RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 VWFP04275 2813 aa13.76□□□□□ -0.21
RETREG3-205ENST00000586870 PKD1L1Q8TDX9 2849 aa13.76□□□□□ -0.21
RETREG3-205ENST00000586870 A0A0J9YX75 114 aa13.75□□□□□ -0.21
RETREG3-205ENST00000586870 SAP30O75446 220 aa13.75□□□□□ -0.21
RETREG3-205ENST00000586870 CKS2P33552 79 aa13.75□□□□□ -0.21
RETREG3-205ENST00000586870 EBLN2Q6P2I7 272 aa13.75□□□□□ -0.21
RETREG3-205ENST00000586870 TEX43Q6ZNM6 134 aa13.75□□□□□ -0.21
RETREG3-205ENST00000586870 SMIM15Q7Z3B0 74 aa13.75□□□□□ -0.21
RETREG3-205ENST00000586870 OR9G4Q8NGQ1 327 aa13.75□□□□□ -0.21
RETREG3-205ENST00000586870 RNF185Q96GF1 192 aa13.75□□□□□ -0.21
RETREG3-205ENST00000586870 PRO1933Q9H354 126 aa13.75□□□□□ -0.21
RETREG3-205ENST00000586870 TRAV2A0A0B4J234 112 aa13.75□□□□□ -0.21
RETREG3-205ENST00000586870 IGHV1-24A0A0C4DH33 117 aa13.75□□□□□ -0.21
RETREG3-205ENST00000586870 DUSP14O95147 198 aaKnown RBP13.75□□□□□ -0.21
RETREG3-205ENST00000586870 CSN3P07498 182 aa13.75□□□□□ -0.21
RETREG3-205ENST00000586870 Q8N976 141 aa13.75□□□□□ -0.21
RETREG3-205ENST00000586870 OR10AG1Q8NH19 301 aa13.75□□□□□ -0.21
RETREG3-205ENST00000586870 PRSS3P2Q8NHM4 247 aa13.75□□□□□ -0.21
RETREG3-205ENST00000586870 ZMAT5Q9UDW3 170 aaKnown RBP13.75□□□□□ -0.21
RETREG3-205ENST00000586870 ASIPP42127 132 aa13.74□□□□□ -0.21
RETREG3-205ENST00000586870 ANXA2RQ3ZCQ2 193 aa13.74□□□□□ -0.21
RETREG3-205ENST00000586870 FA2HQ7L5A8 372 aa13.74□□□□□ -0.21
RETREG3-205ENST00000586870 LAMTOR2Q9Y2Q5 125 aa13.74□□□□□ -0.21
RETREG3-205ENST00000586870 INSL3P51460 131 aa13.73□□□□□ -0.21
RETREG3-205ENST00000586870 SPANXN1Q5VSR9 72 aa13.73□□□□□ -0.21
RETREG3-205ENST00000586870 AP5S1Q9NUS5 200 aa13.73□□□□□ -0.21
RETREG3-205ENST00000586870 H3BVH4 76 aa13.72□□□□□ -0.21
RETREG3-205ENST00000586870 DEFA6Q01524 100 aa13.72□□□□□ -0.21
RETREG3-205ENST00000586870 BEAN1Q3B7T3 259 aa13.72□□□□□ -0.21
RETREG3-205ENST00000586870 FOXI2Q6ZQN5 318 aa13.72□□□□□ -0.21
RETREG3-205ENST00000586870 BTF3P20290 206 aaKnown RBP13.72□□□□□ -0.21
RETREG3-205ENST00000586870 S100A4P26447 101 aaKnown RBP13.72□□□□□ -0.21
RETREG3-205ENST00000586870 KIR3DS1Q14943 382 aa13.72□□□□□ -0.21
RETREG3-205ENST00000586870 SIGLEC8Q9NYZ4 499 aa13.72□□□□□ -0.21
RETREG3-205ENST00000586870 C7orf71A4D174 169 aa13.71□□□□□ -0.22
RETREG3-205ENST00000586870 LEPROTL1O95214 131 aa13.71□□□□□ -0.22
RETREG3-205ENST00000586870 DDTP30046 118 aa13.71□□□□□ -0.22
RETREG3-205ENST00000586870 TSPOP30536 169 aa13.71□□□□□ -0.22
RETREG3-205ENST00000586870 SCRT2Q9NQ03 307 aa13.71□□□□□ -0.22
RETREG3-205ENST00000586870 NPYP01303 97 aa13.7□□□□□ -0.22
RETREG3-205ENST00000586870 IFI27P40305 119 aaPredicted RBP13.7□□□□□ -0.22
RETREG3-205ENST00000586870 PMCHL1Q16048 86 aa13.7□□□□□ -0.22
RETREG3-205ENST00000586870 KIR2DL5BA0A0G2JN68 375 aa13.69□□□□□ -0.22
RETREG3-205ENST00000586870 KIR2DL5BA0A0G2JPC4 375 aa13.69□□□□□ -0.22
RETREG3-205ENST00000586870 SMKR1H3BMG3 65 aa13.69□□□□□ -0.22
RETREG3-205ENST00000586870 FAM159AQ6UWV7 190 aa13.69□□□□□ -0.22
RETREG3-205ENST00000586870 KIR2DL5AQ8N109 375 aa13.69□□□□□ -0.22
RETREG3-205ENST00000586870 MAP1LC3AQ9H492 121 aa13.69□□□□□ -0.22
RETREG3-205ENST00000586870 HSPB8Q9UJY1 196 aa13.69□□□□□ -0.22
RETREG3-205ENST00000586870 LOC389332A0A1B0GUA5 103 aa13.68□□□□□ -0.22
RETREG3-205ENST00000586870 NCR2O95944 276 aa13.68□□□□□ -0.22
RETREG3-205ENST00000586870 EVI2AP22794 236 aa13.68□□□□□ -0.22
RETREG3-205ENST00000586870 KPRPQ5T749 579 aaPredicted RBP13.68□□□□□ -0.22
RETREG3-205ENST00000586870 DYNLRB2Q8TF09 96 aa13.68□□□□□ -0.22
RETREG3-205ENST00000586870 TMEM70Q9BUB7 260 aa13.68□□□□□ -0.22
RETREG3-205ENST00000586870 VAMP8Q9BV40 100 aa13.68□□□□□ -0.22
RETREG3-205ENST00000586870 PHLDA3Q9Y5J5 127 aa13.68□□□□□ -0.22
RETREG3-205ENST00000586870 GNRH2O43555 120 aa13.68□□□□□ -0.22
RETREG3-205ENST00000586870 TIMM8BQ9Y5J9 83 aaPredicted RBP13.68□□□□□ -0.22
RETREG3-205ENST00000586870 CMYA5Q8N3K9 4069 aa13.67□□□□□ -0.22
RETREG3-205ENST00000586870 PRB2P02812 416 aaPredicted RBP13.67□□□□□ -0.22
RETREG3-205ENST00000586870 CDKN1BP46527 198 aa13.67□□□□□ -0.22
RETREG3-205ENST00000586870 DEFB114Q30KQ6 69 aa13.67□□□□□ -0.22
RETREG3-205ENST00000586870 TDRG1Q3Y452 100 aa13.67□□□□□ -0.22
RETREG3-205ENST00000586870 C20orf144Q9BQM9 153 aa13.67□□□□□ -0.22
RETREG3-205ENST00000586870 NOTCH3Q9UM47 2321 aa13.66□□□□□ -0.22
RETREG3-205ENST00000586870 TRAV12-3A0A0B4J271 114 aa13.66□□□□□ -0.22
RETREG3-205ENST00000586870 CRXO43186 299 aaPredicted RBP13.66□□□□□ -0.22
RETREG3-205ENST00000586870 WIPF1O43516 503 aa13.66□□□□□ -0.22
RETREG3-205ENST00000586870 TNFRSF6BO95407 300 aa13.66□□□□□ -0.22
RETREG3-205ENST00000586870 RNASE3P12724 160 aaKnown RBP13.66□□□□□ -0.22
RETREG3-205ENST00000586870 TMEM61Q8N0U2 210 aa13.66□□□□□ -0.22
RETREG3-205ENST00000586870 TRAV25A0A0B4J276 109 aa13.65□□□□□ -0.22
RETREG3-205ENST00000586870 A8MTW9 85 aa13.65□□□□□ -0.22
RETREG3-205ENST00000586870 KRTAP10-11P60412 298 aa13.65□□□□□ -0.22
RETREG3-205ENST00000586870 EGFEM1PQ0D2K5 195 aa13.65□□□□□ -0.22
RETREG3-205ENST00000586870 MRAP2Q96G30 205 aa13.65□□□□□ -0.22
RETREG3-205ENST00000586870 MAP1LC3CQ9BXW4 147 aa13.65□□□□□ -0.22
RETREG3-205ENST00000586870 MEGF8Q7Z7M0 2845 aa13.65□□□□□ -0.22
RETREG3-205ENST00000586870 LINC01546A6NGU7 62 aa13.64□□□□□ -0.23
RETREG3-205ENST00000586870 PRSS47A8MTI9 375 aa13.64□□□□□ -0.23
RETREG3-205ENST00000586870 SYS1-DBNDD2H3BUS1 97 aa13.64□□□□□ -0.23
RETREG3-205ENST00000586870 M0R381 172 aa13.64□□□□□ -0.23
RETREG3-205ENST00000586870 NXPH4O95158 308 aa13.64□□□□□ -0.23
RETREG3-205ENST00000586870 IGKV3-20P01619 116 aa13.64□□□□□ -0.23
RETREG3-205ENST00000586870 DEFB131AP59861 70 aa13.64□□□□□ -0.23
RETREG3-205ENST00000586870 AMTNQ6UX39 209 aa13.64□□□□□ -0.23
RETREG3-205ENST00000586870 LINC00173Q6ZV60 143 aa13.64□□□□□ -0.23
RETREG3-205ENST00000586870 OR2K2Q8NGT1 345 aa13.64□□□□□ -0.23
RETREG3-205ENST00000586870 DPH3P1Q9H4G8 78 aa13.64□□□□□ -0.23
RETREG3-205ENST00000586870 NXT2Q9NPJ8 142 aaKnown RBP13.64□□□□□ -0.23
RETREG3-205ENST00000586870 C20orf202A1L168 122 aa13.64□□□□□ -0.23
RETREG3-205ENST00000586870 PET117Q6UWS5 81 aa13.64□□□□□ -0.23
RETREG3-205ENST00000586870 DEFB125Q8N687 156 aa13.64□□□□□ -0.23
RETREG3-205ENST00000586870 OR4C46A6NHA9 309 aa13.63□□□□□ -0.23
RETREG3-205ENST00000586870 HLA-DRB4P13762 266 aa13.63□□□□□ -0.23
RETREG3-205ENST00000586870 SPAG8Q99932 426 aaPredicted RBP13.63□□□□□ -0.23
RETREG3-205ENST00000586870 NDUFAF3Q9BU61 184 aa13.63□□□□□ -0.23
RETREG3-205ENST00000586870 ZNF256Q9Y2P7 627 aaPredicted RBP13.63□□□□□ -0.23
RETREG3-205ENST00000586870 PAM16Q9Y3D7 125 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms