RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 SMIM15Q7Z3B0 74 aa14.62□□□□□ -0.07
TRIM47-204ENST00000587339 CLUHP3Q96NS8 147 aa14.62□□□□□ -0.07
TRIM47-204ENST00000587339 IGHV1OR15-1A0A075B7D0 117 aa14.62□□□□□ -0.07
TRIM47-204ENST00000587339 M0R381 172 aa14.62□□□□□ -0.07
TRIM47-204ENST00000587339 DMRTA1Q5VZB9 504 aa14.62□□□□□ -0.07
TRIM47-204ENST00000587339 TENM1Q9UKZ4 2725 aa14.61□□□□□ -0.07
TRIM47-204ENST00000587339 D6R8Y8 96 aa14.61□□□□□ -0.07
TRIM47-204ENST00000587339 SMIM6P0DI80 62 aa14.61□□□□□ -0.07
TRIM47-204ENST00000587339 EVI2AP22794 236 aa14.61□□□□□ -0.07
TRIM47-204ENST00000587339 BEAN1Q3B7T3 259 aa14.61□□□□□ -0.07
TRIM47-204ENST00000587339 MRPL51Q4U2R6 128 aaKnown RBP14.61□□□□□ -0.07
TRIM47-204ENST00000587339 ORMDL3Q8N138 153 aa14.6□□□□□ -0.07
TRIM47-204ENST00000587339 FAM110AQ9BQ89 295 aa14.6□□□□□ -0.07
TRIM47-204ENST00000587339 SPRY2O43597 315 aa14.6□□□□□ -0.07
TRIM47-204ENST00000587339 RBMY1A1P0DJD3 496 aaKnown RBP14.6□□□□□ -0.07
TRIM47-204ENST00000587339 RBMY1CP0DJD4 496 aa14.6□□□□□ -0.07
TRIM47-204ENST00000587339 RAB4AP20338 218 aa14.6□□□□□ -0.07
TRIM47-204ENST00000587339 RBMY1FQ15415 496 aaKnown RBP14.6□□□□□ -0.07
TRIM47-204ENST00000587339 Q8N1Y9 231 aa14.6□□□□□ -0.07
TRIM47-204ENST00000587339 SAMD10Q9BYL1 202 aa14.6□□□□□ -0.07
TRIM47-204ENST00000587339 CKS2P33552 79 aa14.59□□□□□ -0.07
TRIM47-204ENST00000587339 RNF185Q96GF1 192 aa14.59□□□□□ -0.07
TRIM47-204ENST00000587339 U3KQK5 164 aa14.59□□□□□ -0.07
TRIM47-204ENST00000587339 ATRQ13535 2644 aa14.59□□□□□ -0.07
TRIM47-204ENST00000587339 INSL3P51460 131 aa14.58□□□□□ -0.07
TRIM47-204ENST00000587339 TRPT1Q86TN4 253 aaKnown RBP14.58□□□□□ -0.07
TRIM47-204ENST00000587339 IGHV3-16A0A0C4DH30 117 aa14.58□□□□□ -0.08
TRIM47-204ENST00000587339 NIT1Q86X76 327 aa14.58□□□□□ -0.08
TRIM47-204ENST00000587339 PRELID3AQ96N28 172 aa14.58□□□□□ -0.08
TRIM47-204ENST00000587339 TEP1Q99973 2627 aaKnown RBP14.58□□□□□ -0.08
TRIM47-204ENST00000587339 KRTAP24-1Q3LI83 254 aa14.57□□□□□ -0.08
TRIM47-204ENST00000587339 RNASEKQ6P5S7 137 aaKnown RBP14.57□□□□□ -0.08
TRIM47-204ENST00000587339 MDFICQ9P1T7 246 aa14.57□□□□□ -0.08
TRIM47-204ENST00000587339 CBY3A6NI87 242 aa14.56□□□□□ -0.08
TRIM47-204ENST00000587339 HSBP1O75506 76 aa14.56□□□□□ -0.08
TRIM47-204ENST00000587339 PPBPP02775 128 aa14.56□□□□□ -0.08
TRIM47-204ENST00000587339 NUTF2P61970 127 aaKnown RBP14.56□□□□□ -0.08
TRIM47-204ENST00000587339 C9orf66Q5T8R8 295 aa14.56□□□□□ -0.08
TRIM47-204ENST00000587339 TRGV11A0A075B6L2 103 aa14.56□□□□□ -0.08
TRIM47-204ENST00000587339 INSP01308 110 aa14.56□□□□□ -0.08
TRIM47-204ENST00000587339 HTN1P15515 57 aa14.56□□□□□ -0.08
TRIM47-204ENST00000587339 AMTP48728 403 aa14.56□□□□□ -0.08
TRIM47-204ENST00000587339 SPATA3Q8NHX4 192 aa14.56□□□□□ -0.08
TRIM47-204ENST00000587339 C19orf73Q9NVV2 129 aa14.56□□□□□ -0.08
TRIM47-204ENST00000587339 SMKR1H3BMG3 65 aa14.55□□□□□ -0.08
TRIM47-204ENST00000587339 NXPH4O95158 308 aa14.55□□□□□ -0.08
TRIM47-204ENST00000587339 PMCHP20382 165 aa14.55□□□□□ -0.08
TRIM47-204ENST00000587339 URB1-AS1Q96HZ7 61 aa14.55□□□□□ -0.08
TRIM47-204ENST00000587339 C9orf85Q96MD7 179 aa14.55□□□□□ -0.08
TRIM47-204ENST00000587339 C20orf144Q9BQM9 153 aa14.55□□□□□ -0.08
TRIM47-204ENST00000587339 WFDC10AQ9H1F0 79 aa14.55□□□□□ -0.08
TRIM47-204ENST00000587339 NCR2O95944 276 aa14.54□□□□□ -0.08
TRIM47-204ENST00000587339 LINC00614P0C842 121 aa14.54□□□□□ -0.08
TRIM47-204ENST00000587339 PYY3Q5JQD4 70 aa14.54□□□□□ -0.08
TRIM47-204ENST00000587339 AP1S3Q96PC3 154 aa14.54□□□□□ -0.08
TRIM47-204ENST00000587339 XCL2Q9UBD3 114 aa14.54□□□□□ -0.08
TRIM47-204ENST00000587339 FAM19A2Q8N3H0 131 aa14.54□□□□□ -0.08
TRIM47-204ENST00000587339 CHCHD1Q96BP2 118 aaKnown RBP14.54□□□□□ -0.08
TRIM47-204ENST00000587339 C14orf178Q8N769 122 aaPredicted RBP14.53□□□□□ -0.08
TRIM47-204ENST00000587339 DPH3P1Q9H4G8 78 aa14.53□□□□□ -0.08
TRIM47-204ENST00000587339 NPYP01303 97 aa14.53□□□□□ -0.08
TRIM47-204ENST00000587339 LINC00469Q8N7U9 141 aa14.53□□□□□ -0.08
TRIM47-204ENST00000587339 PRSS3P2Q8NHM4 247 aa14.53□□□□□ -0.08
TRIM47-204ENST00000587339 LINC01587Q99440 93 aa14.53□□□□□ -0.08
TRIM47-204ENST00000587339 VWFP04275 2813 aa14.52□□□□□ -0.08
TRIM47-204ENST00000587339 LINC00587B1AMM8 73 aa14.52□□□□□ -0.09
TRIM47-204ENST00000587339 LAMTOR2Q9Y2Q5 125 aa14.52□□□□□ -0.09
TRIM47-204ENST00000587339 SYT8Q8NBV8 401 aa14.51□□□□□ -0.09
TRIM47-204ENST00000587339 LOC389332A0A1B0GUA5 103 aa14.51□□□□□ -0.09
TRIM47-204ENST00000587339 GAS8-AS1O95177 125 aa14.51□□□□□ -0.09
TRIM47-204ENST00000587339 GTSCR1Q86UQ5 136 aa14.51□□□□□ -0.09
TRIM47-204ENST00000587339 TMEM208Q9BTX3 173 aa14.51□□□□□ -0.09
TRIM47-204ENST00000587339 GSN-AS1Q9NRJ2 163 aa14.51□□□□□ -0.09
TRIM47-204ENST00000587339 MUC4Q99102 2169 aa14.5□□□□□ -0.09
TRIM47-204ENST00000587339 TRAV26-2A0A0B4J265 109 aa14.5□□□□□ -0.09
TRIM47-204ENST00000587339 LINC00467Q9BRT7 94 aa14.5□□□□□ -0.09
TRIM47-204ENST00000587339 MCRIP2Q9BUT9 160 aaKnown RBP14.5□□□□□ -0.09
TRIM47-204ENST00000587339 TNFRSF6BO95407 300 aa14.49□□□□□ -0.09
TRIM47-204ENST00000587339 SMIM17P0DL12 118 aa14.49□□□□□ -0.09
TRIM47-204ENST00000587339 IFI27P40305 119 aaPredicted RBP14.49□□□□□ -0.09
TRIM47-204ENST00000587339 FA2HQ7L5A8 372 aa14.49□□□□□ -0.09
TRIM47-204ENST00000587339 MRAP2Q96G30 205 aa14.49□□□□□ -0.09
TRIM47-204ENST00000587339 AP5S1Q9NUS5 200 aa14.49□□□□□ -0.09
TRIM47-204ENST00000587339 PRM2P04554 102 aa14.49□□□□□ -0.09
TRIM47-204ENST00000587339 GATA1P15976 413 aaPredicted RBP14.49□□□□□ -0.09
TRIM47-204ENST00000587339 JOSD1Q15040 202 aaPredicted RBP14.49□□□□□ -0.09
TRIM47-204ENST00000587339 Q6ZWC4 215 aa14.49□□□□□ -0.09
TRIM47-204ENST00000587339 PRIMA1Q86XR5 153 aa14.49□□□□□ -0.09
TRIM47-204ENST00000587339 WFDC9Q8NEX5 89 aa14.49□□□□□ -0.09
TRIM47-204ENST00000587339 MGPP08493 103 aa14.48□□□□□ -0.09
TRIM47-204ENST00000587339 RPL35AP18077 110 aaKnown RBP14.48□□□□□ -0.09
TRIM47-204ENST00000587339 ZNF876PQ49A33 203 aa14.48□□□□□ -0.09
TRIM47-204ENST00000587339 ZNF747Q9BV97 191 aa14.48□□□□□ -0.09
TRIM47-204ENST00000587339 MAP1LC3AQ9H492 121 aa14.48□□□□□ -0.09
TRIM47-204ENST00000587339 PMCHL1Q16048 86 aa14.47□□□□□ -0.09
TRIM47-204ENST00000587339 C1orf158Q8N1D5 194 aa14.47□□□□□ -0.09
TRIM47-204ENST00000587339 DEFB125Q8N687 156 aa14.47□□□□□ -0.09
TRIM47-204ENST00000587339 JPT2Q9H910 190 aa14.47□□□□□ -0.09
TRIM47-204ENST00000587339 IGHV3OR16-12A0A075B7B8 117 aa14.47□□□□□ -0.09
TRIM47-204ENST00000587339 IGHV1-24A0A0C4DH33 117 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms