RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 PHLDA3Q9Y5J5 127 aa7.71□□□□□ -1.18
CHMP1B-202ENST00000588284 LOC100996750A0A140TA64 210 aa7.7□□□□□ -1.18
CHMP1B-202ENST00000588284 CBY3A6NI87 242 aa7.7□□□□□ -1.18
CHMP1B-202ENST00000588284 H3BVH4 76 aa7.7□□□□□ -1.18
CHMP1B-202ENST00000588284 TMEM208Q9BTX3 173 aa7.7□□□□□ -1.18
CHMP1B-202ENST00000588284 KRTAP4-6Q9BYQ5 205 aa7.7□□□□□ -1.18
CHMP1B-202ENST00000588284 TMEM191AQ9H0A3 160 aa7.7□□□□□ -1.18
CHMP1B-202ENST00000588284 SCRT2Q9NQ03 307 aa7.7□□□□□ -1.18
CHMP1B-202ENST00000588284 XCL2Q9UBD3 114 aa7.7□□□□□ -1.18
CHMP1B-202ENST00000588284 GOLT1BQ9Y3E0 138 aa7.7□□□□□ -1.18
CHMP1B-202ENST00000588284 CUBNO60494 3623 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 IGHV3-16A0A0C4DH30 117 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 HIST1H2BKO60814 126 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 HIST1H2BJP06899 126 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 HIST1H2BOP23527 126 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 HIST1H2BBP33778 126 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 NDUFA6P56556 154 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 HIST1H2BDP58876 126 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 SSTP61278 116 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 HIST1H2BCP62807 126 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 HIST2H2BEQ16778 126 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 Q8N1Y9 231 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 DEFB125Q8N687 156 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 SYT8Q8NBV8 401 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 HIST1H2BHQ93079 126 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 HIST1H2BNQ99877 126 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 HIST1H2BMQ99879 126 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 CSTL1Q9H114 145 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 TP53TG3Q9ULZ0 132 aa7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 TIMM8BQ9Y5J9 83 aaPredicted RBP7.69□□□□□ -1.18
CHMP1B-202ENST00000588284 RNASE3P12724 160 aaKnown RBP7.68□□□□□ -1.18
CHMP1B-202ENST00000588284 RPL35AP18077 110 aaKnown RBP7.68□□□□□ -1.18
CHMP1B-202ENST00000588284 FAM104BQ5XKR9 115 aa7.68□□□□□ -1.18
CHMP1B-202ENST00000588284 OR10AG1Q8NH19 301 aa7.68□□□□□ -1.18
CHMP1B-202ENST00000588284 SPXQ9BT56 116 aa7.68□□□□□ -1.18
CHMP1B-202ENST00000588284 AGRNO00468 2067 aa7.67□□□□□ -1.18
CHMP1B-202ENST00000588284 LOC102724200A0A096LPH7 203 aaPredicted RBP7.67□□□□□ -1.18
CHMP1B-202ENST00000588284 MUC21A0A0G2JKD1 596 aa7.67□□□□□ -1.18
CHMP1B-202ENST00000588284 KIR2DL5BA0A0G2JN68 375 aa7.67□□□□□ -1.18
CHMP1B-202ENST00000588284 KIR2DL5BA0A0G2JPC4 375 aa7.67□□□□□ -1.18
CHMP1B-202ENST00000588284 MUC21A0A140T8X8 626 aa7.67□□□□□ -1.18
CHMP1B-202ENST00000588284 PPBPP02775 128 aa7.67□□□□□ -1.18
CHMP1B-202ENST00000588284 ZNF415Q09FC8 603 aa7.67□□□□□ -1.18
CHMP1B-202ENST00000588284 Q0VG73 95 aa7.67□□□□□ -1.18
CHMP1B-202ENST00000588284 SLAQ13239 276 aa7.67□□□□□ -1.18
CHMP1B-202ENST00000588284 KIAA1644Q3SXP7 199 aa7.67□□□□□ -1.18
CHMP1B-202ENST00000588284 PIK3CD-AS1Q5SR53 167 aa7.67□□□□□ -1.18
CHMP1B-202ENST00000588284 KIR2DL5AQ8N109 375 aa7.67□□□□□ -1.18
CHMP1B-202ENST00000588284 C1orf158Q8N1D5 194 aa7.67□□□□□ -1.18
CHMP1B-202ENST00000588284 KIR2DL5BQ8NHK3 375 aa7.67□□□□□ -1.18
CHMP1B-202ENST00000588284 PTH2Q96A98 100 aa7.67□□□□□ -1.18
CHMP1B-202ENST00000588284 C9orf85Q96MD7 179 aa7.67□□□□□ -1.18
CHMP1B-202ENST00000588284 C5orf52A6NGY3 159 aa7.66□□□□□ -1.18
CHMP1B-202ENST00000588284 M0R381 172 aa7.66□□□□□ -1.18
CHMP1B-202ENST00000588284 RBMY1A1P0DJD3 496 aaKnown RBP7.66□□□□□ -1.18
CHMP1B-202ENST00000588284 RBMY1CP0DJD4 496 aa7.66□□□□□ -1.18
CHMP1B-202ENST00000588284 HTN1P15515 57 aa7.66□□□□□ -1.18
CHMP1B-202ENST00000588284 APOC4P55056 127 aa7.66□□□□□ -1.18
CHMP1B-202ENST00000588284 RBMY1FQ15415 496 aaKnown RBP7.66□□□□□ -1.18
CHMP1B-202ENST00000588284 OR10J3Q5JRS4 329 aa7.66□□□□□ -1.18
CHMP1B-202ENST00000588284 COA6Q5JTJ3 125 aaKnown RBP7.66□□□□□ -1.18
CHMP1B-202ENST00000588284 ALKBH7Q9BT30 221 aaPredicted RBP7.66□□□□□ -1.18
CHMP1B-202ENST00000588284 WFDC10AQ9H1F0 79 aa7.66□□□□□ -1.18
CHMP1B-202ENST00000588284 MSRB1Q9NZV6 116 aa7.66□□□□□ -1.18
CHMP1B-202ENST00000588284 MDFICQ9P1T7 246 aa7.66□□□□□ -1.18
CHMP1B-202ENST00000588284 UBE2CO00762 179 aa7.65□□□□□ -1.18
CHMP1B-202ENST00000588284 NXPH4O95158 308 aa7.65□□□□□ -1.18
CHMP1B-202ENST00000588284 SMIM17P0DL12 118 aa7.65□□□□□ -1.18
CHMP1B-202ENST00000588284 RAB4AP20338 218 aa7.65□□□□□ -1.18
CHMP1B-202ENST00000588284 HOXA5P20719 270 aa7.65□□□□□ -1.18
CHMP1B-202ENST00000588284 SRIP30626 198 aa7.65□□□□□ -1.18
CHMP1B-202ENST00000588284 SNRPEP62304 92 aaKnown RBP7.65□□□□□ -1.18
CHMP1B-202ENST00000588284 EGFEM1PQ0D2K5 195 aa7.65□□□□□ -1.18
CHMP1B-202ENST00000588284 BAGE3Q86Y29 109 aa7.65□□□□□ -1.18
CHMP1B-202ENST00000588284 AP1S3Q96PC3 154 aa7.65□□□□□ -1.18
CHMP1B-202ENST00000588284 NDUFAF3Q9BU61 184 aa7.65□□□□□ -1.18
CHMP1B-202ENST00000588284 DPH3P1Q9H4G8 78 aa7.65□□□□□ -1.18
CHMP1B-202ENST00000588284 IGHV3OR16-12A0A075B7B8 117 aa7.64□□□□□ -1.19
CHMP1B-202ENST00000588284 SMIM9A6NGZ8 99 aa7.64□□□□□ -1.19
CHMP1B-202ENST00000588284 M0R2P5 195 aa7.64□□□□□ -1.19
CHMP1B-202ENST00000588284 GIG44P09565 113 aaPredicted RBP7.64□□□□□ -1.19
CHMP1B-202ENST00000588284 EVI2AP22794 236 aa7.64□□□□□ -1.19
CHMP1B-202ENST00000588284 CKS2P33552 79 aa7.64□□□□□ -1.19
CHMP1B-202ENST00000588284 MRPL51Q4U2R6 128 aaKnown RBP7.64□□□□□ -1.19
CHMP1B-202ENST00000588284 AMN1Q8IY45 258 aa7.64□□□□□ -1.19
CHMP1B-202ENST00000588284 ORMDL3Q8N138 153 aa7.64□□□□□ -1.19
CHMP1B-202ENST00000588284 CSNK1G2-AS1Q8NCQ2 148 aa7.64□□□□□ -1.19
CHMP1B-202ENST00000588284 RCHY1Q96PM5 261 aa7.64□□□□□ -1.19
CHMP1B-202ENST00000588284 LAMTOR2Q9Y2Q5 125 aa7.64□□□□□ -1.19
CHMP1B-202ENST00000588284 U3KQK5 164 aa7.64□□□□□ -1.19
CHMP1B-202ENST00000588284 PPP1R17O96001 155 aa7.63□□□□□ -1.19
CHMP1B-202ENST00000588284 RRN3P1Q2M238 152 aa7.63□□□□□ -1.19
CHMP1B-202ENST00000588284 ZNF876PQ49A33 203 aa7.63□□□□□ -1.19
CHMP1B-202ENST00000588284 ZNF705AQ6ZN79 300 aaPredicted RBP7.63□□□□□ -1.19
CHMP1B-202ENST00000588284 TMEM263Q8WUH6 116 aaKnown RBP7.63□□□□□ -1.19
CHMP1B-202ENST00000588284 MRAP2Q96G30 205 aa7.63□□□□□ -1.19
CHMP1B-202ENST00000588284 PRELID3AQ96N28 172 aa7.63□□□□□ -1.19
CHMP1B-202ENST00000588284 GSN-AS1Q9NRJ2 163 aa7.63□□□□□ -1.19
CHMP1B-202ENST00000588284 A8MWV9 139 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms