RNA–Protein interactions for RNA: ENST00000583217.1

EIF4A1-227, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-227ENST00000583217 HIST1H1AQ02539 215 aaPredicted RBP6.51□□□□□ -1.37
EIF4A1-227ENST00000583217 SMUG1Q53HV7 270 aa6.51□□□□□ -1.37
EIF4A1-227ENST00000583217 CT83Q5H943 113 aa6.51□□□□□ -1.37
EIF4A1-227ENST00000583217 IBA57Q5T440 356 aaKnown RBP6.51□□□□□ -1.37
EIF4A1-227ENST00000583217 GDF5OSQ5U4N7 250 aa6.51□□□□□ -1.37
EIF4A1-227ENST00000583217 C15orf54Q8N8G6 183 aa6.51□□□□□ -1.37
EIF4A1-227ENST00000583217 NUDT10Q8NFP7 164 aa6.51□□□□□ -1.37
EIF4A1-227ENST00000583217 OR4B1Q8NGF8 309 aa6.51□□□□□ -1.37
EIF4A1-227ENST00000583217 NUDT11Q96G61 164 aa6.51□□□□□ -1.37
EIF4A1-227ENST00000583217 CLUHP3Q96NS8 147 aa6.51□□□□□ -1.37
EIF4A1-227ENST00000583217 RNASE7Q9H1E1 156 aaKnown RBP6.51□□□□□ -1.37
EIF4A1-227ENST00000583217 KLLNB2CW77 178 aa6.5□□□□□ -1.37
EIF4A1-227ENST00000583217 EPM2AB3EWF7 344 aa6.5□□□□□ -1.37
EIF4A1-227ENST00000583217 HLA-DRB4P13762 266 aa6.5□□□□□ -1.37
EIF4A1-227ENST00000583217 ZNF80P51504 273 aaPredicted RBP6.5□□□□□ -1.37
EIF4A1-227ENST00000583217 FAM3BP58499 235 aaPredicted RBP6.5□□□□□ -1.37
EIF4A1-227ENST00000583217 FAM162BQ5T6X4 162 aa6.5□□□□□ -1.37
EIF4A1-227ENST00000583217 FAM222AQ5U5X8 452 aa6.5□□□□□ -1.37
EIF4A1-227ENST00000583217 AMTNQ6UX39 209 aa6.5□□□□□ -1.37
EIF4A1-227ENST00000583217 PYGO2Q9BRQ0 406 aa6.5□□□□□ -1.37
EIF4A1-227ENST00000583217 KRTAP1-5Q9BYS1 174 aa6.5□□□□□ -1.37
EIF4A1-227ENST00000583217 IL36BQ9NZH7 164 aa6.5□□□□□ -1.37
EIF4A1-227ENST00000583217 TMA7Q9Y2S6 64 aaKnown RBP6.5□□□□□ -1.37
EIF4A1-227ENST00000583217 HLA-DRB4X5D2U9 266 aa6.5□□□□□ -1.37
EIF4A1-227ENST00000583217 TRBV24-1A0A075B6N3 115 aa6.49□□□□□ -1.37
EIF4A1-227ENST00000583217 TRAV9-1A0A075B6T8 112 aa6.49□□□□□ -1.37
EIF4A1-227ENST00000583217 SMIM27A0A1W2PRY6 76 aa6.49□□□□□ -1.37
EIF4A1-227ENST00000583217 COLCA2A8K830 154 aa6.49□□□□□ -1.37
EIF4A1-227ENST00000583217 GATCO43716 136 aaKnown RBP6.49□□□□□ -1.37
EIF4A1-227ENST00000583217 SH2D1AO60880 128 aa6.49□□□□□ -1.37
EIF4A1-227ENST00000583217 P01737 135 aa6.49□□□□□ -1.37
EIF4A1-227ENST00000583217 HTN3P15516 51 aa6.49□□□□□ -1.37
EIF4A1-227ENST00000583217 ELOBQ15370 118 aa6.49□□□□□ -1.37
EIF4A1-227ENST00000583217 PRR9Q5T870 116 aa6.49□□□□□ -1.37
EIF4A1-227ENST00000583217 PRR27Q6MZM9 219 aa6.49□□□□□ -1.37
EIF4A1-227ENST00000583217 EBLN2Q6P2I7 272 aa6.49□□□□□ -1.37
EIF4A1-227ENST00000583217 RPP21Q9H633 154 aaKnown RBP6.49□□□□□ -1.37
EIF4A1-227ENST00000583217 LOC105371267A0A1B0GV96 52 aa6.48□□□□□ -1.37
EIF4A1-227ENST00000583217 FAM231BA6NCW3 169 aa6.48□□□□□ -1.37
EIF4A1-227ENST00000583217 FABP5P3A8MUU1 101 aa6.48□□□□□ -1.37
EIF4A1-227ENST00000583217 ZNF705GA8MUZ8 300 aaPredicted RBP6.48□□□□□ -1.37
EIF4A1-227ENST00000583217 LEPP41159 167 aa6.48□□□□□ -1.37
EIF4A1-227ENST00000583217 XGP55808 180 aa6.48□□□□□ -1.37
EIF4A1-227ENST00000583217 LINC01559Q495D7 138 aa6.48□□□□□ -1.37
EIF4A1-227ENST00000583217 Q6AWC8 147 aa6.48□□□□□ -1.37
EIF4A1-227ENST00000583217 TSKUQ8WUA8 353 aa6.48□□□□□ -1.37
EIF4A1-227ENST00000583217 DAZAP1Q96EP5 407 aaKnown RBP6.48□□□□□ -1.37
EIF4A1-227ENST00000583217 C1QTNF4Q9BXJ3 329 aa6.48□□□□□ -1.37
EIF4A1-227ENST00000583217 GFRA4Q9GZZ7 299 aa6.48□□□□□ -1.37
EIF4A1-227ENST00000583217 TMEM189A5PLL7 270 aa6.47□□□□□ -1.37
EIF4A1-227ENST00000583217 SMIM9A6NGZ8 99 aa6.47□□□□□ -1.37
EIF4A1-227ENST00000583217 A8MWL6 223 aa6.47□□□□□ -1.37
EIF4A1-227ENST00000583217 TYMSP04818 313 aa6.47□□□□□ -1.37
EIF4A1-227ENST00000583217 CXCL1P09341 107 aa6.47□□□□□ -1.37
EIF4A1-227ENST00000583217 S100PP25815 95 aa6.47□□□□□ -1.37
EIF4A1-227ENST00000583217 FOXA3P55318 350 aaPredicted RBP6.47□□□□□ -1.37
EIF4A1-227ENST00000583217 FXYD7P58549 80 aa6.47□□□□□ -1.37
EIF4A1-227ENST00000583217 KCNIP4Q6PIL6 250 aa6.47□□□□□ -1.37
EIF4A1-227ENST00000583217 C1orf158Q8N1D5 194 aa6.47□□□□□ -1.37
EIF4A1-227ENST00000583217 LINC00588Q9Y4M8 146 aa6.47□□□□□ -1.37
EIF4A1-227ENST00000583217 IGHV3OR16-12A0A075B7B8 117 aa6.46□□□□□ -1.38
EIF4A1-227ENST00000583217 TRAV21A0A0B4J279 112 aa6.46□□□□□ -1.38
EIF4A1-227ENST00000583217 ZNF324O75467 553 aaPredicted RBP6.46□□□□□ -1.38
EIF4A1-227ENST00000583217 TSPOP30536 169 aa6.46□□□□□ -1.38
EIF4A1-227ENST00000583217 CDKN1BP46527 198 aa6.46□□□□□ -1.38
EIF4A1-227ENST00000583217 RPS20P60866 119 aaKnown RBP6.46□□□□□ -1.38
EIF4A1-227ENST00000583217 KIR3DS1Q14943 382 aa6.46□□□□□ -1.38
EIF4A1-227ENST00000583217 OR2D3Q8NGH3 330 aa6.46□□□□□ -1.38
EIF4A1-227ENST00000583217 BTF3L4Q96K17 158 aa6.46□□□□□ -1.38
EIF4A1-227ENST00000583217 C11orf21Q9P2W6 132 aa6.46□□□□□ -1.38
EIF4A1-227ENST00000583217 URGCP-MRPS24S4R325 110 aa6.46□□□□□ -1.38
EIF4A1-227ENST00000583217 TGIF2-C20orf24A0A0A6YYL0 155 aa6.45□□□□□ -1.38
EIF4A1-227ENST00000583217 IGKV3D-20A0A0C4DH25 116 aa6.45□□□□□ -1.38
EIF4A1-227ENST00000583217 XKRY2A2RUG3 117 aa6.45□□□□□ -1.38
EIF4A1-227ENST00000583217 C7orf71A4D174 169 aa6.45□□□□□ -1.38
EIF4A1-227ENST00000583217 CRXO43186 299 aaPredicted RBP6.45□□□□□ -1.38
EIF4A1-227ENST00000583217 IGKV3-20P01619 116 aa6.45□□□□□ -1.38
EIF4A1-227ENST00000583217 PRM2P04554 102 aa6.45□□□□□ -1.38
EIF4A1-227ENST00000583217 GPX1P07203 203 aa6.45□□□□□ -1.38
EIF4A1-227ENST00000583217 FUSP35637 526 aaKnown RBP eCLIP6.45□□□□□ -1.38
EIF4A1-227ENST00000583217 NUTF2P61970 127 aaKnown RBP6.45□□□□□ -1.38
EIF4A1-227ENST00000583217 RPL19P84098 196 aaKnown RBP6.45□□□□□ -1.38
EIF4A1-227ENST00000583217 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.45□□□□□ -1.38
EIF4A1-227ENST00000583217 C15orf53Q8NAA6 179 aa6.45□□□□□ -1.38
EIF4A1-227ENST00000583217 GTSF1Q8WW33 167 aa6.45□□□□□ -1.38
EIF4A1-227ENST00000583217 NAT8BQ9UHF3 227 aa6.45□□□□□ -1.38
EIF4A1-227ENST00000583217 TEX48A0A1B0GUV7 120 aa6.44□□□□□ -1.38
EIF4A1-227ENST00000583217 A0A1W2PPQ1 181 aa6.44□□□□□ -1.38
EIF4A1-227ENST00000583217 HIGD1CA8MV81 97 aa6.44□□□□□ -1.38
EIF4A1-227ENST00000583217 M0R2Z0 102 aa6.44□□□□□ -1.38
EIF4A1-227ENST00000583217 IGLC6P0CF74 106 aa6.44□□□□□ -1.38
EIF4A1-227ENST00000583217 BTF3P20290 206 aaKnown RBP6.44□□□□□ -1.38
EIF4A1-227ENST00000583217 RAB5AP20339 215 aa6.44□□□□□ -1.38
EIF4A1-227ENST00000583217 RNASE4P34096 147 aaKnown RBP6.44□□□□□ -1.38
EIF4A1-227ENST00000583217 SPINK13Q1W4C9 94 aa6.44□□□□□ -1.38
EIF4A1-227ENST00000583217 TDRG1Q3Y452 100 aa6.44□□□□□ -1.38
EIF4A1-227ENST00000583217 DNLZQ5SXM8 178 aa6.44□□□□□ -1.38
EIF4A1-227ENST00000583217 Q5VSD8 79 aa6.44□□□□□ -1.38
EIF4A1-227ENST00000583217 GFI1BQ5VTD9 330 aa6.44□□□□□ -1.38
EIF4A1-227ENST00000583217 Q6ZQT7 251 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms