RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 A0A1B0GV50 99 aa8.54□□□□□ -1.04
SS18-225ENST00000585121 ORM1P02763 201 aa8.54□□□□□ -1.04
SS18-225ENST00000585121 PFN1P07737 140 aaKnown RBP8.54□□□□□ -1.04
SS18-225ENST00000585121 FGF8P55075 233 aaPredicted RBP8.54□□□□□ -1.04
SS18-225ENST00000585121 UBE2G2P60604 165 aa8.54□□□□□ -1.04
SS18-225ENST00000585121 SRSF3P84103 164 aaKnown RBP8.54□□□□□ -1.04
SS18-225ENST00000585121 TOR2AQ5JU69 321 aa8.54□□□□□ -1.04
SS18-225ENST00000585121 NEGR1Q7Z3B1 354 aa8.54□□□□□ -1.04
SS18-225ENST00000585121 TXNDC17Q9BRA2 123 aa8.54□□□□□ -1.04
SS18-225ENST00000585121 MANBALQ9NQG1 85 aa8.54□□□□□ -1.04
SS18-225ENST00000585121 C9JCJ5 164 aa8.54□□□□□ -1.04
SS18-225ENST00000585121 SIVA1O15304 175 aa8.54□□□□□ -1.04
SS18-225ENST00000585121 BCL2P10415 239 aa8.54□□□□□ -1.04
SS18-225ENST00000585121 BTF3P20290 206 aaKnown RBP8.54□□□□□ -1.04
SS18-225ENST00000585121 SRIP30626 198 aa8.54□□□□□ -1.04
SS18-225ENST00000585121 HIST1H2BAQ96A08 127 aa8.54□□□□□ -1.04
SS18-225ENST00000585121 GNG13Q9P2W3 67 aa8.54□□□□□ -1.04
SS18-225ENST00000585121 VAX2Q9UIW0 290 aa8.54□□□□□ -1.04
SS18-225ENST00000585121 HERC2O95714 4834 aa8.53□□□□□ -1.04
SS18-225ENST00000585121 DYNC1H1Q14204 4646 aaKnown RBP8.53□□□□□ -1.04
SS18-225ENST00000585121 NXPH4O95158 308 aa8.53□□□□□ -1.04
SS18-225ENST00000585121 IGLV2-11P01706 119 aa8.53□□□□□ -1.04
SS18-225ENST00000585121 SEC11CQ9BY50 192 aa8.53□□□□□ -1.04
SS18-225ENST00000585121 ARL2-SNX15V9GYD0 113 aa8.53□□□□□ -1.04
SS18-225ENST00000585121 TRAV34A0A0B4J273 112 aa8.52□□□□□ -1.05
SS18-225ENST00000585121 FAM74A7A6NL05 159 aa8.52□□□□□ -1.05
SS18-225ENST00000585121 K7EQD1 137 aa8.52□□□□□ -1.05
SS18-225ENST00000585121 PEX7O00628 323 aa8.52□□□□□ -1.05
SS18-225ENST00000585121 CIDEAO60543 219 aa8.52□□□□□ -1.05
SS18-225ENST00000585121 GYPEP15421 78 aa8.52□□□□□ -1.05
SS18-225ENST00000585121 ZNF80P51504 273 aaPredicted RBP8.52□□□□□ -1.05
SS18-225ENST00000585121 TNP2Q05952 138 aa8.52□□□□□ -1.05
SS18-225ENST00000585121 ZNF876PQ49A33 203 aa8.52□□□□□ -1.05
SS18-225ENST00000585121 C10orf91Q5T1B1 145 aa8.52□□□□□ -1.05
SS18-225ENST00000585121 LYPD5Q6UWN5 251 aa8.52□□□□□ -1.05
SS18-225ENST00000585121 FABP5P3A8MUU1 101 aa8.51□□□□□ -1.05
SS18-225ENST00000585121 C9JQL5 133 aa8.51□□□□□ -1.05
SS18-225ENST00000585121 SRP19P09132 144 aaKnown RBP8.51□□□□□ -1.05
SS18-225ENST00000585121 MED14OSP0DP75 135 aa8.51□□□□□ -1.05
SS18-225ENST00000585121 S100A4P26447 101 aaKnown RBP8.51□□□□□ -1.05
SS18-225ENST00000585121 MEF2BQ02080 365 aaPredicted RBP8.51□□□□□ -1.05
SS18-225ENST00000585121 SH2D6Q7Z4S9 175 aa8.51□□□□□ -1.05
SS18-225ENST00000585121 LINC00479Q96M42 142 aa8.51□□□□□ -1.05
SS18-225ENST00000585121 TCEAL7Q9BRU2 100 aa8.51□□□□□ -1.05
SS18-225ENST00000585121 C11orf21Q9P2W6 132 aa8.51□□□□□ -1.05
SS18-225ENST00000585121 TRAV9-2A0A087WT02 112 aa8.5□□□□□ -1.05
SS18-225ENST00000585121 F8W036 122 aa8.5□□□□□ -1.05
SS18-225ENST00000585121 UBE2G1P62253 170 aa8.5□□□□□ -1.05
SS18-225ENST00000585121 CST9LP1Q5W188 147 aa8.5□□□□□ -1.05
SS18-225ENST00000585121 CARHSP1Q9Y2V2 147 aaKnown RBP8.5□□□□□ -1.05
SS18-225ENST00000585121 TMEM250H0YL14 139 aa8.49□□□□□ -1.05
SS18-225ENST00000585121 PAGE4O60829 102 aa8.49□□□□□ -1.05
SS18-225ENST00000585121 Q86TA4 180 aa8.49□□□□□ -1.05
SS18-225ENST00000585121 PTH2Q96A98 100 aa8.49□□□□□ -1.05
SS18-225ENST00000585121 FMC1Q96HJ9 113 aa8.49□□□□□ -1.05
SS18-225ENST00000585121 PRADC1Q9BSG0 188 aa8.49□□□□□ -1.05
SS18-225ENST00000585121 KRTAP1-5Q9BYS1 174 aa8.49□□□□□ -1.05
SS18-225ENST00000585121 ZFP30Q9Y2G7 519 aa8.49□□□□□ -1.05
SS18-225ENST00000585121 RS1O15537 224 aa8.49□□□□□ -1.05
SS18-225ENST00000585121 PDE6DO43924 150 aa8.49□□□□□ -1.05
SS18-225ENST00000585121 GATA1P15976 413 aaPredicted RBP8.49□□□□□ -1.05
SS18-225ENST00000585121 ASIPP42127 132 aa8.49□□□□□ -1.05
SS18-225ENST00000585121 NHLRC2Q8NBF2 726 aa8.49□□□□□ -1.05
SS18-225ENST00000585121 C9orf85Q96MD7 179 aa8.49□□□□□ -1.05
SS18-225ENST00000585121 LY96Q9Y6Y9 160 aa8.49□□□□□ -1.05
SS18-225ENST00000585121 KIAA1109Q2LD37 5005 aa8.49□□□□□ -1.05
SS18-225ENST00000585121 B4DEV8 164 aa8.48□□□□□ -1.05
SS18-225ENST00000585121 APOC3P02656 99 aa8.48□□□□□ -1.05
SS18-225ENST00000585121 EVI2AP22794 236 aa8.48□□□□□ -1.05
SS18-225ENST00000585121 CFAP126Q5VTH2 177 aa8.48□□□□□ -1.05
SS18-225ENST00000585121 SVBPQ8N300 66 aa8.48□□□□□ -1.05
SS18-225ENST00000585121 PGPEP1LA6NFU8 196 aa8.47□□□□□ -1.05
SS18-225ENST00000585121 C16orf90A8MZG2 172 aa8.47□□□□□ -1.05
SS18-225ENST00000585121 K7EP13 123 aa8.47□□□□□ -1.05
SS18-225ENST00000585121 ADCYAP1P18509 176 aa8.47□□□□□ -1.05
SS18-225ENST00000585121 AKR1C3P42330 323 aa8.47□□□□□ -1.05
SS18-225ENST00000585121 LINC00315P59091 139 aa8.47□□□□□ -1.05
SS18-225ENST00000585121 RHOHQ15669 191 aa8.47□□□□□ -1.05
SS18-225ENST00000585121 FAM74A3Q4VXF1 159 aa8.47□□□□□ -1.05
SS18-225ENST00000585121 FAM162BQ5T6X4 162 aa8.47□□□□□ -1.05
SS18-225ENST00000585121 NFE4Q86UQ8 179 aa8.47□□□□□ -1.05
SS18-225ENST00000585121 ZNF575Q86XF7 245 aa8.47□□□□□ -1.05
SS18-225ENST00000585121 IGHV3-73A0A0B4J1V6 119 aa8.46□□□□□ -1.05
SS18-225ENST00000585121 IGKV3D-20A0A0C4DH25 116 aa8.46□□□□□ -1.05
SS18-225ENST00000585121 TRBV6-4A0A1B0GX49 114 aa8.46□□□□□ -1.05
SS18-225ENST00000585121 A8MWV9 139 aa8.46□□□□□ -1.05
SS18-225ENST00000585121 S100A9P06702 114 aaKnown RBP8.46□□□□□ -1.05
SS18-225ENST00000585121 RNASE3P12724 160 aaKnown RBP8.46□□□□□ -1.05
SS18-225ENST00000585121 SLC25A29Q8N8R3 303 aa8.46□□□□□ -1.05
SS18-225ENST00000585121 SYT8Q8NBV8 401 aa8.46□□□□□ -1.05
SS18-225ENST00000585121 TRBV6-1A0A0K0K1D8 114 aa8.45□□□□□ -1.06
SS18-225ENST00000585121 LOC100131303A0A0U1RQF7 123 aa8.45□□□□□ -1.06
SS18-225ENST00000585121 EREGO14944 169 aa8.45□□□□□ -1.06
SS18-225ENST00000585121 SH2D1AO60880 128 aa8.45□□□□□ -1.06
SS18-225ENST00000585121 SNAPINO95295 136 aa8.45□□□□□ -1.06
SS18-225ENST00000585121 MGST1P10620 155 aaKnown RBP8.45□□□□□ -1.06
SS18-225ENST00000585121 TIRAPP58753 221 aa8.45□□□□□ -1.06
SS18-225ENST00000585121 PIK3CD-AS1Q5SR53 167 aa8.45□□□□□ -1.06
SS18-225ENST00000585121 COX8CQ7Z4L0 72 aa8.45□□□□□ -1.06
SS18-225ENST00000585121 ZC2HC1AQ96GY0 325 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms