□□□□ -0.1
ATG4D-208ENST00000588667 NTF3P20783 257 aa14.41□□□□□ -0.1
ATG4D-208ENST00000588667 NANOS2P60321 138 aaKnown RBP14.41□□□□□ -0.1
ATG4D-208ENST00000588667 GATD1Q8NB37 220 aa14.41□□□□□ -0.1
ATG4D-208ENST00000588667 CELA1Q9UNI1 258 aa14.41□□□□□ -0.1
ATG4D-208ENST00000588667 TEX48A0A1B0GUV7 120 aa14.41□□□□□ -0.1
ATG4D-208ENST00000588667 S100A6P06703 90 aa14.41□□□□□ -0.1
ATG4D-208ENST00000588667 SSTP61278 116 aa14.41□□□□□ -0.1
ATG4D-208ENST00000588667 TMEM263Q8WUH6 116 aaKnown RBP14.41□□□□□ -0.1
ATG4D-208ENST00000588667 C16orf74Q96GX8 76 aa14.41□□□□□ -0.1
ATG4D-208ENST00000588667 TRGV11A0A075B6L2 103 aa14.4□□□□□ -0.1
ATG4D-208ENST00000588667 SPART-AS1P0CW21 52 aa14.4□□□□□ -0.1
ATG4D-208ENST00000588667 AZU1P20160 251 aa14.4□□□□□ -0.1
ATG4D-208ENST00000588667 SPANXN1Q5VSR9 72 aa14.4□□□□□ -0.1
ATG4D-208ENST00000588667 ZNF493Q6ZR52 646 aa14.4□□□□□ -0.1
ATG4D-208ENST00000588667 OR10AG1Q8NH19 301 aa14.4□□□□□ -0.1
ATG4D-208ENST00000588667 RNASE8Q8TDE3 154 aaKnown RBP14.4□□□□□ -0.1
ATG4D-208ENST00000588667 PHLDA3Q9Y5J5 127 aa14.4□□□□□ -0.1
ATG4D-208ENST00000588667 TIMM8BQ9Y5J9 83 aaPredicted RBP14.4□□□□□ -0.1
ATG4D-208ENST00000588667 IGHV4-4A0A075B6R2 117 aa14.39□□□□□ -0.11
ATG4D-208ENST00000588667 RNASE3P12724 160 aaKnown RBP14.39□□□□□ -0.11
ATG4D-208ENST00000588667 SLAQ13239 276 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms