RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, human

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC2-211	ENST00000588652	ZFAND2A	Q8N6M9	145 aa		13.24	□□□□□ -0.29
ERCC2-211	ENST00000588652	SELENOK	Q9Y6D0	94 aa		13.24	□□□□□ -0.29
ERCC2-211	ENST00000588652	DOPEY2	Q9Y3R5	2298 aa		13.24	□□□□□ -0.29
ERCC2-211	ENST00000588652	TRAV21	A0A0B4J279	112 aa		13.23	□□□□□ -0.29
ERCC2-211	ENST00000588652	LAGE3	Q14657	143 aa		13.23	□□□□□ -0.29
ERCC2-211	ENST00000588652	MYOZ3	Q8TDC0	251 aa		13.23	□□□□□ -0.29
ERCC2-211	ENST00000588652	HHLA3	Q9XRX5	114 aa		13.23	□□□□□ -0.29
ERCC2-211	ENST00000588652	PCP4	P48539	62 aa		13.23	□□□□□ -0.29
ERCC2-211	ENST00000588652	FOXC2	Q99958	501 aa		13.23	□□□□□ -0.29
ERCC2-211	ENST00000588652	CREBBP	Q92793	2442 aa		13.23	□□□□□ -0.29
ERCC2-211	ENST00000588652	TEX15	Q9BXT5	2789 aa		13.22	□□□□□ -0.29
ERCC2-211	ENST00000588652	IGKC	P01834	107 aa		13.22	□□□□□ -0.29
ERCC2-211	ENST00000588652	SMIM17	P0DL12	118 aa		13.22	□□□□□ -0.29
ERCC2-211	ENST00000588652	RBX1	P62877	108 aa		13.22	□□□□□ -0.29
ERCC2-211	ENST00000588652	MRAP2	Q96G30	205 aa		13.22	□□□□□ -0.29
ERCC2-211	ENST00000588652	IGKV2D-26	A0A0A0MRZ7	120 aa		13.22	□□□□□ -0.29
ERCC2-211	ENST00000588652		F6UB75	175 aa		13.22	□□□□□ -0.29
ERCC2-211	ENST00000588652	S100A4	P26447	101 aa	Known RBP	13.22	□□□□□ -0.29
ERCC2-211	ENST00000588652	SRD5A1	P18405	259 aa		13.21	□□□□□ -0.29
ERCC2-211	ENST00000588652	AP1S3	Q96PC3	154 aa		13.21	□□□□□ -0.29
ERCC2-211	ENST00000588652	PF4	P02776	101 aa		13.21	□□□□□ -0.3
ERCC2-211	ENST00000588652	FAM19A4	Q96LR4	140 aa		13.21	□□□□□ -0.3
ERCC2-211	ENST00000588652		Q96MF0	132 aa		13.21	□□□□□ -0.3
ERCC2-211	ENST00000588652	APC	P25054	2843 aa		13.21	□□□□□ -0.3
ERCC2-211	ENST00000588652		H3BRM9	83 aa		13.2	□□□□□ -0.3
ERCC2-211	ENST00000588652	DPM2	O94777	84 aa		13.2	□□□□□ -0.3
ERCC2-211	ENST00000588652	ASIP	P42127	132 aa		13.2	□□□□□ -0.3
ERCC2-211	ENST00000588652	ZNF702P	Q9H963	129 aa		13.2	□□□□□ -0.3
ERCC2-211	ENST00000588652	HOXA3	O43365	443 aa	Predicted RBP	13.2	□□□□□ -0.3
ERCC2-211	ENST00000588652		M0R381	172 aa		13.19	□□□□□ -0.3
ERCC2-211	ENST00000588652	KIR3DS1	Q14943	382 aa		13.19	□□□□□ -0.3
ERCC2-211	ENST00000588652	DCANP1	Q8TF63	244 aa		13.19	□□□□□ -0.3
ERCC2-211	ENST00000588652	C9orf118	A6NHY6	69 aa		13.19	□□□□□ -0.3
ERCC2-211	ENST00000588652	KRTAP1-3	Q8IUG1	177 aa		13.18	□□□□□ -0.3
ERCC2-211	ENST00000588652	JMJD8	Q96S16	334 aa		13.18	□□□□□ -0.3
ERCC2-211	ENST00000588652	PHLDA3	Q9Y5J5	127 aa		13.18	□□□□□ -0.3
ERCC2-211	ENST00000588652	RNASE4	P34096	147 aa	Known RBP	13.18	□□□□□ -0.3
ERCC2-211	ENST00000588652	APRG1	Q8IVJ8	170 aa		13.18	□□□□□ -0.3
ERCC2-211	ENST00000588652	TTTY13	Q9BZ97	58 aa		13.18	□□□□□ -0.3
ERCC2-211	ENST00000588652	TRBV7-9	A0A0J9YWB2	115 aa		13.17	□□□□□ -0.3
ERCC2-211	ENST00000588652	SPRY2	O43597	315 aa		13.17	□□□□□ -0.3
ERCC2-211	ENST00000588652	ELANE	P08246	267 aa		13.17	□□□□□ -0.3
ERCC2-211	ENST00000588652	GTSCR1	Q86UQ5	136 aa		13.17	□□□□□ -0.3
ERCC2-211	ENST00000588652	SMIM2	Q9BVW6	85 aa		13.17	□□□□□ -0.3
ERCC2-211	ENST00000588652	ANXA2R	Q3ZCQ2	193 aa		13.17	□□□□□ -0.3
ERCC2-211	ENST00000588652	DPH3P1	Q9H4G8	78 aa		13.17	□□□□□ -0.3
ERCC2-211	ENST00000588652	TMEM160	Q9NX00	188 aa		13.17	□□□□□ -0.3
ERCC2-211	ENST00000588652	MRPL35	Q9NZE8	188 aa	Known RBP	13.17	□□□□□ -0.3
ERCC2-211	ENST00000588652	LGALS1	P09382	135 aa	Known RBP	13.16	□□□□□ -0.3
ERCC2-211	ENST00000588652	MED14OS	P0DP75	135 aa		13.16	□□□□□ -0.3
ERCC2-211	ENST00000588652	ID1	P41134	155 aa		13.16	□□□□□ -0.3
ERCC2-211	ENST00000588652	ZC2HC1B	Q5TFG8	222 aa		13.16	□□□□□ -0.3
ERCC2-211	ENST00000588652	SAMD13	Q5VXD3	122 aa		13.16	□□□□□ -0.3
ERCC2-211	ENST00000588652	CST9L	Q9H4G1	147 aa		13.16	□□□□□ -0.3
ERCC2-211	ENST00000588652	HIGD1B	Q9P298	99 aa		13.16	□□□□□ -0.3
ERCC2-211	ENST00000588652	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.15	□□□□□ -0.3
ERCC2-211	ENST00000588652	GAGE10	A6NGK3	116 aa		13.15	□□□□□ -0.3
ERCC2-211	ENST00000588652	ORMDL2	Q53FV1	153 aa		13.15	□□□□□ -0.3
ERCC2-211	ENST00000588652	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	13.14	□□□□□ -0.31
ERCC2-211	ENST00000588652		H3BUT2	72 aa		13.14	□□□□□ -0.31
ERCC2-211	ENST00000588652	CDKN1B	P46527	198 aa		13.14	□□□□□ -0.31
ERCC2-211	ENST00000588652	UFSP1	Q6NVU6	142 aa		13.14	□□□□□ -0.31
ERCC2-211	ENST00000588652	RASL10A	Q92737	203 aa		13.14	□□□□□ -0.31
ERCC2-211	ENST00000588652	UBE2E2	Q96LR5	201 aa		13.14	□□□□□ -0.31
ERCC2-211	ENST00000588652	IGHV4OR15-8	A0A075B7B6	117 aa		13.14	□□□□□ -0.31
ERCC2-211	ENST00000588652		A0A087WW49	117 aa		13.14	□□□□□ -0.31
ERCC2-211	ENST00000588652		A0A087WX48	190 aa		13.14	□□□□□ -0.31
ERCC2-211	ENST00000588652	HLA-DRB4	P13762	266 aa		13.14	□□□□□ -0.31
ERCC2-211	ENST00000588652	SYNJ2BP	P57105	145 aa		13.14	□□□□□ -0.31
ERCC2-211	ENST00000588652	SUMO2	P61956	95 aa	Known RBP	13.14	□□□□□ -0.31
ERCC2-211	ENST00000588652	GTF2H5	Q6ZYL4	71 aa		13.14	□□□□□ -0.31
ERCC2-211	ENST00000588652	C14orf178	Q8N769	122 aa	Predicted RBP	13.14	□□□□□ -0.31
ERCC2-211	ENST00000588652	C20orf78	Q9BR46	151 aa		13.14	□□□□□ -0.31
ERCC2-211	ENST00000588652	NAA38	Q9BRA0	125 aa	Known RBP	13.14	□□□□□ -0.31
ERCC2-211	ENST00000588652	HLA-DRB4	X5D2U9	266 aa		13.14	□□□□□ -0.31
ERCC2-211	ENST00000588652	GAGE12B	A1L429	117 aa		13.13	□□□□□ -0.31
ERCC2-211	ENST00000588652	RNF152	Q8N8N0	203 aa		13.13	□□□□□ -0.31
ERCC2-211	ENST00000588652	CHAC1	Q9BUX1	264 aa		13.13	□□□□□ -0.31
ERCC2-211	ENST00000588652	MGP	P08493	103 aa		13.13	□□□□□ -0.31
ERCC2-211	ENST00000588652	RAB37	Q96AX2	223 aa		13.13	□□□□□ -0.31
ERCC2-211	ENST00000588652	DUX5	Q96PT3	197 aa		13.13	□□□□□ -0.31
ERCC2-211	ENST00000588652	NBPF19	A0A087WUL8	3843 aa		13.13	□□□□□ -0.31
ERCC2-211	ENST00000588652	KLLN	B2CW77	178 aa		13.12	□□□□□ -0.31
ERCC2-211	ENST00000588652		K7EMI3	77 aa		13.12	□□□□□ -0.31
ERCC2-211	ENST00000588652	LGALS9	O00182	355 aa		13.12	□□□□□ -0.31
ERCC2-211	ENST00000588652	RPL39L	Q96EH5	51 aa	Known RBP	13.12	□□□□□ -0.31
ERCC2-211	ENST00000588652	TRBV25-1	A0A075B6N4	114 aa		13.12	□□□□□ -0.31
ERCC2-211	ENST00000588652	GNRH2	O43555	120 aa		13.12	□□□□□ -0.31
ERCC2-211	ENST00000588652	PLN	P26678	52 aa		13.12	□□□□□ -0.31
ERCC2-211	ENST00000588652	OCIAD2	Q56VL3	154 aa		13.12	□□□□□ -0.31
ERCC2-211	ENST00000588652	PPP1R17	O96001	155 aa		13.11	□□□□□ -0.31
ERCC2-211	ENST00000588652	HOXD3	P31249	432 aa	Predicted RBP	13.11	□□□□□ -0.31
ERCC2-211	ENST00000588652	FXYD2	P54710	66 aa		13.11	□□□□□ -0.31
ERCC2-211	ENST00000588652	SCGB3A1	Q96QR1	104 aa		13.11	□□□□□ -0.31
ERCC2-211	ENST00000588652		K7EP34	96 aa		13.11	□□□□□ -0.31
ERCC2-211	ENST00000588652	ZNF688	P0C7X2	276 aa		13.11	□□□□□ -0.31
ERCC2-211	ENST00000588652	RNASE3	P12724	160 aa	Known RBP	13.11	□□□□□ -0.31
ERCC2-211	ENST00000588652	GCSH	P23434	173 aa		13.11	□□□□□ -0.31
ERCC2-211	ENST00000588652		Q8N2B8	174 aa		13.11	□□□□□ -0.31
ERCC2-211	ENST00000588652	TLN2	Q9Y4G6	2542 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 322 ms