RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 ZNF345Q14585 488 aa12.22□□□□□ -0.45
SRSF1-208ENST00000584773 CST9LP1Q5W188 147 aa12.22□□□□□ -0.45
SRSF1-208ENST00000584773 Q6ZSN1 163 aa12.22□□□□□ -0.45
SRSF1-208ENST00000584773 HIST1H2BAQ96A08 127 aa12.22□□□□□ -0.45
SRSF1-208ENST00000584773 JPT2Q9H910 190 aa12.22□□□□□ -0.45
SRSF1-208ENST00000584773 FABP5P3A8MUU1 101 aa12.21□□□□□ -0.45
SRSF1-208ENST00000584773 M0R036 132 aa12.21□□□□□ -0.45
SRSF1-208ENST00000584773 SH2D1AO60880 128 aa12.21□□□□□ -0.45
SRSF1-208ENST00000584773 FAM213BQ8TBF2 198 aa12.21□□□□□ -0.45
SRSF1-208ENST00000584773 ZNF471Q9BX82 626 aaPredicted RBP12.21□□□□□ -0.45
SRSF1-208ENST00000584773 GRIFINA4D1Z8 144 aa12.2□□□□□ -0.46
SRSF1-208ENST00000584773 B4DEV8 164 aa12.2□□□□□ -0.46
SRSF1-208ENST00000584773 H3BVH4 76 aa12.2□□□□□ -0.46
SRSF1-208ENST00000584773 PAGE4O60829 102 aa12.2□□□□□ -0.46
SRSF1-208ENST00000584773 S100A4P26447 101 aaKnown RBP12.2□□□□□ -0.46
SRSF1-208ENST00000584773 HMSDA8MTL9 139 aa12.19□□□□□ -0.46
SRSF1-208ENST00000584773 BCL2L11O43521 198 aa12.19□□□□□ -0.46
SRSF1-208ENST00000584773 DNAH10OSP0CZ25 163 aa12.19□□□□□ -0.46
SRSF1-208ENST00000584773 ASIPP42127 132 aa12.19□□□□□ -0.46
SRSF1-208ENST00000584773 RHOHQ15669 191 aa12.19□□□□□ -0.46
SRSF1-208ENST00000584773 STOML3Q8TAV4 291 aa12.19□□□□□ -0.46
SRSF1-208ENST00000584773 PTH2Q96A98 100 aa12.19□□□□□ -0.46
SRSF1-208ENST00000584773 SAMD10Q9BYL1 202 aa12.19□□□□□ -0.46
SRSF1-208ENST00000584773 NKX6-2Q9C056 277 aaPredicted RBP12.19□□□□□ -0.46
SRSF1-208ENST00000584773 PARLQ9H300 379 aa12.19□□□□□ -0.46
SRSF1-208ENST00000584773 TMSB15BA0A087X1C1 80 aa12.18□□□□□ -0.46
SRSF1-208ENST00000584773 TRBV6-4A0A1B0GX49 114 aa12.18□□□□□ -0.46
SRSF1-208ENST00000584773 KRBOX1C9JBD0 128 aa12.18□□□□□ -0.46
SRSF1-208ENST00000584773 SEC11BP0C7V7 166 aa12.18□□□□□ -0.46
SRSF1-208ENST00000584773 UBE2G1P62253 170 aa12.18□□□□□ -0.46
SRSF1-208ENST00000584773 LGALSLQ3ZCW2 172 aaPredicted RBP12.18□□□□□ -0.46
SRSF1-208ENST00000584773 SFT2D1Q8WV19 159 aa12.18□□□□□ -0.46
SRSF1-208ENST00000584773 FMC1Q96HJ9 113 aa12.18□□□□□ -0.46
SRSF1-208ENST00000584773 PRADC1Q9BSG0 188 aa12.18□□□□□ -0.46
SRSF1-208ENST00000584773 Q9UF83 564 aa12.18□□□□□ -0.46
SRSF1-208ENST00000584773 KANTRA0A1W2PQU2 76 aa12.17□□□□□ -0.46
SRSF1-208ENST00000584773 AKR1C3P42330 323 aa12.17□□□□□ -0.46
SRSF1-208ENST00000584773 DMRTA1Q5VZB9 504 aa12.17□□□□□ -0.46
SRSF1-208ENST00000584773 MSRB1Q9NZV6 116 aa12.17□□□□□ -0.46
SRSF1-208ENST00000584773 A0A0D9SG52 128 aa12.16□□□□□ -0.46
SRSF1-208ENST00000584773 SCO2A0A1W2PP80 73 aa12.16□□□□□ -0.46
SRSF1-208ENST00000584773 LTAP01374 205 aa12.16□□□□□ -0.46
SRSF1-208ENST00000584773 CRYGDP07320 174 aa12.16□□□□□ -0.46
SRSF1-208ENST00000584773 ARMS2P0C7Q2 107 aa12.16□□□□□ -0.46
SRSF1-208ENST00000584773 EVI2AP22794 236 aa12.16□□□□□ -0.46
SRSF1-208ENST00000584773 COX8CQ7Z4L0 72 aa12.16□□□□□ -0.46
SRSF1-208ENST00000584773 MBD3L1Q8WWY6 194 aa12.16□□□□□ -0.46
SRSF1-208ENST00000584773 IL36BQ9NZH7 164 aa12.16□□□□□ -0.46
SRSF1-208ENST00000584773 ZFP30Q9Y2G7 519 aa12.16□□□□□ -0.46
SRSF1-208ENST00000584773 TRAV9-2A0A087WT02 112 aa12.15□□□□□ -0.46
SRSF1-208ENST00000584773 GAGE12JA6NER3 117 aa12.15□□□□□ -0.46
SRSF1-208ENST00000584773 CDK2AP2O75956 126 aa12.15□□□□□ -0.46
SRSF1-208ENST00000584773 TIRAPP58753 221 aa12.15□□□□□ -0.46
SRSF1-208ENST00000584773 GAGE1Q13065 139 aa12.15□□□□□ -0.46
SRSF1-208ENST00000584773 GAGE4Q13068 117 aa12.15□□□□□ -0.46
SRSF1-208ENST00000584773 GAGE5Q13069 117 aa12.15□□□□□ -0.46
SRSF1-208ENST00000584773 GAGE13Q4V321 117 aa12.15□□□□□ -0.46
SRSF1-208ENST00000584773 FAM162BQ5T6X4 162 aa12.15□□□□□ -0.46
SRSF1-208ENST00000584773 TMUB2Q71RG4 321 aa12.15□□□□□ -0.46
SRSF1-208ENST00000584773 SH2D6Q7Z4S9 175 aa12.15□□□□□ -0.46
SRSF1-208ENST00000584773 C14orf178Q8N769 122 aaPredicted RBP12.15□□□□□ -0.46
SRSF1-208ENST00000584773 IGHV3-38A0A0C4DH36 116 aa12.14□□□□□ -0.47
SRSF1-208ENST00000584773 TRBV6-1A0A0K0K1D8 114 aa12.14□□□□□ -0.47
SRSF1-208ENST00000584773 A8MWV9 139 aa12.14□□□□□ -0.47
SRSF1-208ENST00000584773 CIDEAO60543 219 aa12.14□□□□□ -0.47
SRSF1-208ENST00000584773 MGST1P10620 155 aaKnown RBP12.14□□□□□ -0.47
SRSF1-208ENST00000584773 ZNF674Q2M3X9 581 aa12.14□□□□□ -0.47
SRSF1-208ENST00000584773 OR10J3Q5JRS4 329 aa12.14□□□□□ -0.47
SRSF1-208ENST00000584773 UFSP1Q6NVU6 142 aa12.14□□□□□ -0.47
SRSF1-208ENST00000584773 A0A087WTM6 91 aa12.13□□□□□ -0.47
SRSF1-208ENST00000584773 UMAD1C9J7I0 102 aa12.13□□□□□ -0.47
SRSF1-208ENST00000584773 IGHV3-30P01768 117 aa12.13□□□□□ -0.47
SRSF1-208ENST00000584773 IGHV3-33P01772 117 aa12.13□□□□□ -0.47
SRSF1-208ENST00000584773 IGHV3-30-3P0DP02 117 aa12.13□□□□□ -0.47
SRSF1-208ENST00000584773 IGHV3-30-5P0DP03 117 aa12.13□□□□□ -0.47
SRSF1-208ENST00000584773 ERVFC1-1P60608 527 aa12.13□□□□□ -0.47
SRSF1-208ENST00000584773 NFE4Q86UQ8 179 aa12.13□□□□□ -0.47
SRSF1-208ENST00000584773 Q8N3U1 123 aa12.13□□□□□ -0.47
SRSF1-208ENST00000584773 ATP6V0E2Q8NHE4 81 aa12.13□□□□□ -0.47
SRSF1-208ENST00000584773 PFDN1O60925 122 aa12.12□□□□□ -0.47
SRSF1-208ENST00000584773 LINC00694P0DN24 101 aa12.12□□□□□ -0.47
SRSF1-208ENST00000584773 RPL19P84098 196 aaKnown RBP12.12□□□□□ -0.47
SRSF1-208ENST00000584773 LINC01559Q495D7 138 aa12.12□□□□□ -0.47
SRSF1-208ENST00000584773 DNLZQ5SXM8 178 aa12.12□□□□□ -0.47
SRSF1-208ENST00000584773 ZFP2Q6ZN57 461 aa12.12□□□□□ -0.47
SRSF1-208ENST00000584773 MAPKAPK5-AS1Q8N8E1 139 aa12.12□□□□□ -0.47
SRSF1-208ENST00000584773 TCEAL7Q9BRU2 100 aa12.12□□□□□ -0.47
SRSF1-208ENST00000584773 A0A087WWL8 130 aa12.11□□□□□ -0.47
SRSF1-208ENST00000584773 M0R381 172 aa12.11□□□□□ -0.47
SRSF1-208ENST00000584773 H2AFB1P0C5Y9 115 aa12.11□□□□□ -0.47
SRSF1-208ENST00000584773 CCL20P78556 96 aa12.11□□□□□ -0.47
SRSF1-208ENST00000584773 LINC01556Q5JQF7 62 aa12.11□□□□□ -0.47
SRSF1-208ENST00000584773 LELP1Q5T871 98 aa12.11□□□□□ -0.47
SRSF1-208ENST00000584773 FAM74A4Q5TZK3 123 aa12.11□□□□□ -0.47
SRSF1-208ENST00000584773 GTSF1LQ9H1H1 148 aa12.11□□□□□ -0.47
SRSF1-208ENST00000584773 SCRT2Q9NQ03 307 aa12.11□□□□□ -0.47
SRSF1-208ENST00000584773 TRAV8-6A0A0B4J262 113 aa12.11□□□□□ -0.47
SRSF1-208ENST00000584773 TPT1P13693 172 aaKnown RBP12.11□□□□□ -0.47
SRSF1-208ENST00000584773 PIK3CD-AS1Q5SR53 167 aa12.11□□□□□ -0.47
SRSF1-208ENST00000584773 SYT8Q8NBV8 401 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms