RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 DEFB131BA0A096LNP1 70 aa10.37□□□□□ -0.75
SCAMP4-209ENST00000585335 GATCO43716 136 aaKnown RBP10.37□□□□□ -0.75
SCAMP4-209ENST00000585335 ARMS2P0C7Q2 107 aa10.37□□□□□ -0.75
SCAMP4-209ENST00000585335 RNASE3P12724 160 aaKnown RBP10.37□□□□□ -0.75
SCAMP4-209ENST00000585335 HTN3P15516 51 aa10.37□□□□□ -0.75
SCAMP4-209ENST00000585335 RASL10AQ92737 203 aa10.37□□□□□ -0.75
SCAMP4-209ENST00000585335 PTH2Q96A98 100 aa10.37□□□□□ -0.75
SCAMP4-209ENST00000585335 RNASE7Q9H1E1 156 aaKnown RBP10.37□□□□□ -0.75
SCAMP4-209ENST00000585335 KLK5Q9Y337 293 aaPredicted RBP10.37□□□□□ -0.75
SCAMP4-209ENST00000585335 RPL23P62829 140 aaKnown RBP10.36□□□□□ -0.75
SCAMP4-209ENST00000585335 ZNF876PQ49A33 203 aa10.36□□□□□ -0.75
SCAMP4-209ENST00000585335 ZFAND6Q6FIF0 208 aa10.36□□□□□ -0.75
SCAMP4-209ENST00000585335 CEMP1Q6PRD7 247 aaPredicted RBP10.36□□□□□ -0.75
SCAMP4-209ENST00000585335 C18orf15Q96N68 181 aa10.36□□□□□ -0.75
SCAMP4-209ENST00000585335 A0A1W2PPQ1 181 aa10.35□□□□□ -0.75
SCAMP4-209ENST00000585335 PNRC1Q12796 327 aaPredicted RBP10.35□□□□□ -0.75
SCAMP4-209ENST00000585335 PIK3CD-AS1Q5SR53 167 aa10.35□□□□□ -0.75
SCAMP4-209ENST00000585335 ZFP82Q8N141 532 aa10.35□□□□□ -0.75
SCAMP4-209ENST00000585335 FER1L6-AS1Q8NA97 138 aa10.35□□□□□ -0.75
SCAMP4-209ENST00000585335 ISOC2Q96AB3 205 aa10.35□□□□□ -0.75
SCAMP4-209ENST00000585335 OSTCQ9NRP0 149 aa10.35□□□□□ -0.75
SCAMP4-209ENST00000585335 TMEM218A2RU14 115 aa10.34□□□□□ -0.75
SCAMP4-209ENST00000585335 A8MWL6 223 aa10.34□□□□□ -0.75
SCAMP4-209ENST00000585335 F5H768 121 aa10.34□□□□□ -0.75
SCAMP4-209ENST00000585335 OR5AL1P0C617 328 aa10.34□□□□□ -0.75
SCAMP4-209ENST00000585335 CT83Q5H943 113 aa10.34□□□□□ -0.75
SCAMP4-209ENST00000585335 SFRP2Q96HF1 295 aa10.34□□□□□ -0.75
SCAMP4-209ENST00000585335 TPPP3Q9BW30 176 aa10.34□□□□□ -0.75
SCAMP4-209ENST00000585335 SCRT2Q9NQ03 307 aa10.34□□□□□ -0.75
SCAMP4-209ENST00000585335 TRAV4A0A0B4J268 109 aa10.33□□□□□ -0.76
SCAMP4-209ENST00000585335 F2Z2F3 143 aa10.33□□□□□ -0.76
SCAMP4-209ENST00000585335 F8W036 122 aa10.33□□□□□ -0.76
SCAMP4-209ENST00000585335 M0R381 172 aa10.33□□□□□ -0.76
SCAMP4-209ENST00000585335 SPANXN1Q5VSR9 72 aa10.33□□□□□ -0.76
SCAMP4-209ENST00000585335 OR4C5Q8NGB2 326 aa10.33□□□□□ -0.76
SCAMP4-209ENST00000585335 OR10G8Q8NGN5 311 aa10.33□□□□□ -0.76
SCAMP4-209ENST00000585335 FAM210BQ96KR6 192 aa10.33□□□□□ -0.76
SCAMP4-209ENST00000585335 A8MWV9 139 aa10.32□□□□□ -0.76
SCAMP4-209ENST00000585335 SNAI2O43623 268 aa10.32□□□□□ -0.76
SCAMP4-209ENST00000585335 CIDEAO60543 219 aa10.32□□□□□ -0.76
SCAMP4-209ENST00000585335 GZMBP10144 247 aa10.32□□□□□ -0.76
SCAMP4-209ENST00000585335 CACNG7P62955 275 aa10.32□□□□□ -0.76
SCAMP4-209ENST00000585335 SSBP4Q9BWG4 385 aaPredicted RBP10.32□□□□□ -0.76
SCAMP4-209ENST00000585335 TRGV4A0A0C4DH28 118 aa10.31□□□□□ -0.76
SCAMP4-209ENST00000585335 IGHV3-53P01767 116 aa10.31□□□□□ -0.76
SCAMP4-209ENST00000585335 IGLC6P0CF74 106 aa10.31□□□□□ -0.76
SCAMP4-209ENST00000585335 SLAQ13239 276 aa10.31□□□□□ -0.76
SCAMP4-209ENST00000585335 CASC10Q5T4H9 136 aa10.31□□□□□ -0.76
SCAMP4-209ENST00000585335 BORCS7Q96B45 105 aa10.31□□□□□ -0.76
SCAMP4-209ENST00000585335 SEC11CQ9BY50 192 aa10.31□□□□□ -0.76
SCAMP4-209ENST00000585335 IGLL5B9A064 214 aa10.3□□□□□ -0.76
SCAMP4-209ENST00000585335 RHODO00212 210 aa10.3□□□□□ -0.76
SCAMP4-209ENST00000585335 PPP1R2P9O14990 202 aa10.3□□□□□ -0.76
SCAMP4-209ENST00000585335 TCTAP57738 103 aa10.3□□□□□ -0.76
SCAMP4-209ENST00000585335 ZNF575Q86XF7 245 aa10.3□□□□□ -0.76
SCAMP4-209ENST00000585335 OR10AG1Q8NH19 301 aa10.3□□□□□ -0.76
SCAMP4-209ENST00000585335 TSKUQ8WUA8 353 aa10.3□□□□□ -0.76
SCAMP4-209ENST00000585335 GFRA4Q9GZZ7 299 aa10.3□□□□□ -0.76
SCAMP4-209ENST00000585335 FAM231BA6NCW3 169 aa10.29□□□□□ -0.76
SCAMP4-209ENST00000585335 RS1O15537 224 aa10.29□□□□□ -0.76
SCAMP4-209ENST00000585335 NXPH4O95158 308 aa10.29□□□□□ -0.76
SCAMP4-209ENST00000585335 MT-ND4LP03901 98 aa10.29□□□□□ -0.76
SCAMP4-209ENST00000585335 CTRLP40313 264 aa10.29□□□□□ -0.76
SCAMP4-209ENST00000585335 CFAP126Q5VTH2 177 aa10.29□□□□□ -0.76
SCAMP4-209ENST00000585335 DMRTA1Q5VZB9 504 aa10.29□□□□□ -0.76
SCAMP4-209ENST00000585335 LYZL1Q6UWQ5 148 aa10.29□□□□□ -0.76
SCAMP4-209ENST00000585335 IGHV4-4A0A075B6R2 117 aa10.28□□□□□ -0.76
SCAMP4-209ENST00000585335 SMIM17P0DL12 118 aa10.28□□□□□ -0.76
SCAMP4-209ENST00000585335 NDUFA5Q16718 116 aa10.28□□□□□ -0.76
SCAMP4-209ENST00000585335 WDR73Q6P4I2 378 aa10.28□□□□□ -0.76
SCAMP4-209ENST00000585335 TMEM88Q6PEY1 159 aa10.28□□□□□ -0.76
SCAMP4-209ENST00000585335 ZFP2Q6ZN57 461 aa10.28□□□□□ -0.76
SCAMP4-209ENST00000585335 ZNF479Q96JC4 524 aa10.28□□□□□ -0.76
SCAMP4-209ENST00000585335 AP1S3Q96PC3 154 aa10.28□□□□□ -0.76
SCAMP4-209ENST00000585335 PRO0255Q9UI72 69 aa10.28□□□□□ -0.76
SCAMP4-209ENST00000585335 V9GYV3 84 aa10.28□□□□□ -0.76
SCAMP4-209ENST00000585335 MUC21A0A0G2JKD1 596 aa10.27□□□□□ -0.77
SCAMP4-209ENST00000585335 MUC21A0A140T8X8 626 aa10.27□□□□□ -0.77
SCAMP4-209ENST00000585335 TRGC1P0CF51 173 aa10.27□□□□□ -0.77
SCAMP4-209ENST00000585335 HOXA5P20719 270 aa10.27□□□□□ -0.77
SCAMP4-209ENST00000585335 SSTP61278 116 aa10.27□□□□□ -0.77
SCAMP4-209ENST00000585335 C15orf53Q8NAA6 179 aa10.27□□□□□ -0.77
SCAMP4-209ENST00000585335 ANAPC16Q96DE5 110 aa10.27□□□□□ -0.77
SCAMP4-209ENST00000585335 HHLA3Q9XRX5 114 aa10.27□□□□□ -0.77
SCAMP4-209ENST00000585335 MUC4Q99102 2169 aa10.26□□□□□ -0.77
SCAMP4-209ENST00000585335 TRAV26-1A0A087WT03 109 aa10.26□□□□□ -0.77
SCAMP4-209ENST00000585335 PAX4O43316 350 aa10.26□□□□□ -0.77
SCAMP4-209ENST00000585335 ADCYAP1P18509 176 aa10.26□□□□□ -0.77
SCAMP4-209ENST00000585335 FHL2Q14192 279 aa10.26□□□□□ -0.77
SCAMP4-209ENST00000585335 FAM74A4Q5TZK3 123 aa10.26□□□□□ -0.77
SCAMP4-209ENST00000585335 SMIM15Q7Z3B0 74 aa10.26□□□□□ -0.77
SCAMP4-209ENST00000585335 POM121L12Q8N7R1 296 aa10.26□□□□□ -0.77
SCAMP4-209ENST00000585335 GTSF1Q8WW33 167 aa10.26□□□□□ -0.77
SCAMP4-209ENST00000585335 PGLYRP4Q96LB8 373 aa10.26□□□□□ -0.77
SCAMP4-209ENST00000585335 NAT8BQ9UHF3 227 aa10.26□□□□□ -0.77
SCAMP4-209ENST00000585335 IGHV3-73A0A0B4J1V6 119 aa10.25□□□□□ -0.77
SCAMP4-209ENST00000585335 HIGD1CA8MV81 97 aa10.25□□□□□ -0.77
SCAMP4-209ENST00000585335 H3BNG1 76 aa10.25□□□□□ -0.77
SCAMP4-209ENST00000585335 FOXA3P55318 350 aaPredicted RBP10.25□□□□□ -0.77
SCAMP4-209ENST00000585335 TWIST1Q15672 202 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms