RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 CDK2AP2O75956 126 aa14.85□□□□□ -0.03
CIRBP-219ENST00000588411 DNAH10OSP0CZ25 163 aa14.85□□□□□ -0.03
CIRBP-219ENST00000588411 RNASE3P12724 160 aaKnown RBP14.85□□□□□ -0.03
CIRBP-219ENST00000588411 FHITP49789 147 aa14.85□□□□□ -0.03
CIRBP-219ENST00000588411 CST9LP1Q5W188 147 aa14.85□□□□□ -0.03
CIRBP-219ENST00000588411 Q6ZRN7 208 aaPredicted RBP14.85□□□□□ -0.03
CIRBP-219ENST00000588411 WFDC10BQ8IUB3 73 aa14.85□□□□□ -0.03
CIRBP-219ENST00000588411 C10orf126Q8N4M7 172 aa14.85□□□□□ -0.03
CIRBP-219ENST00000588411 SLC25A29Q8N8R3 303 aa14.85□□□□□ -0.03
CIRBP-219ENST00000588411 FMC1Q96HJ9 113 aa14.85□□□□□ -0.03
CIRBP-219ENST00000588411 LRP1BQ9NZR2 4599 aa14.84□□□□□ -0.03
CIRBP-219ENST00000588411 A0A0D9SG52 128 aa14.84□□□□□ -0.03
CIRBP-219ENST00000588411 PGPEP1LA6NFU8 196 aa14.84□□□□□ -0.03
CIRBP-219ENST00000588411 UMAD1C9J7I0 102 aa14.84□□□□□ -0.03
CIRBP-219ENST00000588411 MGST1P10620 155 aaKnown RBP14.84□□□□□ -0.03
CIRBP-219ENST00000588411 ERVFC1-1P60608 527 aa14.84□□□□□ -0.03
CIRBP-219ENST00000588411 PIK3CD-AS1Q5SR53 167 aa14.84□□□□□ -0.03
CIRBP-219ENST00000588411 IGHV3-73A0A0B4J1V6 119 aa14.83□□□□□ -0.04
CIRBP-219ENST00000588411 IGKV3D-20A0A0C4DH25 116 aa14.83□□□□□ -0.04
CIRBP-219ENST00000588411 KANTRA0A1W2PQU2 76 aa14.83□□□□□ -0.04
CIRBP-219ENST00000588411 HMSDA8MTL9 139 aa14.83□□□□□ -0.04
CIRBP-219ENST00000588411 A8MWV9 139 aa14.83□□□□□ -0.04
CIRBP-219ENST00000588411 B4DEV8 164 aa14.83□□□□□ -0.04
CIRBP-219ENST00000588411 SEC11BP0C7V7 166 aa14.83□□□□□ -0.04
CIRBP-219ENST00000588411 DPPA3Q6W0C5 159 aa14.83□□□□□ -0.04
CIRBP-219ENST00000588411 MSRB1Q9NZV6 116 aa14.83□□□□□ -0.04
CIRBP-219ENST00000588411 PCLOQ9Y6V0 5065 aa14.83□□□□□ -0.04
CIRBP-219ENST00000588411 TRAV8-6A0A0B4J262 113 aa14.82□□□□□ -0.04
CIRBP-219ENST00000588411 CRYGDP07320 174 aa14.82□□□□□ -0.04
CIRBP-219ENST00000588411 EIF5AP63241 154 aaKnown RBP14.82□□□□□ -0.04
CIRBP-219ENST00000588411 LGALSLQ3ZCW2 172 aaPredicted RBP14.82□□□□□ -0.04
CIRBP-219ENST00000588411 FAM162BQ5T6X4 162 aa14.82□□□□□ -0.04
CIRBP-219ENST00000588411 KRTAP17-1Q9BYP8 105 aa14.82□□□□□ -0.04
CIRBP-219ENST00000588411 ZFP2Q6ZN57 461 aa14.81□□□□□ -0.04
CIRBP-219ENST00000588411 COX8CQ7Z4L0 72 aa14.81□□□□□ -0.04
CIRBP-219ENST00000588411 SYT8Q8NBV8 401 aa14.81□□□□□ -0.04
CIRBP-219ENST00000588411 ZNF471Q9BX82 626 aaPredicted RBP14.81□□□□□ -0.04
CIRBP-219ENST00000588411 IL36BQ9NZH7 164 aa14.81□□□□□ -0.04
CIRBP-219ENST00000588411 IGHV3-38A0A0C4DH36 116 aa14.8□□□□□ -0.04
CIRBP-219ENST00000588411 TRBV6-1A0A0K0K1D8 114 aa14.8□□□□□ -0.04
CIRBP-219ENST00000588411 BCL2L11O43521 198 aa14.8□□□□□ -0.04
CIRBP-219ENST00000588411 AKR1C3P42330 323 aa14.8□□□□□ -0.04
CIRBP-219ENST00000588411 KRTAP10-2P60368 255 aa14.8□□□□□ -0.04
CIRBP-219ENST00000588411 FAM213BQ8TBF2 198 aa14.8□□□□□ -0.04
CIRBP-219ENST00000588411 SFT2D1Q8WV19 159 aa14.8□□□□□ -0.04
CIRBP-219ENST00000588411 ZC2HC1AQ96GY0 325 aa14.8□□□□□ -0.04
CIRBP-219ENST00000588411 SH2D1AO60880 128 aa14.79□□□□□ -0.04
CIRBP-219ENST00000588411 OR10J3Q5JRS4 329 aa14.79□□□□□ -0.04
CIRBP-219ENST00000588411 PARLQ9H300 379 aa14.79□□□□□ -0.04
CIRBP-219ENST00000588411 TNFRSF18Q9Y5U5 241 aa14.79□□□□□ -0.04
CIRBP-219ENST00000588411 KRBOX1C9JBD0 128 aa14.78□□□□□ -0.04
CIRBP-219ENST00000588411 H3BVH4 76 aa14.78□□□□□ -0.04
CIRBP-219ENST00000588411 M0R036 132 aa14.78□□□□□ -0.04
CIRBP-219ENST00000588411 PAGE4O60829 102 aa14.78□□□□□ -0.04
CIRBP-219ENST00000588411 PFDN1O60925 122 aa14.78□□□□□ -0.04
CIRBP-219ENST00000588411 LTAP01374 205 aa14.78□□□□□ -0.04
CIRBP-219ENST00000588411 S100A9P06702 114 aaKnown RBP14.78□□□□□ -0.04
CIRBP-219ENST00000588411 MBD3L1Q8WWY6 194 aa14.78□□□□□ -0.04
CIRBP-219ENST00000588411 PGPEP1Q9NXJ5 209 aa14.78□□□□□ -0.04
CIRBP-219ENST00000588411 HSPG2P98160 4391 aa14.78□□□□□ -0.04
CIRBP-219ENST00000588411 LINC01556Q5JQF7 62 aa14.77□□□□□ -0.05
CIRBP-219ENST00000588411 DNLZQ5SXM8 178 aa14.77□□□□□ -0.05
CIRBP-219ENST00000588411 OR11H4Q8NGC9 324 aa14.77□□□□□ -0.05
CIRBP-219ENST00000588411 ATP6V0E2Q8NHE4 81 aa14.77□□□□□ -0.05
CIRBP-219ENST00000588411 GTSF1LQ9H1H1 148 aa14.77□□□□□ -0.05
CIRBP-219ENST00000588411 RHODO00212 210 aa14.76□□□□□ -0.05
CIRBP-219ENST00000588411 CRIP1P50238 77 aa14.76□□□□□ -0.05
CIRBP-219ENST00000588411 LELP1Q5T871 98 aa14.76□□□□□ -0.05
CIRBP-219ENST00000588411 CDPF1Q6NVV7 123 aa14.76□□□□□ -0.05
CIRBP-219ENST00000588411 ARMS2P0C7Q2 107 aa14.75□□□□□ -0.05
CIRBP-219ENST00000588411 ZNF674Q2M3X9 581 aa14.75□□□□□ -0.05
CIRBP-219ENST00000588411 PHLDA3Q9Y5J5 127 aa14.75□□□□□ -0.05
CIRBP-219ENST00000588411 A0A1B0GV50 99 aa14.74□□□□□ -0.05
CIRBP-219ENST00000588411 H2AFB1P0C5Y9 115 aa14.74□□□□□ -0.05
CIRBP-219ENST00000588411 TPT1P13693 172 aaKnown RBP14.74□□□□□ -0.05
CIRBP-219ENST00000588411 LINC01559Q495D7 138 aa14.74□□□□□ -0.05
CIRBP-219ENST00000588411 A0A087WTM6 91 aa14.73□□□□□ -0.05
CIRBP-219ENST00000588411 GRIFINA4D1Z8 144 aa14.73□□□□□ -0.05
CIRBP-219ENST00000588411 DMRTA1Q5VZB9 504 aa14.73□□□□□ -0.05
CIRBP-219ENST00000588411 MAPKAPK5-AS1Q8N8E1 139 aa14.73□□□□□ -0.05
CIRBP-219ENST00000588411 TMSB15BA0A087X1C1 80 aa14.72□□□□□ -0.05
CIRBP-219ENST00000588411 GAGE12JA6NER3 117 aa14.72□□□□□ -0.05
CIRBP-219ENST00000588411 PSCAO43653 123 aa14.72□□□□□ -0.05
CIRBP-219ENST00000588411 GAGE1Q13065 139 aa14.72□□□□□ -0.05
CIRBP-219ENST00000588411 GAGE4Q13068 117 aa14.72□□□□□ -0.05
CIRBP-219ENST00000588411 GAGE5Q13069 117 aa14.72□□□□□ -0.05
CIRBP-219ENST00000588411 GAGE13Q4V321 117 aa14.72□□□□□ -0.05
CIRBP-219ENST00000588411 TMUB2Q71RG4 321 aa14.72□□□□□ -0.05
CIRBP-219ENST00000588411 DNAH5Q8TE73 4624 aa14.71□□□□□ -0.05
CIRBP-219ENST00000588411 Q6ZSN1 163 aa14.71□□□□□ -0.05
CIRBP-219ENST00000588411 ZFP82Q8N141 532 aa14.71□□□□□ -0.05
CIRBP-219ENST00000588411 APOBP04114 4563 aaKnown RBP14.7□□□□□ -0.06
CIRBP-219ENST00000588411 SCO2A0A1W2PP80 73 aa14.7□□□□□ -0.06
CIRBP-219ENST00000588411 IBA57-AS1B1ANH7 110 aa14.7□□□□□ -0.06
CIRBP-219ENST00000588411 FAM74A4Q5TZK3 123 aa14.7□□□□□ -0.06
CIRBP-219ENST00000588411 EIF5AL1Q6IS14 154 aaKnown RBP14.7□□□□□ -0.06
CIRBP-219ENST00000588411 UFSP1Q6NVU6 142 aa14.7□□□□□ -0.06
CIRBP-219ENST00000588411 SAMD10Q9BYL1 202 aa14.7□□□□□ -0.06
CIRBP-219ENST00000588411 JPT2Q9H910 190 aa14.7□□□□□ -0.06
CIRBP-219ENST00000588411 SCRT2Q9NQ03 307 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms