RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 TRBV6-4A0A1B0GX49 114 aa13.74□□□□□ -0.21
TOP3A-219ENST00000584887 IFNA7P01567 189 aa13.74□□□□□ -0.21
TOP3A-219ENST00000584887 XGP55808 180 aa13.74□□□□□ -0.21
TOP3A-219ENST00000584887 RPL7L1Q6DKI1 246 aaKnown RBP13.74□□□□□ -0.21
TOP3A-219ENST00000584887 BORCS7-ASMTA0A0B4J1R7 106 aa13.73□□□□□ -0.21
TOP3A-219ENST00000584887 CIDEAO60543 219 aa13.73□□□□□ -0.21
TOP3A-219ENST00000584887 RNASE3P12724 160 aaKnown RBP13.73□□□□□ -0.21
TOP3A-219ENST00000584887 GCSHP23434 173 aa13.73□□□□□ -0.21
TOP3A-219ENST00000584887 S100A4P26447 101 aaKnown RBP13.73□□□□□ -0.21
TOP3A-219ENST00000584887 UBE2G2P60604 165 aa13.73□□□□□ -0.21
TOP3A-219ENST00000584887 SAPCD1Q5SSQ6 148 aa13.73□□□□□ -0.21
TOP3A-219ENST00000584887 LINC00479Q96M42 142 aa13.73□□□□□ -0.21
TOP3A-219ENST00000584887 GIPP09681 153 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-219ENST00000584887 ATP6V0E2Q8NHE4 81 aa13.72□□□□□ -0.21
TOP3A-219ENST00000584887 BATF3Q9NR55 127 aa13.72□□□□□ -0.21
TOP3A-219ENST00000584887 IGLV5-52A0A0A0MRZ9 124 aa13.71□□□□□ -0.21
TOP3A-219ENST00000584887 A0A1W2PRE2 83 aa13.71□□□□□ -0.21
TOP3A-219ENST00000584887 IBA57-AS1B1ANH7 110 aa13.71□□□□□ -0.21
TOP3A-219ENST00000584887 MGST1P10620 155 aaKnown RBP13.71□□□□□ -0.21
TOP3A-219ENST00000584887 LGALSLQ3ZCW2 172 aaPredicted RBP13.71□□□□□ -0.21
TOP3A-219ENST00000584887 LELP1Q5T871 98 aa13.71□□□□□ -0.21
TOP3A-219ENST00000584887 FRZBQ92765 325 aa13.71□□□□□ -0.21
TOP3A-219ENST00000584887 GTSF1LQ9H1H1 148 aa13.71□□□□□ -0.21
TOP3A-219ENST00000584887 ARL2-SNX15V9GYD0 113 aa13.71□□□□□ -0.21
TOP3A-219ENST00000584887 ASIPP42127 132 aa13.7□□□□□ -0.22
TOP3A-219ENST00000584887 HAMPP81172 84 aa13.7□□□□□ -0.22
TOP3A-219ENST00000584887 ZNF726P1Q15940 193 aa13.7□□□□□ -0.22
TOP3A-219ENST00000584887 Q5VSD8 79 aa13.7□□□□□ -0.22
TOP3A-219ENST00000584887 PTH2Q96A98 100 aa13.7□□□□□ -0.22
TOP3A-219ENST00000584887 CTXND1A0A1B0GTU2 59 aa13.69□□□□□ -0.22
TOP3A-219ENST00000584887 RNF222A6NCQ9 220 aa13.69□□□□□ -0.22
TOP3A-219ENST00000584887 GAGE12JA6NER3 117 aa13.69□□□□□ -0.22
TOP3A-219ENST00000584887 INAFM2P0DMQ5 153 aa13.69□□□□□ -0.22
TOP3A-219ENST00000584887 FGF8P55075 233 aaPredicted RBP13.69□□□□□ -0.22
TOP3A-219ENST00000584887 GAGE1Q13065 139 aa13.69□□□□□ -0.22
TOP3A-219ENST00000584887 GAGE4Q13068 117 aa13.69□□□□□ -0.22
TOP3A-219ENST00000584887 GAGE5Q13069 117 aa13.69□□□□□ -0.22
TOP3A-219ENST00000584887 GAGE13Q4V321 117 aa13.69□□□□□ -0.22
TOP3A-219ENST00000584887 PARLQ9H300 379 aa13.69□□□□□ -0.22
TOP3A-219ENST00000584887 BOLA1Q9Y3E2 137 aa13.69□□□□□ -0.22
TOP3A-219ENST00000584887 IGKV3D-20A0A0C4DH25 116 aa13.68□□□□□ -0.22
TOP3A-219ENST00000584887 LRCOL1A6NCL2 159 aa13.68□□□□□ -0.22
TOP3A-219ENST00000584887 PEX7O00628 323 aa13.68□□□□□ -0.22
TOP3A-219ENST00000584887 AKR1C8PQ5T2L2 129 aa13.68□□□□□ -0.22
TOP3A-219ENST00000584887 Q6ZSN1 163 aa13.68□□□□□ -0.22
TOP3A-219ENST00000584887 Q86TA4 180 aa13.68□□□□□ -0.22
TOP3A-219ENST00000584887 FABP5P3A8MUU1 101 aa13.67□□□□□ -0.22
TOP3A-219ENST00000584887 A8MWV9 139 aa13.67□□□□□ -0.22
TOP3A-219ENST00000584887 H3BVH4 76 aa13.67□□□□□ -0.22
TOP3A-219ENST00000584887 SMR3BP02814 79 aaPredicted RBP13.67□□□□□ -0.22
TOP3A-219ENST00000584887 Q8N3U1 123 aa13.67□□□□□ -0.22
TOP3A-219ENST00000584887 OR2T35Q8NGX2 323 aa13.67□□□□□ -0.22
TOP3A-219ENST00000584887 B4DEV8 164 aa13.66□□□□□ -0.22
TOP3A-219ENST00000584887 M0R036 132 aa13.66□□□□□ -0.22
TOP3A-219ENST00000584887 NTN5Q8WTR8 489 aaPredicted RBP13.66□□□□□ -0.22
TOP3A-219ENST00000584887 JPT2Q9H910 190 aa13.66□□□□□ -0.22
TOP3A-219ENST00000584887 ZFP2Q6ZN57 461 aa13.65□□□□□ -0.22
TOP3A-219ENST00000584887 Q8N814 137 aa13.65□□□□□ -0.22
TOP3A-219ENST00000584887 FAM74A7A6NL05 159 aa13.64□□□□□ -0.23
TOP3A-219ENST00000584887 SAMD10Q9BYL1 202 aa13.64□□□□□ -0.23
TOP3A-219ENST00000584887 GRIFINA4D1Z8 144 aa13.63□□□□□ -0.23
TOP3A-219ENST00000584887 MAP1LC3B2A6NCE7 125 aa13.63□□□□□ -0.23
TOP3A-219ENST00000584887 FAM74A4Q5TZK3 123 aa13.63□□□□□ -0.23
TOP3A-219ENST00000584887 C14orf178Q8N769 122 aaPredicted RBP13.63□□□□□ -0.23
TOP3A-219ENST00000584887 SYT8Q8NBV8 401 aa13.63□□□□□ -0.23
TOP3A-219ENST00000584887 HIST1H2BAQ96A08 127 aa13.63□□□□□ -0.23
TOP3A-219ENST00000584887 ZC2HC1AQ96GY0 325 aa13.63□□□□□ -0.23
TOP3A-219ENST00000584887 TM2D2Q9BX73 214 aa13.63□□□□□ -0.23
TOP3A-219ENST00000584887 MAP1LC3BQ9GZQ8 125 aa13.63□□□□□ -0.23
TOP3A-219ENST00000584887 IL36BQ9NZH7 164 aa13.63□□□□□ -0.23
TOP3A-219ENST00000584887 DMBT1Q9UGM3 2413 aaPredicted RBP13.63□□□□□ -0.23
TOP3A-219ENST00000584887 SH2D1AO60880 128 aa13.62□□□□□ -0.23
TOP3A-219ENST00000584887 LAGE3Q14657 143 aa13.62□□□□□ -0.23
TOP3A-219ENST00000584887 PIK3CD-AS1Q5SR53 167 aa13.62□□□□□ -0.23
TOP3A-219ENST00000584887 OR11H4Q8NGC9 324 aa13.62□□□□□ -0.23
TOP3A-219ENST00000584887 NKX6-2Q9C056 277 aaPredicted RBP13.62□□□□□ -0.23
TOP3A-219ENST00000584887 Q9UF83 564 aa13.62□□□□□ -0.23
TOP3A-219ENST00000584887 FLG2Q5D862 2391 aaPredicted RBP13.61□□□□□ -0.23
TOP3A-219ENST00000584887 TMSB15BA0A087X1C1 80 aa13.61□□□□□ -0.23
TOP3A-219ENST00000584887 ARMS2P0C7Q2 107 aa13.61□□□□□ -0.23
TOP3A-219ENST00000584887 LINC00694P0DN24 101 aa13.61□□□□□ -0.23
TOP3A-219ENST00000584887 UBE2G1P62253 170 aa13.61□□□□□ -0.23
TOP3A-219ENST00000584887 FAM162BQ5T6X4 162 aa13.61□□□□□ -0.23
TOP3A-219ENST00000584887 DMRTA1Q5VZB9 504 aa13.61□□□□□ -0.23
TOP3A-219ENST00000584887 TMEM70Q9BUB7 260 aa13.61□□□□□ -0.23
TOP3A-219ENST00000584887 KRBOX1C9JBD0 128 aa13.6□□□□□ -0.23
TOP3A-219ENST00000584887 RHODO00212 210 aa13.6□□□□□ -0.23
TOP3A-219ENST00000584887 LECT2O14960 151 aa13.6□□□□□ -0.23
TOP3A-219ENST00000584887 ARPC5O15511 151 aa13.6□□□□□ -0.23
TOP3A-219ENST00000584887 CRIP1P50238 77 aa13.6□□□□□ -0.23
TOP3A-219ENST00000584887 CST9LP1Q5W188 147 aa13.6□□□□□ -0.23
TOP3A-219ENST00000584887 DAZ4Q86SG3 579 aaKnown RBP13.6□□□□□ -0.23
TOP3A-219ENST00000584887 DAZ3Q9NR90 486 aaKnown RBP13.6□□□□□ -0.23
TOP3A-219ENST00000584887 A0A087WWL8 130 aa13.59□□□□□ -0.23
TOP3A-219ENST00000584887 FAM229AH3BQW9 127 aa13.59□□□□□ -0.23
TOP3A-219ENST00000584887 WFDC2Q14508 124 aa13.59□□□□□ -0.23
TOP3A-219ENST00000584887 UFSP1Q6NVU6 142 aa13.59□□□□□ -0.23
TOP3A-219ENST00000584887 FMC1Q96HJ9 113 aa13.59□□□□□ -0.23
TOP3A-219ENST00000584887 ZFP30Q9Y2G7 519 aa13.59□□□□□ -0.23
TOP3A-219ENST00000584887 PHLDA3Q9Y5J5 127 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 204.2 ms