RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-208ENST00000587165 ZNF506Q5JVG8 444 aa3.54□□□□□ -1.84
LINC01140-208ENST00000587165 PIK3CD-AS1Q5SR53 167 aa3.54□□□□□ -1.84
LINC01140-208ENST00000587165 LCE2DQ5TA82 110 aaPredicted RBP3.54□□□□□ -1.84
LINC01140-208ENST00000587165 NFE4Q86UQ8 179 aa3.54□□□□□ -1.84
LINC01140-208ENST00000587165 SLC51BQ86UW2 128 aa3.54□□□□□ -1.84
LINC01140-208ENST00000587165 BAGE2Q86Y30 109 aa3.54□□□□□ -1.84
LINC01140-208ENST00000587165 C10orf126Q8N4M7 172 aa3.54□□□□□ -1.84
LINC01140-208ENST00000587165 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.54□□□□□ -1.84
LINC01140-208ENST00000587165 OR11H4Q8NGC9 324 aa3.54□□□□□ -1.84
LINC01140-208ENST00000587165 PTH2Q96A98 100 aa3.54□□□□□ -1.84
LINC01140-208ENST00000587165 LINC00479Q96M42 142 aa3.54□□□□□ -1.84
LINC01140-208ENST00000587165 C9orf85Q96MD7 179 aa3.54□□□□□ -1.84
LINC01140-208ENST00000587165 IL36BQ9NZH7 164 aa3.54□□□□□ -1.84
LINC01140-208ENST00000587165 GNG13Q9P2W3 67 aa3.54□□□□□ -1.84
LINC01140-208ENST00000587165 PHLDA3Q9Y5J5 127 aa3.54□□□□□ -1.84
LINC01140-208ENST00000587165 LY96Q9Y6Y9 160 aa3.54□□□□□ -1.84
LINC01140-208ENST00000587165 PLECQ15149 4684 aaKnown RBP3.53□□□□□ -1.84
LINC01140-208ENST00000587165 TRAV1-1A0A0B4J248 108 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 TRBV6-4A0A1B0GX49 114 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 SCO2A0A1W2PP80 73 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 H3BVH4 76 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 RS1O15537 224 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 SH2D1AO60880 128 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 LTAP01374 205 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 C1QBP02746 253 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 TIRAPP58753 221 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 CFAP126Q5VTH2 177 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 LYPD5Q6UWN5 251 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 ZFP2Q6ZN57 461 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 COX8CQ7Z4L0 72 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 ZFP82Q8N141 532 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 DAZAP1Q96EP5 407 aaKnown RBP3.53□□□□□ -1.84
LINC01140-208ENST00000587165 ZC2HC1AQ96GY0 325 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 BIN3Q9NQY0 253 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 C11orf21Q9P2W6 132 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 SACSQ9NZJ4 4579 aa3.53□□□□□ -1.84
LINC01140-208ENST00000587165 NACAE9PAV3 2078 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 hCG_2014768A0A024R1R8 64 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 A0A087WWC5 75 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 TMSB15BA0A087X1C1 80 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 IGHV3-73A0A0B4J1V6 119 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 IGKV3D-20A0A0C4DH25 116 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 XKRY2A2RUG3 117 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 GRIFINA4D1Z8 144 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 KRBOX1C9JBD0 128 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 M0R381 172 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 PDE6DO43924 150 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 CXCL1P09341 107 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 ARMS2P0C7Q2 107 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 MED14OSP0DP75 135 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 RNASE3P12724 160 aaKnown RBP3.52□□□□□ -1.85
LINC01140-208ENST00000587165 SULT1A2P50226 295 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 ERVFC1-1P60608 527 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 RPS20P60866 119 aaKnown RBP3.52□□□□□ -1.85
LINC01140-208ENST00000587165 ZNF674Q2M3X9 581 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 LINC01559Q495D7 138 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 C4orf48Q5BLP8 95 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 OR10J3Q5JRS4 329 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 DNLZQ5SXM8 178 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 FAM74A4Q5TZK3 123 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 PRR27Q6MZM9 219 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 KCNIP4Q6PIL6 250 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 Q6ZNX1 250 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 ATP6V0E2Q8NHE4 81 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 KRTAP3-3Q9BYR6 98 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 KRTAP3-2Q9BYR7 98 aa3.52□□□□□ -1.85
LINC01140-208ENST00000587165 IGHV3-38A0A0C4DH36 116 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 A0A1B0GVY2 172 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 PGPEP1LA6NFU8 196 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 C16orf90A8MZG2 172 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 PSCAO43653 123 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 CRYGDP07320 174 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 DNAH10OSP0CZ25 163 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 SMIM17P0DL12 118 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 BCL2P10415 239 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 RPL35P42766 123 aaKnown RBP3.51□□□□□ -1.85
LINC01140-208ENST00000587165 GNG4P50150 75 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 LINC00315P59091 139 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 BLOC1S1P78537 153 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 MEF2BQ02080 365 aaPredicted RBP3.51□□□□□ -1.85
LINC01140-208ENST00000587165 TOR2AQ5JU69 321 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 LELP1Q5T871 98 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 SPANXN1Q5VSR9 72 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 SLC25A29Q8N8R3 303 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 C11orf52Q96A22 123 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 SMIM12Q96EX1 92 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 AP1S3Q96PC3 154 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 GTSF1LQ9H1H1 148 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 PARLQ9H300 379 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 MED9Q9NWA0 146 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 MSRB1Q9NZV6 116 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 URGCP-MRPS24S4R325 110 aa3.51□□□□□ -1.85
LINC01140-208ENST00000587165 BIRC6Q9NR09 4857 aa3.5□□□□□ -1.85
LINC01140-208ENST00000587165 A0A087WWL8 130 aa3.5□□□□□ -1.85
LINC01140-208ENST00000587165 TRBV10-1A0A0K0K1A3 114 aa3.5□□□□□ -1.85
LINC01140-208ENST00000587165 LOC100131303A0A0U1RQF7 123 aa3.5□□□□□ -1.85
LINC01140-208ENST00000587165 GAGE12JA6NER3 117 aa3.5□□□□□ -1.85
LINC01140-208ENST00000587165 P01737 135 aa3.5□□□□□ -1.85
LINC01140-208ENST00000587165 PKIAP61925 76 aa3.5□□□□□ -1.85
LINC01140-208ENST00000587165 RPL36AP83881 106 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms